FFCP PHASE1:Mm9::chr5:122581952..122581957,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=386|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:122581952..122581957,+|id=chr5:122581952..122581957,+|ontology_enrichment_celltype=CL:0000791!9.55e-07!9;CL:0000789!9.55e-07!9;CL:0002420!9.55e-07!9;CL:0002419!9.55e-07!9;CL:0000790!9.55e-07!9|ontology_enrichment_celltype_v019_2=CL:0000239,2.69e-20,6;CL:0000677,2.69e-20,6;CL:0000584,2.69e-20,6;CL:0000075,1.88e-17,7;CL:0002563,1.19e-13,9;CL:0002251,1.19e-13,9;CL:0000223,2.86e-09,20;CL:0000625,6.23e-09,1;CL:0002076,2.70e-08,15;CL:0000213,2.89e-08,1;CL:0002078,2.89e-08,1;CL:0000115,2.89e-08,1;CL:0002262,2.89e-08,1;CL:1000398,2.89e-08,1;CL:0000066,2.08e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!9.83e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.45e-14,13;UBERON:0001262,2.45e-14,13;UBERON:0004786,2.45e-14,13;UBERON:0003350,1.19e-13,9;UBERON:0004808,1.19e-13,9;UBERON:0001277,1.19e-13,9;UBERON:0000344,1.97e-12,15;UBERON:0000485,3.19e-11,11;UBERON:0002394,2.89e-08,1;UBERON:0001281,2.89e-08,1;UBERON:0000353,2.89e-08,1;UBERON:0003497,2.89e-08,1;UBERON:0003909,2.89e-08,1;UBERON:0003928,2.89e-08,1;UBERON:0003835,2.89e-08,1;UBERON:0003513,2.89e-08,1;UBERON:0001280,2.89e-08,1;UBERON:0004647,2.89e-08,1;UBERON:0002294,2.89e-08,1;UBERON:0001173,2.89e-08,1;UBERON:0004912,2.89e-08,1;UBERON:0005171,2.89e-08,1;UBERON:0004923,9.18e-08,24|phase1_expression=0,2.44282785347553,1.81999695755814,6.35174843744343,2.50447864973174,0,0,0.903863264091034,0.422366166455,0,0.34243593645101,0.159544317990673,0.684802919724823,0.524522414513984,0,0,0,0.315462165358238,0,0.42438965179803,0.0850432901510698,0,0,0.159992422793407,0.45881856213434,0.57423196411502,0,0,0,0.504060259519861,0.886922042621219,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0,0,0.7813353445238,0.523523743973798,4.1176204162171,0.683045484958446,2.42755176515577,0,0,0,0,0,0,0,0,0,0.838913030288682,2.17608642603403,2.68875039313971,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0.766371165625774,0.599075622529601,0.599902730993408,0.381210681219194,0.149790639404823,0,0,0.173824320192276,0,0,0,0,0,0.252722758433675,0,0,0.229902104433473,0,0.150704817835715,0.204109497453984,0.12811372028485,0.562210347358373,0.517406741478031,0,0,0,0,0.278047249225598,0.696504333044333,0,0,0,0.51469581422943,0.852490498186778,0,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0,0,0,0,0,0.210289948564127,0,1.65209391491899,0.528901133327089,0,0,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.238744688006273,0,0.582961673259701,0,0,0.206386867963223,0,0.188368457004691,0,0.228778173206523,0.849892149969277,0.69975726161829,1.24379976423981,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0,0,0,0,0.120195449519969,0,0.201932899896295,0.381034033274999,0.201652370273681,0,0.192423683280659,0.935015217452552,0,0.221985953374065,0.0897138566094757,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0.354951612318675,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr5:122581952..122581957,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=386 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:122581952..122581957,+ | |||
|description=CAGE_peak_at_chr5:122581952..122581957,+ | |||
|id=chr5:122581952..122581957,+ | |||
|ontology_enrichment_celltype=CL:0000791!9.55e-07!9;CL:0000789!9.55e-07!9;CL:0002420!9.55e-07!9;CL:0002419!9.55e-07!9;CL:0000790!9.55e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.69e-20,6;CL:0000677,2.69e-20,6;CL:0000584,2.69e-20,6;CL:0000075,1.88e-17,7;CL:0002563,1.19e-13,9;CL:0002251,1.19e-13,9;CL:0000223,2.86e-09,20;CL:0000625,6.23e-09,1;CL:0002076,2.70e-08,15;CL:0000213,2.89e-08,1;CL:0002078,2.89e-08,1;CL:0000115,2.89e-08,1;CL:0002262,2.89e-08,1;CL:1000398,2.89e-08,1;CL:0000066,2.08e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.83e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.45e-14,13;UBERON:0001262,2.45e-14,13;UBERON:0004786,2.45e-14,13;UBERON:0003350,1.19e-13,9;UBERON:0004808,1.19e-13,9;UBERON:0001277,1.19e-13,9;UBERON:0000344,1.97e-12,15;UBERON:0000485,3.19e-11,11;UBERON:0002394,2.89e-08,1;UBERON:0001281,2.89e-08,1;UBERON:0000353,2.89e-08,1;UBERON:0003497,2.89e-08,1;UBERON:0003909,2.89e-08,1;UBERON:0003928,2.89e-08,1;UBERON:0003835,2.89e-08,1;UBERON:0003513,2.89e-08,1;UBERON:0001280,2.89e-08,1;UBERON:0004647,2.89e-08,1;UBERON:0002294,2.89e-08,1;UBERON:0001173,2.89e-08,1;UBERON:0004912,2.89e-08,1;UBERON:0005171,2.89e-08,1;UBERON:0004923,9.18e-08,24 | |||
|phase1_expression=0,2.44282785347553,1.81999695755814,6.35174843744343,2.50447864973174,0,0,0.903863264091034,0.422366166455,0,0.34243593645101,0.159544317990673,0.684802919724823,0.524522414513984,0,0,0,0.315462165358238,0,0.42438965179803,0.0850432901510698,0,0,0.159992422793407,0.45881856213434,0.57423196411502,0,0,0,0.504060259519861,0.886922042621219,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0,0,0.7813353445238,0.523523743973798,4.1176204162171,0.683045484958446,2.42755176515577,0,0,0,0,0,0,0,0,0,0.838913030288682,2.17608642603403,2.68875039313971,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0.766371165625774,0.599075622529601,0.599902730993408,0.381210681219194,0.149790639404823,0,0,0.173824320192276,0,0,0,0,0,0.252722758433675,0,0,0.229902104433473,0,0.150704817835715,0.204109497453984,0.12811372028485,0.562210347358373,0.517406741478031,0,0,0,0,0.278047249225598,0.696504333044333,0,0,0,0.51469581422943,0.852490498186778,0,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0,0,0,0,0,0.210289948564127,0,1.65209391491899,0.528901133327089,0,0,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.238744688006273,0,0.582961673259701,0,0,0.206386867963223,0,0.188368457004691,0,0.228778173206523,0.849892149969277,0.69975726161829,1.24379976423981,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0,0,0,0,0.120195449519969,0,0.201932899896295,0.381034033274999,0.201652370273681,0,0.192423683280659,0.935015217452552,0,0.221985953374065,0.0897138566094757,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0.354951612318675,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr5:122581952..122581957,+ | |||
}} |
Latest revision as of 05:26, 6 August 2015
Short description: | p@chr5:122581952..122581957, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:122581952..122581957, + |
Coexpression cluster: | MCL_coexpression_mm9:386 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.69e-20 | 6 |
gut absorptive cell | 2.69e-20 | 6 |
enterocyte | 2.69e-20 | 6 |
columnar/cuboidal epithelial cell | 1.88e-17 | 7 |
intestinal epithelial cell | 1.19e-13 | 9 |
epithelial cell of alimentary canal | 1.19e-13 | 9 |
endodermal cell | 2.86e-09 | 20 |
CD8-positive, alpha-beta T cell | 6.23e-09 | 1 |
endo-epithelial cell | 2.70e-08 | 15 |
lining cell | 2.89e-08 | 1 |
meso-epithelial cell | 2.89e-08 | 1 |
endothelial cell | 2.89e-08 | 1 |
endothelial cell of sinusoid | 2.89e-08 | 1 |
endothelial cell of hepatic sinusoid | 2.89e-08 | 1 |
epithelial cell | 2.08e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.45e-14 | 13 |
wall of intestine | 2.45e-14 | 13 |
gastrointestinal system mucosa | 2.45e-14 | 13 |
epithelium of mucosa | 1.19e-13 | 9 |
gastrointestinal system epithelium | 1.19e-13 | 9 |
intestinal epithelium | 1.19e-13 | 9 |
mucosa | 1.97e-12 | 15 |
simple columnar epithelium | 3.19e-11 | 11 |
bile duct | 2.89e-08 | 1 |
hepatic sinusoid | 2.89e-08 | 1 |
parenchyma | 2.89e-08 | 1 |
abdomen blood vessel | 2.89e-08 | 1 |
sinusoid | 2.89e-08 | 1 |
digestive system duct | 2.89e-08 | 1 |
abdominal segment blood vessel | 2.89e-08 | 1 |
trunk blood vessel | 2.89e-08 | 1 |
liver parenchyma | 2.89e-08 | 1 |
liver lobule | 2.89e-08 | 1 |
biliary system | 2.89e-08 | 1 |
biliary tree | 2.89e-08 | 1 |
biliary bud | 2.89e-08 | 1 |
hepatic duct | 2.89e-08 | 1 |
organ component layer | 9.18e-08 | 24 |