FFCP PHASE1:Mm9::chr6:86039679..86039682,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=15|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:86039679..86039682,+|id=chr6:86039679..86039682,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,6.38e-15,3;CL:0002006,6.38e-15,3;CL:0002024,6.38e-15,3;CL:0000050,1.50e-08,9;CL:0000553,1.04e-07,6;CL:0000556,1.04e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.51e-09!71;UBERON:0003075!2.51e-09!71;UBERON:0007284!2.51e-09!71;UBERON:0000033!1.63e-08!63;UBERON:0002020!2.67e-08!34;UBERON:0000955!4.01e-08!50;UBERON:0006238!4.01e-08!50;UBERON:0001049!5.72e-08!52;UBERON:0005068!5.72e-08!52;UBERON:0006241!5.72e-08!52;UBERON:0007135!5.72e-08!52;UBERON:0001017!7.14e-08!73;UBERON:0005743!7.14e-08!73;UBERON:0000073!8.68e-08!75;UBERON:0001016!8.68e-08!75;UBERON:0002616!1.36e-07!49;UBERON:0004121!2.12e-07!102;UBERON:0000924!2.12e-07!102;UBERON:0006601!2.12e-07!102;UBERON:0002791!6.60e-07!29;UBERON:0003528!6.60e-07!29;UBERON:0001893!6.60e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.10e-13,6;UBERON:0004457,3.10e-13,6;UBERON:0000042,3.10e-13,6;UBERON:0004854,3.10e-13,6;UBERON:0009034,3.10e-13,6;UBERON:0002095,3.10e-13,6;UBERON:0004782,3.10e-13,6;UBERON:0003281,3.10e-13,6;UBERON:0009664,3.10e-13,6;UBERON:0002296,3.10e-13,6;UBERON:0005602,3.10e-13,6;UBERON:0001179,3.10e-13,6;UBERON:0006293,3.10e-13,6;UBERON:0003887,5.37e-08,10;UBERON:0002021,1.44e-07,10;UBERON:0000411,1.44e-07,10;UBERON:0001950,1.44e-07,10|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,4.45445588257617,1.39912375625629,0,0,0.42438965179803,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0.635030673459631,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0.285650984403804,0,0.122490799214954,0.670918297127655,0,4.40463523997555,0.127687338085188,0.307213066512487,0.131886287730194,0.274462930807229,0.52091337055676,0,0.56276261003168,0,0.294628585473668,0.284743361598206,0.745597783301202,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0,0,0.884610551949874,0,0,0,0,0.878342391034642,1.67557365450764,0,0,0,0,0.449371918214468,0,0.502617408451458,0.695297280769106,0.511430914660661,0,0.486723789203273,0.101839363850316,0.497627882440372,0,0.210441855886474,0.260240885925407,0,0,0.30140963567143,0.204109497453984,0.384341160854549,0,0.258703370739016,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0.630869845692382,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,1.00107063429656,0.786235980452812,2.02375901146368,1.62288097110802,2.17059443777175,0.50925170356284,1.15078454980324,0.648540907100142,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0.292255857911312,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0.18542530201051,1.53783792718067,0,0.925972636848558,3.01389531207506,3.41735569302563,2.0590035588587,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73260649706906,0,0,1.6942555278512,0.460325236507177,0.572895513439397,1.3748254587495,0,0,0,1.80128481289688,0.453142408984205,1.03552062350364,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.320125762024346,0.229741875822453,0.952587382566147,0.347652977834566,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.953744759789284,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0.526139422875686,0,0,0.474540072496697,0.394017929502254,0,0.309873682371932,0,0,0.467863216890817,0,0,0,0|short_description=p@chr6:86039679..86039682,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:86039679..86039682,+ | |||
|description=CAGE_peak_at_chr6:86039679..86039682,+ | |||
|id=chr6:86039679..86039682,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,6.38e-15,3;CL:0002006,6.38e-15,3;CL:0002024,6.38e-15,3;CL:0000050,1.50e-08,9;CL:0000553,1.04e-07,6;CL:0000556,1.04e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.51e-09!71;UBERON:0003075!2.51e-09!71;UBERON:0007284!2.51e-09!71;UBERON:0000033!1.63e-08!63;UBERON:0002020!2.67e-08!34;UBERON:0000955!4.01e-08!50;UBERON:0006238!4.01e-08!50;UBERON:0001049!5.72e-08!52;UBERON:0005068!5.72e-08!52;UBERON:0006241!5.72e-08!52;UBERON:0007135!5.72e-08!52;UBERON:0001017!7.14e-08!73;UBERON:0005743!7.14e-08!73;UBERON:0000073!8.68e-08!75;UBERON:0001016!8.68e-08!75;UBERON:0002616!1.36e-07!49;UBERON:0004121!2.12e-07!102;UBERON:0000924!2.12e-07!102;UBERON:0006601!2.12e-07!102;UBERON:0002791!6.60e-07!29;UBERON:0003528!6.60e-07!29;UBERON:0001893!6.60e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.10e-13,6;UBERON:0004457,3.10e-13,6;UBERON:0000042,3.10e-13,6;UBERON:0004854,3.10e-13,6;UBERON:0009034,3.10e-13,6;UBERON:0002095,3.10e-13,6;UBERON:0004782,3.10e-13,6;UBERON:0003281,3.10e-13,6;UBERON:0009664,3.10e-13,6;UBERON:0002296,3.10e-13,6;UBERON:0005602,3.10e-13,6;UBERON:0001179,3.10e-13,6;UBERON:0006293,3.10e-13,6;UBERON:0003887,5.37e-08,10;UBERON:0002021,1.44e-07,10;UBERON:0000411,1.44e-07,10;UBERON:0001950,1.44e-07,10 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,4.45445588257617,1.39912375625629,0,0,0.42438965179803,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0.635030673459631,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0.285650984403804,0,0.122490799214954,0.670918297127655,0,4.40463523997555,0.127687338085188,0.307213066512487,0.131886287730194,0.274462930807229,0.52091337055676,0,0.56276261003168,0,0.294628585473668,0.284743361598206,0.745597783301202,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0,0,0.884610551949874,0,0,0,0,0.878342391034642,1.67557365450764,0,0,0,0,0.449371918214468,0,0.502617408451458,0.695297280769106,0.511430914660661,0,0.486723789203273,0.101839363850316,0.497627882440372,0,0.210441855886474,0.260240885925407,0,0,0.30140963567143,0.204109497453984,0.384341160854549,0,0.258703370739016,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0.630869845692382,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,1.00107063429656,0.786235980452812,2.02375901146368,1.62288097110802,2.17059443777175,0.50925170356284,1.15078454980324,0.648540907100142,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0.292255857911312,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0.18542530201051,1.53783792718067,0,0.925972636848558,3.01389531207506,3.41735569302563,2.0590035588587,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73260649706906,0,0,1.6942555278512,0.460325236507177,0.572895513439397,1.3748254587495,0,0,0,1.80128481289688,0.453142408984205,1.03552062350364,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.320125762024346,0.229741875822453,0.952587382566147,0.347652977834566,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.953744759789284,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0.526139422875686,0,0,0.474540072496697,0.394017929502254,0,0.309873682371932,0,0,0.467863216890817,0,0,0,0 | |||
|short_description=p@chr6:86039679..86039682,+ | |||
}} |
Latest revision as of 05:36, 6 August 2015
Short description: | p@chr6:86039679..86039682, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:86039679..86039682, + |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 6.38e-15 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 6.38e-15 | 3 |
Kit-positive megakaryocyte progenitor cell | 6.38e-15 | 3 |
megakaryocyte-erythroid progenitor cell | 1.50e-08 | 9 |
megakaryocyte progenitor cell | 1.04e-07 | 6 |
megakaryocyte | 1.04e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.10e-13 | 6 |
cavity lining | 3.10e-13 | 6 |
serous membrane | 3.10e-13 | 6 |
gastrointestinal system mesentery | 3.10e-13 | 6 |
stomach region | 3.10e-13 | 6 |
mesentery | 3.10e-13 | 6 |
gastrointestinal system serosa | 3.10e-13 | 6 |
mesentery of stomach | 3.10e-13 | 6 |
gut mesentery | 3.10e-13 | 6 |
dorsal mesentery | 3.10e-13 | 6 |
dorsal mesogastrium | 3.10e-13 | 6 |
peritoneal cavity | 3.10e-13 | 6 |
spleen primordium | 3.10e-13 | 6 |
intraembryonic coelom | 5.37e-08 | 10 |
occipital lobe | 1.44e-07 | 10 |
visual cortex | 1.44e-07 | 10 |
neocortex | 1.44e-07 | 10 |