FFCP PHASE1:Mm9::chr3:137902622..137902629,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=8|UniProt=|association_with_transcript=0bp_to_uc008rnc.1_5end|description=CAGE_peak_4_at_uc008rnc.1_5end|id=chr3:137902622..137902629,-|ontology_enrichment_celltype=CL:0000181!2.92e-16!5;CL:0000417!2.92e-16!5;CL:0000668!2.92e-16!5;CL:0000412!2.92e-16!5;CL:0000182!2.92e-16!5;CL:0000414!1.85e-07!11|ontology_enrichment_celltype_v019_2=CL:0000182,1.82e-26,5;CL:0000057,1.73e-09,1;CL:0000632,1.73e-09,1;CL:0000223,7.53e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!8.87e-21!22;UBERON:0007499!8.87e-21!22;UBERON:0006925!8.87e-21!22;UBERON:0009497!8.87e-21!22;UBERON:0000015!8.87e-21!22;UBERON:0002423!8.87e-21!22;UBERON:0006235!8.87e-21!22;UBERON:0008835!8.87e-21!22;UBERON:0003894!8.87e-21!22;UBERON:0004161!8.87e-21!22;UBERON:0008836!8.87e-21!22;UBERON:0009854!8.20e-20!23;UBERON:0009856!8.20e-20!23;UBERON:0002365!4.12e-18!25;UBERON:0002330!4.12e-18!25;UBERON:0005172!1.91e-14!49;UBERON:0005173!1.91e-14!49;UBERON:0002417!1.91e-14!49;UBERON:0000916!1.91e-14!49;UBERON:0005256!8.59e-11!47;UBERON:0009569!3.42e-10!66;UBERON:0001962!7.15e-10!2;UBERON:0001961!7.15e-10!2;UBERON:0001744!7.15e-10!2;UBERON:0003914!6.21e-09!47;UBERON:0005057!4.11e-08!51;UBERON:0002368!4.43e-08!60;UBERON:0002405!4.85e-08!70;UBERON:0005177!1.92e-07!85;UBERON:0003929!2.07e-07!55;UBERON:0002530!2.52e-07!65;UBERON:0002465!7.29e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.71e-29,22;UBERON:0007499,5.71e-29,22;UBERON:0006925,5.71e-29,22;UBERON:0009497,5.71e-29,22;UBERON:0000015,5.71e-29,22;UBERON:0002423,5.71e-29,22;UBERON:0006235,5.71e-29,22;UBERON:0008835,5.71e-29,22;UBERON:0003894,5.71e-29,22;UBERON:0004161,5.71e-29,22;UBERON:0008836,5.71e-29,22;UBERON:0009854,1.08e-27,23;UBERON:0009856,1.08e-27,23;UBERON:0002365,1.93e-25,25;UBERON:0002330,1.93e-25,25;UBERON:0005256,6.74e-14,45;UBERON:0003914,2.79e-13,47;UBERON:0005172,1.03e-12,49;UBERON:0005173,1.03e-12,49;UBERON:0002417,1.03e-12,49;UBERON:0000916,1.03e-12,49;UBERON:0003929,2.95e-11,55;UBERON:0002368,2.90e-10,60;UBERON:0003104,4.39e-10,61;UBERON:0009142,4.39e-10,61;UBERON:0002530,2.02e-09,65;UBERON:0000490,2.88e-09,66;UBERON:0009569,2.88e-09,66;UBERON:0005911,7.81e-09,69;UBERON:0000949,1.95e-08,72;UBERON:0005177,1.27e-07,79;UBERON:0001041,1.62e-07,80|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0459342777394,6.79971333707751,8.63525106620507,16.8941868536394,14.3368603871147,5.05599912474307,0,0,0,0,0,0,0,0,0,0,3.4255163915718,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210407459670956,0.0632365371242573,0,0,0,15.1190839814446,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,4.2938409251009,4.66433275156972,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@uc008rnc.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc008rnc.1_5end | |||
|cluster_id=chr3:137902622..137902629,- | |||
|description=CAGE_peak_4_at_uc008rnc.1_5end | |||
|id=chr3:137902622..137902629,- | |||
|ontology_enrichment_celltype=CL:0000181!2.92e-16!5;CL:0000417!2.92e-16!5;CL:0000668!2.92e-16!5;CL:0000412!2.92e-16!5;CL:0000182!2.92e-16!5;CL:0000414!1.85e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.82e-26,5;CL:0000057,1.73e-09,1;CL:0000632,1.73e-09,1;CL:0000223,7.53e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.87e-21!22;UBERON:0007499!8.87e-21!22;UBERON:0006925!8.87e-21!22;UBERON:0009497!8.87e-21!22;UBERON:0000015!8.87e-21!22;UBERON:0002423!8.87e-21!22;UBERON:0006235!8.87e-21!22;UBERON:0008835!8.87e-21!22;UBERON:0003894!8.87e-21!22;UBERON:0004161!8.87e-21!22;UBERON:0008836!8.87e-21!22;UBERON:0009854!8.20e-20!23;UBERON:0009856!8.20e-20!23;UBERON:0002365!4.12e-18!25;UBERON:0002330!4.12e-18!25;UBERON:0005172!1.91e-14!49;UBERON:0005173!1.91e-14!49;UBERON:0002417!1.91e-14!49;UBERON:0000916!1.91e-14!49;UBERON:0005256!8.59e-11!47;UBERON:0009569!3.42e-10!66;UBERON:0001962!7.15e-10!2;UBERON:0001961!7.15e-10!2;UBERON:0001744!7.15e-10!2;UBERON:0003914!6.21e-09!47;UBERON:0005057!4.11e-08!51;UBERON:0002368!4.43e-08!60;UBERON:0002405!4.85e-08!70;UBERON:0005177!1.92e-07!85;UBERON:0003929!2.07e-07!55;UBERON:0002530!2.52e-07!65;UBERON:0002465!7.29e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.71e-29,22;UBERON:0007499,5.71e-29,22;UBERON:0006925,5.71e-29,22;UBERON:0009497,5.71e-29,22;UBERON:0000015,5.71e-29,22;UBERON:0002423,5.71e-29,22;UBERON:0006235,5.71e-29,22;UBERON:0008835,5.71e-29,22;UBERON:0003894,5.71e-29,22;UBERON:0004161,5.71e-29,22;UBERON:0008836,5.71e-29,22;UBERON:0009854,1.08e-27,23;UBERON:0009856,1.08e-27,23;UBERON:0002365,1.93e-25,25;UBERON:0002330,1.93e-25,25;UBERON:0005256,6.74e-14,45;UBERON:0003914,2.79e-13,47;UBERON:0005172,1.03e-12,49;UBERON:0005173,1.03e-12,49;UBERON:0002417,1.03e-12,49;UBERON:0000916,1.03e-12,49;UBERON:0003929,2.95e-11,55;UBERON:0002368,2.90e-10,60;UBERON:0003104,4.39e-10,61;UBERON:0009142,4.39e-10,61;UBERON:0002530,2.02e-09,65;UBERON:0000490,2.88e-09,66;UBERON:0009569,2.88e-09,66;UBERON:0005911,7.81e-09,69;UBERON:0000949,1.95e-08,72;UBERON:0005177,1.27e-07,79;UBERON:0001041,1.62e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0459342777394,6.79971333707751,8.63525106620507,16.8941868536394,14.3368603871147,5.05599912474307,0,0,0,0,0,0,0,0,0,0,3.4255163915718,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210407459670956,0.0632365371242573,0,0,0,15.1190839814446,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,4.2938409251009,4.66433275156972,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@uc008rnc.1 | |||
}} |
Latest revision as of 02:53, 6 August 2015
Short description: | p4@uc008rnc.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_uc008rnc.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_uc008rnc.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.82e-26 | 5 |
fibroblast | 1.73e-09 | 1 |
hepatic stellate cell | 1.73e-09 | 1 |
endodermal cell | 7.53e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 5.71e-29 | 22 |
epithelial sac | 5.71e-29 | 22 |
digestive gland | 5.71e-29 | 22 |
epithelium of foregut-midgut junction | 5.71e-29 | 22 |
anatomical boundary | 5.71e-29 | 22 |
hepatobiliary system | 5.71e-29 | 22 |
foregut-midgut junction | 5.71e-29 | 22 |
hepatic diverticulum | 5.71e-29 | 22 |
liver primordium | 5.71e-29 | 22 |
septum transversum | 5.71e-29 | 22 |
liver bud | 5.71e-29 | 22 |
digestive tract diverticulum | 1.08e-27 | 23 |
sac | 1.08e-27 | 23 |
exocrine gland | 1.93e-25 | 25 |
exocrine system | 1.93e-25 | 25 |
trunk mesenchyme | 6.74e-14 | 45 |
epithelial tube | 2.79e-13 | 47 |
abdomen element | 1.03e-12 | 49 |
abdominal segment element | 1.03e-12 | 49 |
abdominal segment of trunk | 1.03e-12 | 49 |
abdomen | 1.03e-12 | 49 |
gut epithelium | 2.95e-11 | 55 |
endocrine gland | 2.90e-10 | 60 |
mesenchyme | 4.39e-10 | 61 |
entire embryonic mesenchyme | 4.39e-10 | 61 |
gland | 2.02e-09 | 65 |
unilaminar epithelium | 2.88e-09 | 66 |
subdivision of trunk | 2.88e-09 | 66 |
endo-epithelium | 7.81e-09 | 69 |
endocrine system | 1.95e-08 | 72 |
trunk region element | 1.27e-07 | 79 |
foregut | 1.62e-07 | 80 |