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FFCP PHASE1:Mm9::chr11:60624607..60624712,-: Difference between revisions

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{{FFCP|EntrezGene=20425|HGNC=|MCL_coexpression_id=2694|UniProt=|association_with_transcript=-14bp_to_ENSMUST00000173260_5end|description=CAGE_peak_1_at_Shmt1_5end|id=chr11:60624607..60624712,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!3.27e-11!22;UBERON:0007499!3.27e-11!22;UBERON:0006925!3.27e-11!22;UBERON:0009497!3.27e-11!22;UBERON:0000015!3.27e-11!22;UBERON:0002423!3.27e-11!22;UBERON:0006235!3.27e-11!22;UBERON:0008835!3.27e-11!22;UBERON:0003894!3.27e-11!22;UBERON:0004161!3.27e-11!22;UBERON:0008836!3.27e-11!22;UBERON:0005172!3.78e-11!49;UBERON:0005173!3.78e-11!49;UBERON:0002417!3.78e-11!49;UBERON:0000916!3.78e-11!49;UBERON:0002365!4.73e-11!25;UBERON:0002330!4.73e-11!25;UBERON:0009854!1.33e-10!23;UBERON:0009856!1.33e-10!23;UBERON:0002530!1.02e-09!65;UBERON:0003929!1.82e-09!55;UBERON:0002368!2.20e-09!60;UBERON:0001007!2.68e-09!128;UBERON:0001555!2.68e-09!128;UBERON:0007026!2.68e-09!128;UBERON:0004921!7.71e-09!126;UBERON:0004185!7.71e-09!126;UBERON:0004119!8.01e-09!130;UBERON:0000925!8.01e-09!130;UBERON:0006595!8.01e-09!130;UBERON:0000949!1.84e-08!72;UBERON:0005057!1.15e-07!51;UBERON:0009569!6.01e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.22e-11,22;UBERON:0007499,3.22e-11,22;UBERON:0006925,3.22e-11,22;UBERON:0009497,3.22e-11,22;UBERON:0000015,3.22e-11,22;UBERON:0002423,3.22e-11,22;UBERON:0006235,3.22e-11,22;UBERON:0008835,3.22e-11,22;UBERON:0003894,3.22e-11,22;UBERON:0004161,3.22e-11,22;UBERON:0008836,3.22e-11,22;UBERON:0005172,3.73e-11,49;UBERON:0005173,3.73e-11,49;UBERON:0002417,3.73e-11,49;UBERON:0000916,3.73e-11,49;UBERON:0002365,4.67e-11,25;UBERON:0002330,4.67e-11,25;UBERON:0009854,1.31e-10,23;UBERON:0009856,1.31e-10,23;UBERON:0002530,7.09e-10,65;UBERON:0001007,1.03e-09,116;UBERON:0001555,1.03e-09,116;UBERON:0007026,1.03e-09,116;UBERON:0003929,1.32e-09,55;UBERON:0002368,1.52e-09,60;UBERON:0004921,3.02e-09,114;UBERON:0004119,3.37e-09,118;UBERON:0000925,3.37e-09,118;UBERON:0006595,3.37e-09,118;UBERON:0000949,1.34e-08,72;UBERON:0009569,5.96e-07,66|phase1_expression=4.16387002472464,4.88565570695105,4.09499315450582,1.20985684522732,3.00537437967808,24.6782529710478,21.4923629347884,4.51931632045517,37.0274339258884,34.641549895655,106.326358268039,107.612642484709,3.25281386869291,3.05971408466491,3.99731714178795,2.83465374345756,2.79824751251259,3.3123527362615,4.52477630898938,4.2438965179803,15.90309525825,24.8227378002213,24.0303806007821,21.7589694999033,21.564472420314,7.46501553349526,12.0613358924541,19.6078821744159,17.8622014288991,21.674591159354,25.0555477040494,43.8171164687146,44.8997294936736,31.6963362030877,67.0135757822957,68.1562045969819,65.9467020727452,0.418531630736908,2.3440060335714,3.66466620781659,0,0.683045484958446,0.971020706062307,2.89562681343828,4.8660926985367,2.75320128242522,1.56478268869608,8.50298109883741,1.5378032791413,0.972149495371417,4.75953833526233,2.87505128729943,4.02678254538567,2.17608642603403,6.04968838456435,1.80081605225163,3.43840127926508,1.03134418455488,2.02316460859598,1.05798195854407,5.70448263155561,1.69422266034566,1.77858959222228,1.3498495759221,3.9554654502679,1.4209602298922,3.59520132622086,0.768436610643109,9.85051316930538,8.77538599155989,7.99234853135252,0.856952953211411,3.75476519617743,10.4117179332711,11.6931474642248,8.27296907949019,4.40463523997555,1.65993539510744,0.921639199537461,1.58263545276233,1.18933936683133,0.52091337055676,0.279182999001381,1.68828783009504,2.29197371665215,2.35702868378934,1.99320353118744,1.4911955666024,2.80186915332781,3.77857800533928,4.05810284182349,105.832136868711,58.4775346988665,174.324130899015,100.065568286941,97.2218345001218,50.2791024071672,0.681721290312231,1.29893002301434,0.35333957451034,1.83096445709685,0,0,0,9.95858788651585,9.12095515710355,9.0994400102661,46.9295745645336,6.47344709117929,9.94562331734326,28.2781082628801,42.0162360070755,50.0435629045647,56.2195449261282,38.3339185262398,23.8766523526383,1.23597483867187,19.2317144703483,6.19227386364912,9.54424414689714,6.62524555381181,5.33362778448744,9.31958806090611,1.46390398505774,0.83778682725382,15.3274233125155,27.1980332628439,24.5960119707297,30.7509949516817,0.898743836428936,2.74500361691176,2.76439574648302,0.695297280769106,1.27857728665165,0.62336413367868,0.973447578406546,6.11036183101898,2.86136032403214,5.05445516867349,5.6819301089348,18.0867415718158,14.9436367881757,10.0834792690996,12.9606143338715,11.4301318574231,10.3772113430728,7.58983968933804,4.65666067330228,30.6106549964636,20.8016688184601,15.6596500505914,10.5213951565236,14.4584569597311,10.7958171621872,9.4659782747654,18.1121182804829,23.1730351813367,29.3376614110775,26.4272054437901,18.2270679831242,18.5275587385066,14.7650890398032,16.5721314909647,13.9702604540657,17.5864508691611,20.4629871380359,19.047411499373,15.7633212195679,13.4939076929054,10.342550236983,5.35054143002648,7.01759939641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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20425
|HGNC=
|MCL_coexpression_id=2694
|TSSclassifier=NA
|UniProt=
|association_with_transcript=-14bp_to_ENSMUST00000173260_5end
|cluster_id=chr11:60624607..60624712,-
|description=CAGE_peak_1_at_Shmt1_5end
|id=chr11:60624607..60624712,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!3.27e-11!22;UBERON:0007499!3.27e-11!22;UBERON:0006925!3.27e-11!22;UBERON:0009497!3.27e-11!22;UBERON:0000015!3.27e-11!22;UBERON:0002423!3.27e-11!22;UBERON:0006235!3.27e-11!22;UBERON:0008835!3.27e-11!22;UBERON:0003894!3.27e-11!22;UBERON:0004161!3.27e-11!22;UBERON:0008836!3.27e-11!22;UBERON:0005172!3.78e-11!49;UBERON:0005173!3.78e-11!49;UBERON:0002417!3.78e-11!49;UBERON:0000916!3.78e-11!49;UBERON:0002365!4.73e-11!25;UBERON:0002330!4.73e-11!25;UBERON:0009854!1.33e-10!23;UBERON:0009856!1.33e-10!23;UBERON:0002530!1.02e-09!65;UBERON:0003929!1.82e-09!55;UBERON:0002368!2.20e-09!60;UBERON:0001007!2.68e-09!128;UBERON:0001555!2.68e-09!128;UBERON:0007026!2.68e-09!128;UBERON:0004921!7.71e-09!126;UBERON:0004185!7.71e-09!126;UBERON:0004119!8.01e-09!130;UBERON:0000925!8.01e-09!130;UBERON:0006595!8.01e-09!130;UBERON:0000949!1.84e-08!72;UBERON:0005057!1.15e-07!51;UBERON:0009569!6.01e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.22e-11,22;UBERON:0007499,3.22e-11,22;UBERON:0006925,3.22e-11,22;UBERON:0009497,3.22e-11,22;UBERON:0000015,3.22e-11,22;UBERON:0002423,3.22e-11,22;UBERON:0006235,3.22e-11,22;UBERON:0008835,3.22e-11,22;UBERON:0003894,3.22e-11,22;UBERON:0004161,3.22e-11,22;UBERON:0008836,3.22e-11,22;UBERON:0005172,3.73e-11,49;UBERON:0005173,3.73e-11,49;UBERON:0002417,3.73e-11,49;UBERON:0000916,3.73e-11,49;UBERON:0002365,4.67e-11,25;UBERON:0002330,4.67e-11,25;UBERON:0009854,1.31e-10,23;UBERON:0009856,1.31e-10,23;UBERON:0002530,7.09e-10,65;UBERON:0001007,1.03e-09,116;UBERON:0001555,1.03e-09,116;UBERON:0007026,1.03e-09,116;UBERON:0003929,1.32e-09,55;UBERON:0002368,1.52e-09,60;UBERON:0004921,3.02e-09,114;UBERON:0004119,3.37e-09,118;UBERON:0000925,3.37e-09,118;UBERON:0006595,3.37e-09,118;UBERON:0000949,1.34e-08,72;UBERON:0009569,5.96e-07,66
|phase1_expression=4.16387002472464,4.88565570695105,4.09499315450582,1.20985684522732,3.00537437967808,24.6782529710478,21.4923629347884,4.51931632045517,37.0274339258884,34.641549895655,106.326358268039,107.612642484709,3.25281386869291,3.05971408466491,3.99731714178795,2.83465374345756,2.79824751251259,3.3123527362615,4.52477630898938,4.2438965179803,15.90309525825,24.8227378002213,24.0303806007821,21.7589694999033,21.564472420314,7.46501553349526,12.0613358924541,19.6078821744159,17.8622014288991,21.674591159354,25.0555477040494,43.8171164687146,44.8997294936736,31.6963362030877,67.0135757822957,68.1562045969819,65.9467020727452,0.418531630736908,2.3440060335714,3.66466620781659,0,0.683045484958446,0.971020706062307,2.89562681343828,4.8660926985367,2.75320128242522,1.56478268869608,8.50298109883741,1.5378032791413,0.972149495371417,4.75953833526233,2.87505128729943,4.02678254538567,2.17608642603403,6.04968838456435,1.80081605225163,3.43840127926508,1.03134418455488,2.02316460859598,1.05798195854407,5.70448263155561,1.69422266034566,1.77858959222228,1.3498495759221,3.9554654502679,1.4209602298922,3.59520132622086,0.768436610643109,9.85051316930538,8.77538599155989,7.99234853135252,0.856952953211411,3.75476519617743,10.4117179332711,11.6931474642248,8.27296907949019,4.40463523997555,1.65993539510744,0.921639199537461,1.58263545276233,1.18933936683133,0.52091337055676,0.279182999001381,1.68828783009504,2.29197371665215,2.35702868378934,1.99320353118744,1.4911955666024,2.80186915332781,3.77857800533928,4.05810284182349,105.832136868711,58.4775346988665,174.324130899015,100.065568286941,97.2218345001218,50.2791024071672,0.681721290312231,1.29893002301434,0.35333957451034,1.83096445709685,0,0,0,9.95858788651585,9.12095515710355,9.0994400102661,46.9295745645336,6.47344709117929,9.94562331734326,28.2781082628801,42.0162360070755,50.0435629045647,56.2195449261282,38.3339185262398,23.8766523526383,1.23597483867187,19.2317144703483,6.19227386364912,9.54424414689714,6.62524555381181,5.33362778448744,9.31958806090611,1.46390398505774,0.83778682725382,15.3274233125155,27.1980332628439,24.5960119707297,30.7509949516817,0.898743836428936,2.74500361691176,2.76439574648302,0.695297280769106,1.27857728665165,0.62336413367868,0.973447578406546,6.11036183101898,2.86136032403214,5.05445516867349,5.6819301089348,18.0867415718158,14.9436367881757,10.0834792690996,12.9606143338715,11.4301318574231,10.3772113430728,7.58983968933804,4.65666067330228,30.6106549964636,20.8016688184601,15.6596500505914,10.5213951565236,14.4584569597311,10.7958171621872,9.4659782747654,18.1121182804829,23.1730351813367,29.3376614110775,26.4272054437901,18.2270679831242,18.5275587385066,14.7650890398032,16.5721314909647,13.9702604540657,17.5864508691611,20.4629871380359,19.047411499373,15.7633212195679,13.4939076929054,10.342550236983,5.35054143002648,7.01759939641595,3.29325172936576,4.2946054003319,2.10289948564127,4.93942139420565,1.32167513193519,20.89159476642,23.8882840599462,23.6881405297647,30.5415883333361,37.3114520553184,29.7986578752126,28.7240695429964,17.0830462156024,27.6694243936338,22.368833583224,17.110256595539,13.2575579241002,14.3811105384675,26.8011181844621,20.7106924184542,16.1217715810119,25.5916668245793,14.6520056375005,19.9578301288408,21.7226785627741,17.393683332799,26.053453295194,27.1602672282468,55.2635522001639,58.6136528628552,155.044723966579,25.5273011745624,15.1350426237166,21.8116249013308,25.3575151735629,36.4177511226149,37.4300002118687,25.892652370573,44.1007816828096,91.9780734180073,56.0696005456683,82.2431494347393,115.453939052387,134.624541945811,122.88722826251,135.084185981743,2.03228509183265,23.1179522359991,22.6521317254416,17.9929790921699,13.8467246490216,10.0503754465089,6.42717830392237,5.46374214001837,3.4679731703362,2.43611158613652,4.14582398509466,5.07976275618788,2.93564469172023,3.32692834737477,0,1.08781136763742,14.7529281905711,24.8343071674259,0.963303539926752,1.17211686592203,14.2623402477708,9.84636616097055,11.042787679569,16.0079885161622,13.3562506594335,12.6653462914853,9.35754431146055,6.79383673893198,19.02610297872,8.76767573733936,11.4633455604492,0.642642632843614,7.2389443456217,13.5329858787114,10.5876523579824,6.43383479592888,2.65490276679926,28.4053344301328,39.9067095193471,13.9567759019365,9.7449624650655,8.9156192903739,10.8539883130653,16.7225515559653,16.0423820273125,17.0659849285341,3.16255825724996,4.12542172992747,0.340439605753788,13.8647042404109,12.1597162755789,11.7885369267376,7.44828981297549,7.13475270408282,5.26556865926787,5.48036908406279,8.91752490642099,2.54198485036584,11.9085334949679,10.0580614294303,22.7664841641227,20.4460815506448,21.1289048885552,12.1464265811345,15.1570035047522,0.927126510052548,3.75915937755276,8.66824845445534,13.3340059706192,8.66494902221579,2.1871076435364,7.77845788902177,19.0375841593118,19.3133004206648,17.1367967517486,15.2747298882418,21.6690155603078,20.128627245558,25.8132764564105,19.4452115293456,20.5260809921407,13.7561633312517,20.4980570198833,12.3025292732494,27.3487593645683,15.5334828271731,16.9107881605257,23.6236142749487,27.135192434964,15.9449974442119,23.1196084025139,24.1607259451813,15.4911555012395,25.5200594294142,29.9897725057533,16.9108884578204,12.3852902690882,6.00421129193539,25.948827557141,30.1970214064592,33.9093347972045,26.8540043501222,25.6298947667832,23.197721757354,20.97191285879,22.8184176882814,19.8137697303,16.6363205475787,9.74578807397524,12.1226920466815,6.778860326531,6.34845074122592,27.30427226501,27.3627262658901,25.3505770709758,6.95482538515886,3.37828455812128,9.52388446189778,11.7902608493486,20.5644562654499,0.564751842617067,0.460325236507177,0,0.343706364687375,1.37016503954128,0.755393897389701,1.35004500046361,0.45032120322422,0.906284817968409,0,20.7574695168353,11.9707462020309,14.3416228833473,12.398442570483,20.5420899375423,15.2590112013512,16.2240111295179,15.658664350156,17.329637317958,18.1941992469934,16.7296337927558,18.6740077972215,17.9791694342174,16.2623887108368,17.8624308451957,12.3836359733599,14.6014250690518,17.3618298417335,11.5384052224926,15.7502844543805,17.4863318716562,14.3755402989063,17.1674056762071,17.5869164125118,15.6221571489449,16.2460047152019,16.097661612804,20.2563677807139,16.9755142307327,12.906272248128,16.8461725736327,16.253239591968,15.5507796404482,16.1134314833405,15.046715656529,6.99469618226249,16.8430758080694,14.396360621236,16.4507965579205,14.117850823649,9.97031693167812
|short_description=p1@Shmt1
}}

Revision as of 05:42, 6 August 2015

Short description:p1@Shmt1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Shmt1_5end
Coexpression cluster:MCL_coexpression_mm9:2694
Association with transcript: -14bp_to_ENSMUST00000173260_5end
EntrezGene:20425
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Shmt1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I724.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I821.49
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E737.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F234.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6106.33
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1107.61
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.06
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.52
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.90
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H224.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I924.03
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D121.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D221.56
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I112.06
GP2+ M cell, pool3.CNhs13240.11847-124I219.61
Ileum epithelium, pool1.CNhs13199.10252-104B917.86
Ileum epithelium, pool2.CNhs13232.10253-104C121.67
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C825.06
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I343.82
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G644.90
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F567.01
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F668.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F765.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.50
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.05
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.85
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.69
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D92.80
Mouse Schwann, donor2.CNhs12573.11746-123F93.78
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7105.83
Mouse hepatocyte, donor1.CNhs13078.11714-123C458.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C8174.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F4100.07
Mouse hepatocyte, donor8.CNhs13091.11824-124F697.22
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A750.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.96
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.12
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.10
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B646.93
accessory axillary lymph node, adult.CNhs10475.1063-29H96.47
adrenal gland, adult.CNhs10508.49-24D79.95
adrenal gland, embryo E14.CNhs11038.406-44C528.28
adrenal gland, embryo E16.CNhs11004.1254-43D642.02
adrenal gland, embryo E17.CNhs11043.1263-45I150.04
adrenal gland, embryo E18.CNhs11026.1262-18F556.22
adrenal gland, neonate N00.CNhs11191.1311-23C138.33
adrenal gland, neonate N25.CNhs11223.1377-27I323.88
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H119.23
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F59.54
bone (os femoris), neonate N16.CNhs11225.1525-43A66.63
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H715.33
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C727.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D124.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D430.75
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.11
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B25.05
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C618.09
eyeball, embryo E14.CNhs10521.399-16E214.94
eyeball, embryo E15.CNhs10593.426-16C910.08
eyeball, embryo E17.CNhs11023.1261-18D412.96
eyeball, neonate N00.CNhs11207.633-15C611.43
eyeball, neonate N01.CNhs11140.1532-43E710.38
eyeball, neonate N02.CNhs11205.1551-44G87.59
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E230.61
forelimb, embryo E12.CNhs10600.359-14H220.80
forelimb, embryo E13.CNhs10589.384-1E215.66
forelimb, embryo E14.CNhs10577.413-26A810.52
forelimb, embryo E15.CNhs11007.437-20E714.46
forelimb, embryo E17.CNhs10598.1517-43C410.80
forelimb, embryo E18.CNhs11008.1520-43B59.47
gonad, embryo E13.CNhs11044.1564-45I618.11
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C823.17
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D229.34
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D526.43
heart, embryo E11.CNhs10586.331-24E918.23
heart, embryo E12.CNhs11015.353-12F518.53
heart, embryo E13.CNhs11013.376-3I914.77
heart, embryo E14.CNhs10597.403-26D416.57
heart, embryo E15.CNhs11017.431-16C813.97
heart, embryo E16.CNhs11021.457-17C617.59
heart, embryo E17.CNhs11025.479-18E520.46
heart, embryo E18.CNhs11030.1283-20G319.05
heart, neonate N00.CNhs11213.639-21E315.76
heart, neonate N03.CNhs11221.1349-25I213.49
heart, neonate N10.CNhs11118.749-24G110.34
heart, neonate N16.CNhs11209.782-15G15.35
heart, neonate N20.CNhs11127.821-26I67.02
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D24.29
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G14.94
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A320.89
intestine, embryo E12.CNhs11019.1251-16I523.89
intestine, embryo E13.CNhs11010.381-16D523.69
intestine, embryo E15.CNhs10602.976-16D830.54
intestine, embryo E16.CNhs10585.463-22H437.31
intestine, embryo E17.CNhs10582.482-18D329.80
intestine, embryo E18.CNhs10526.1289-20F728.72
intestine, neonate N00.CNhs11126.644-26D117.08
intestine, neonate N01.CNhs11192.1322-23E927.67
intestine, neonate N06.CNhs11102.688-20B822.37
intestine, neonate N07.CNhs11095.720-20F217.11
intestine, neonate N10.CNhs11098.755-23A513.26
intestine, neonate N20.CNhs11187.827-18D114.38
intestine, neonate N25.CNhs11121.1352-25E326.80
intestine, neonate N30.CNhs11131.1384-42G120.71
kidney, embryo E14.CNhs10606.411-4I916.12
kidney, embryo E15.CNhs10997.434-16F825.59
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I219.96
kidney, embryo E18.CNhs11001.1288-20C721.72
kidney, neonate N00.CNhs11214.646-21G717.39
kidney, neonate N10.CNhs11206.758-6D526.05
kidney, neonate N20.CNhs11113.832-19I127.16
kidney, neonate N25.CNhs11122.1353-25F355.26
kidney, neonate N30.CNhs11203.1385-42H158.61
liver, adult pregnant day01.CNhs10466.508-5B2155.04
liver, embryo E12.CNhs10601.355-15F825.53
liver, embryo E13.CNhs10524.378-3H615.14
liver, embryo E14.CNhs10594.409-16E121.81
liver, embryo E15.CNhs10520.433-16D725.36
liver, embryo E16.CNhs10523.462-17F536.42
liver, embryo E17.CNhs10510.481-18A337.43
liver, embryo E18.CNhs10579.499-43G425.89
liver, neonate N00.CNhs11117.641-24F444.10
liver, neonate N03.CNhs11123.1345-25G291.98
liver, neonate N06.CNhs11101.684-20A856.07
liver, neonate N07.CNhs11103.716-20H282.24
liver, neonate N10.CNhs11115.751-24B9115.45
liver, neonate N20.CNhs11220.823-25A3134.62
liver, neonate N25.CNhs11198.1368-26H1122.89
liver, neonate N30.CNhs11106.1382-42D1135.08
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G223.12
lung, embryo E14.CNhs10604.404-26F822.65
lung, embryo E15.CNhs11020.432-17C517.99
lung, embryo E16.CNhs10998.458-17B613.85
lung, embryo E17.CNhs10605.480-44A610.05
lung, embryo E18.CNhs10583.1287-20I66.43
lung, neonate N00.CNhs11224.640-42C65.46
lung, neonate N06.CNhs11212.683-20E53.47
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E64.15
lung, neonate N20.CNhs11109.822-18A45.08
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H23.33
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B614.75
mammary gland, adult pregnant day19.CNhs10476.588-5H224.83
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C714.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.85
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.01
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E313.36
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.79
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.03
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.77
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.46
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I77.24
ovary, embryo E18.CNhs11040.505-44H713.53
ovary, neonate N00.CNhs11217.1299-22I410.59
oviduct, adult pregnant day01.CNhs10500.988-6G66.43
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F428.41
pancreas, embryo E15.CNhs11042.1556-45F239.91
pancreas, embryo E16.CNhs11003.460-26E513.96
pancreas, embryo E17.CNhs10599.1558-45G39.74
pancreas, embryo E18.CNhs10580.1535-43I78.92
pancreas, neonate N00.CNhs11105.645-26G910.85
pancreas, neonate N01.CNhs11138.1531-43D716.72
pancreas, neonate N02.CNhs11139.1539-43D816.04
pancreas, neonate N16.CNhs11136.787-43B617.07
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E613.86
pituitary gland, embryo E13.CNhs11009.370-44C712.16
pituitary gland, embryo E14.CNhs11037.398-44A511.79
pituitary gland, embryo E15.CNhs10592.427-16B97.45
pituitary gland, embryo E16.CNhs11036.449-43F67.13
pituitary gland, embryo E17.CNhs11039.1265-44F55.27
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I78.92
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F811.91
skin, adult.CNhs10492.30-1C310.06
skin, neonate N00.CNhs11124.650-25G422.77
skin, neonate N03.CNhs11215.662-22H320.45
skin, neonate N06.CNhs11097.693-20I521.13
skin, neonate N10.CNhs11108.762-6C412.15
small intestine, neonate N16.CNhs11114.790-21I115.16
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G23.76
spleen, embryo E16.CNhs11035.461-43C18.67
spleen, embryo E18.CNhs11011.1271-21F213.33
spleen, neonate N10.CNhs11116.752-24D18.66
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G37.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C619.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C919.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.14
stomach, adult.CNhs10503.33-1H615.27
stomach, embryo E12.CNhs10588.356-43E321.67
stomach, embryo E15.CNhs10603.1252-16G820.13
stomach, embryo E16.CNhs11022.459-17D425.81
stomach, embryo E17.CNhs11006.1035-18D519.45
stomach, embryo E18.CNhs10999.1286-20C620.53
stomach, neonate N03.CNhs11193.1340-24B813.76
stomach, neonate N07.CNhs11210.718-18A920.50
stomach, neonate N25.CNhs11104.1355-25E412.30
stomach, neonate N30.CNhs11134.1386-42I127.35
submandibular gland, adult.CNhs10469.59-29C115.53
testis, adult.CNhs10504.57-7G516.91
testis, embryo E13.CNhs11031.389-23F523.62
testis, embryo E15.CNhs11034.443-27C527.14
testis, embryo E16.CNhs11033.470-26G515.94
testis, embryo E17.CNhs11029.486-18I523.12
testis, embryo E18.CNhs11027.503-18G524.16
testis, neonate N00.CNhs11189.1300-22B715.49
testis, neonate N07.CNhs11222.726-26I425.52
testis, neonate N10.CNhs11204.763-44D929.99
testis, neonate N20.CNhs11110.839-18H316.91
testis, neonate N30.CNhs11130.1391-42E212.39
thymus, adult.CNhs10471.38-12B56.00
thymus, embryo E14.CNhs11041.402-44I425.95
thymus, embryo E15.CNhs11005.430-45I230.20
thymus, embryo E16.CNhs11002.456-26C533.91
thymus, embryo E17.CNhs10581.478-18C126.85
thymus, embryo E18.CNhs10595.1273-19G425.63
thymus, neonate N02.CNhs11181.1541-43F823.20
thymus, neonate N03.CNhs11137.2104-43C720.97
thymus, neonate N06.CNhs11197.681-26C422.82
thymus, neonate N07.CNhs11211.713-19D319.81
thymus, neonate N10.CNhs11194.748-24E416.64
thymus, neonate N20.CNhs11186.820-7A29.75
thymus, neonate N25.CNhs11125.1362-25G712.12
thymus, neonate N30.CNhs11132.1393-42G26.78
tongue, adult.CNhs10499.32-1B46.35
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H327.30
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F727.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G525.35
urinary bladder, adult.CNhs10481.879-12E46.95
uterus, adult pregnant day19.CNhs10497.590-15F53.38
uterus, adult.CNhs10509.92-27E59.52
vagina, adult.CNhs10502.89-27D511.79
vesicular gland, adult.CNhs10491.51-27F820.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I820.76
whole body, embryo E12.CNhs10587.857-27C911.97
whole body, embryo E13.CNhs10512.372-23H214.34
whole body, embryo E14.5.CNhs10578.420-27D212.40
whole body, embryo E14.CNhs10519.395-14B120.54
whole body, embryo E16.CNhs10514.453-14F215.26
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.33
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.19
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.73
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G518.67
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.98
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.60
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G517.36
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.75
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.38
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.17
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.59
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G515.62
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G520.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.91
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G516.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.11
whole body, embryo E17.5.CNhs10513.490-9F915.05
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B316.84
whole body, neonate N00.CNhs10525.657-19C214.40
whole body, neonate N01.CNhs10576.659-23C616.45
whole body, neonate N06.CNhs10515.692-21D114.12
whole body, neonate N10.CNhs10518.761-6B49.97





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
liver3.22e-1122
epithelial sac3.22e-1122
digestive gland3.22e-1122
epithelium of foregut-midgut junction3.22e-1122
anatomical boundary3.22e-1122
hepatobiliary system3.22e-1122
foregut-midgut junction3.22e-1122
hepatic diverticulum3.22e-1122
liver primordium3.22e-1122
septum transversum3.22e-1122
liver bud3.22e-1122
abdomen element3.73e-1149
abdominal segment element3.73e-1149
abdominal segment of trunk3.73e-1149
abdomen3.73e-1149
exocrine gland4.67e-1125
exocrine system4.67e-1125
digestive tract diverticulum1.31e-1023
sac1.31e-1023
gland7.09e-1065
digestive system1.03e-09116
digestive tract1.03e-09116
primitive gut1.03e-09116
gut epithelium1.32e-0955
endocrine gland1.52e-0960
subdivision of digestive tract3.02e-09114
endoderm-derived structure3.37e-09118
endoderm3.37e-09118
presumptive endoderm3.37e-09118
endocrine system1.34e-0872
subdivision of trunk5.96e-0766
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