FFCP PHASE1:Mm9::chr16:34120167..34120179,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=24|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:34120167..34120179,+|id=chr16:34120167..34120179,+|ontology_enrichment_celltype=CL:0002563!8.68e-27!9;CL:0002251!8.68e-27!9;CL:0000239!2.92e-19!6;CL:0000677!2.92e-19!6;CL:0000212!2.92e-19!6;CL:0000584!2.92e-19!6;CL:0000075!2.04e-16!7;CL:0000066!6.43e-16!25;CL:0002076!1.92e-15!15;CL:0000223!3.47e-11!20;CL:0000473!1.70e-10!3;CL:0000627!1.70e-10!3;CL:0000682!1.70e-10!3;CL:0002250!4.04e-09!3|ontology_enrichment_celltype_v019_2=CL:0002563,4.42e-27,9;CL:0002251,4.42e-27,9;CL:0000239,3.90e-24,6;CL:0000677,3.90e-24,6;CL:0000584,3.90e-24,6;CL:0000075,1.28e-20,7;CL:0000066,1.70e-17,25;CL:0002076,7.98e-16,15;CL:0000682,5.98e-13,3;CL:0000223,1.36e-11,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.64e-43!15;UBERON:0001242!3.17e-37!13;UBERON:0000060!3.17e-37!13;UBERON:0001262!3.17e-37!13;UBERON:0004786!3.17e-37!13;UBERON:0000160!3.10e-27!43;UBERON:0003350!8.68e-27!9;UBERON:0004808!8.68e-27!9;UBERON:0001277!8.68e-27!9;UBERON:0004923!1.11e-25!24;UBERON:0000485!1.24e-21!11;UBERON:0005409!1.31e-20!59;UBERON:0000331!4.61e-09!3;UBERON:0002116!4.61e-09!3;UBERON:0001204!4.61e-09!3;UBERON:0001168!4.61e-09!3;UBERON:0001007!5.36e-09!128;UBERON:0001555!5.36e-09!128;UBERON:0007026!5.36e-09!128;UBERON:0004119!8.78e-09!130;UBERON:0000925!8.78e-09!130;UBERON:0006595!8.78e-09!130;UBERON:0004921!3.12e-07!126;UBERON:0004185!3.12e-07!126;UBERON:0001962!3.62e-07!2;UBERON:0001961!3.62e-07!2;UBERON:0001744!3.62e-07!2;UBERON:0001155!5.50e-07!2;UBERON:0000059!5.50e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.78e-35,15;UBERON:0000160,1.65e-33,31;UBERON:0001242,1.47e-28,13;UBERON:0001262,1.47e-28,13;UBERON:0004786,1.47e-28,13;UBERON:0003350,4.42e-27,9;UBERON:0004808,4.42e-27,9;UBERON:0001277,4.42e-27,9;UBERON:0000485,5.73e-22,11;UBERON:0004923,2.08e-21,24;UBERON:0005409,4.24e-21,47;UBERON:0001007,6.59e-09,116;UBERON:0001555,6.59e-09,116;UBERON:0007026,6.59e-09,116;UBERON:0001962,1.03e-08,2;UBERON:0001961,1.03e-08,2;UBERON:0001744,1.03e-08,2;UBERON:0004119,1.07e-08,118;UBERON:0000925,1.07e-08,118;UBERON:0006595,1.07e-08,118;UBERON:0001155,1.75e-08,2;UBERON:0000059,1.75e-08,2;UBERON:0004921,6.82e-07,114|phase1_expression=0,9.77131141390211,11.3749809847384,9.37639055051173,16.5295590882295,2.85394762250213,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15980299262857,3.21172993494038,6.89078356938024,5.1691439539089,5.38678081714723,0.570070258369122,2.01624103807945,0.443461021310609,0,0,0,1.44425809875637,0.664938581433969,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,4.23120906661671,0,0,0,0,0,0,4.2707615539006,0,0,0,0,7.19055526923377,3.24207074812041,2.58883655230677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:34120167..34120179,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:34120167..34120179,+ | |||
|description=CAGE_peak_at_chr16:34120167..34120179,+ | |||
|id=chr16:34120167..34120179,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.68e-27!9;CL:0002251!8.68e-27!9;CL:0000239!2.92e-19!6;CL:0000677!2.92e-19!6;CL:0000212!2.92e-19!6;CL:0000584!2.92e-19!6;CL:0000075!2.04e-16!7;CL:0000066!6.43e-16!25;CL:0002076!1.92e-15!15;CL:0000223!3.47e-11!20;CL:0000473!1.70e-10!3;CL:0000627!1.70e-10!3;CL:0000682!1.70e-10!3;CL:0002250!4.04e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.42e-27,9;CL:0002251,4.42e-27,9;CL:0000239,3.90e-24,6;CL:0000677,3.90e-24,6;CL:0000584,3.90e-24,6;CL:0000075,1.28e-20,7;CL:0000066,1.70e-17,25;CL:0002076,7.98e-16,15;CL:0000682,5.98e-13,3;CL:0000223,1.36e-11,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.64e-43!15;UBERON:0001242!3.17e-37!13;UBERON:0000060!3.17e-37!13;UBERON:0001262!3.17e-37!13;UBERON:0004786!3.17e-37!13;UBERON:0000160!3.10e-27!43;UBERON:0003350!8.68e-27!9;UBERON:0004808!8.68e-27!9;UBERON:0001277!8.68e-27!9;UBERON:0004923!1.11e-25!24;UBERON:0000485!1.24e-21!11;UBERON:0005409!1.31e-20!59;UBERON:0000331!4.61e-09!3;UBERON:0002116!4.61e-09!3;UBERON:0001204!4.61e-09!3;UBERON:0001168!4.61e-09!3;UBERON:0001007!5.36e-09!128;UBERON:0001555!5.36e-09!128;UBERON:0007026!5.36e-09!128;UBERON:0004119!8.78e-09!130;UBERON:0000925!8.78e-09!130;UBERON:0006595!8.78e-09!130;UBERON:0004921!3.12e-07!126;UBERON:0004185!3.12e-07!126;UBERON:0001962!3.62e-07!2;UBERON:0001961!3.62e-07!2;UBERON:0001744!3.62e-07!2;UBERON:0001155!5.50e-07!2;UBERON:0000059!5.50e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.78e-35,15;UBERON:0000160,1.65e-33,31;UBERON:0001242,1.47e-28,13;UBERON:0001262,1.47e-28,13;UBERON:0004786,1.47e-28,13;UBERON:0003350,4.42e-27,9;UBERON:0004808,4.42e-27,9;UBERON:0001277,4.42e-27,9;UBERON:0000485,5.73e-22,11;UBERON:0004923,2.08e-21,24;UBERON:0005409,4.24e-21,47;UBERON:0001007,6.59e-09,116;UBERON:0001555,6.59e-09,116;UBERON:0007026,6.59e-09,116;UBERON:0001962,1.03e-08,2;UBERON:0001961,1.03e-08,2;UBERON:0001744,1.03e-08,2;UBERON:0004119,1.07e-08,118;UBERON:0000925,1.07e-08,118;UBERON:0006595,1.07e-08,118;UBERON:0001155,1.75e-08,2;UBERON:0000059,1.75e-08,2;UBERON:0004921,6.82e-07,114 | |||
|phase1_expression=0,9.77131141390211,11.3749809847384,9.37639055051173,16.5295590882295,2.85394762250213,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15980299262857,3.21172993494038,6.89078356938024,5.1691439539089,5.38678081714723,0.570070258369122,2.01624103807945,0.443461021310609,0,0,0,1.44425809875637,0.664938581433969,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,4.23120906661671,0,0,0,0,0,0,4.2707615539006,0,0,0,0,7.19055526923377,3.24207074812041,2.58883655230677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:34120167..34120179,+ | |||
}} |
Latest revision as of 08:35, 6 August 2015
Short description: | p@chr16:34120167..34120179, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:34120167..34120179, + |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.42e-27 | 9 |
epithelial cell of alimentary canal | 4.42e-27 | 9 |
brush border epithelial cell | 3.90e-24 | 6 |
gut absorptive cell | 3.90e-24 | 6 |
enterocyte | 3.90e-24 | 6 |
columnar/cuboidal epithelial cell | 1.28e-20 | 7 |
epithelial cell | 1.70e-17 | 25 |
endo-epithelial cell | 7.98e-16 | 15 |
M cell of gut | 5.98e-13 | 3 |
endodermal cell | 1.36e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.78e-35 | 15 |
intestine | 1.65e-33 | 31 |
intestinal mucosa | 1.47e-28 | 13 |
wall of intestine | 1.47e-28 | 13 |
gastrointestinal system mucosa | 1.47e-28 | 13 |
epithelium of mucosa | 4.42e-27 | 9 |
gastrointestinal system epithelium | 4.42e-27 | 9 |
intestinal epithelium | 4.42e-27 | 9 |
simple columnar epithelium | 5.73e-22 | 11 |
organ component layer | 2.08e-21 | 24 |
gastrointestinal system | 4.24e-21 | 47 |
digestive system | 6.59e-09 | 116 |
digestive tract | 6.59e-09 | 116 |
primitive gut | 6.59e-09 | 116 |
gut-associated lymphoid tissue | 1.03e-08 | 2 |
mucosa-associated lymphoid tissue | 1.03e-08 | 2 |
lymphoid tissue | 1.03e-08 | 2 |
endoderm-derived structure | 1.07e-08 | 118 |
endoderm | 1.07e-08 | 118 |
presumptive endoderm | 1.07e-08 | 118 |
colon | 1.75e-08 | 2 |
large intestine | 1.75e-08 | 2 |
subdivision of digestive tract | 6.82e-07 | 114 |