FFCP PHASE1:Mm9::chr8:35685507..35685512,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:35685507..35685512,+|id=chr8:35685507..35685512,+|ontology_enrichment_celltype=CL:0002563!3.86e-13!9;CL:0002251!3.86e-13!9;CL:0002250!2.91e-11!3;CL:0000066!1.68e-09!25;CL:0002076!1.32e-07!15;CL:0000223!1.84e-07!20|ontology_enrichment_celltype_v019_2=CL:0002250,3.67e-34,3;CL:0002563,3.75e-20,9;CL:0002251,3.75e-20,9;CL:0000066,5.20e-16,25;CL:0000223,4.24e-14,20;CL:0002076,2.74e-12,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!9.58e-21!15;UBERON:0000160!6.96e-16!43;UBERON:0001242!1.89e-15!13;UBERON:0000060!1.89e-15!13;UBERON:0001262!1.89e-15!13;UBERON:0004786!1.89e-15!13;UBERON:0004923!9.09e-15!24;UBERON:0005409!9.83e-14!59;UBERON:0003350!3.86e-13!9;UBERON:0004808!3.86e-13!9;UBERON:0001277!3.86e-13!9;UBERON:0000485!1.26e-10!11;UBERON:0001007!1.34e-08!128;UBERON:0001555!1.34e-08!128;UBERON:0007026!1.34e-08!128;UBERON:0004119!2.14e-08!130;UBERON:0000925!2.14e-08!130;UBERON:0006595!2.14e-08!130;UBERON:0001962!1.08e-07!2;UBERON:0001961!1.08e-07!2;UBERON:0001744!1.08e-07!2;UBERON:0004921!8.32e-07!126;UBERON:0004185!8.32e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.80e-26,15;UBERON:0001962,3.81e-22,2;UBERON:0001961,3.81e-22,2;UBERON:0001744,3.81e-22,2;UBERON:0003350,3.75e-20,9;UBERON:0004808,3.75e-20,9;UBERON:0001277,3.75e-20,9;UBERON:0000485,1.39e-16,11;UBERON:0004923,1.66e-16,24;UBERON:0002465,3.97e-15,3;UBERON:0001242,4.15e-14,13;UBERON:0001262,4.15e-14,13;UBERON:0004786,4.15e-14,13;UBERON:0003199,5.53e-12,1|phase1_expression=0,0,0,0.30246421130683,0,1.17515490338323,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,1.14704640533585,0.57423196411502,0,1.50829862880122,0,0,0.886922042621219,0,0,0,8.95440021228951,4.48833542467929,8.98345167554424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03991400112325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0.22237804384487,0,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr8:35685507..35685512,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:35685507..35685512,+ | |||
|description=CAGE_peak_at_chr8:35685507..35685512,+ | |||
|id=chr8:35685507..35685512,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.86e-13!9;CL:0002251!3.86e-13!9;CL:0002250!2.91e-11!3;CL:0000066!1.68e-09!25;CL:0002076!1.32e-07!15;CL:0000223!1.84e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,3.67e-34,3;CL:0002563,3.75e-20,9;CL:0002251,3.75e-20,9;CL:0000066,5.20e-16,25;CL:0000223,4.24e-14,20;CL:0002076,2.74e-12,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.58e-21!15;UBERON:0000160!6.96e-16!43;UBERON:0001242!1.89e-15!13;UBERON:0000060!1.89e-15!13;UBERON:0001262!1.89e-15!13;UBERON:0004786!1.89e-15!13;UBERON:0004923!9.09e-15!24;UBERON:0005409!9.83e-14!59;UBERON:0003350!3.86e-13!9;UBERON:0004808!3.86e-13!9;UBERON:0001277!3.86e-13!9;UBERON:0000485!1.26e-10!11;UBERON:0001007!1.34e-08!128;UBERON:0001555!1.34e-08!128;UBERON:0007026!1.34e-08!128;UBERON:0004119!2.14e-08!130;UBERON:0000925!2.14e-08!130;UBERON:0006595!2.14e-08!130;UBERON:0001962!1.08e-07!2;UBERON:0001961!1.08e-07!2;UBERON:0001744!1.08e-07!2;UBERON:0004921!8.32e-07!126;UBERON:0004185!8.32e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.80e-26,15;UBERON:0001962,3.81e-22,2;UBERON:0001961,3.81e-22,2;UBERON:0001744,3.81e-22,2;UBERON:0003350,3.75e-20,9;UBERON:0004808,3.75e-20,9;UBERON:0001277,3.75e-20,9;UBERON:0000485,1.39e-16,11;UBERON:0004923,1.66e-16,24;UBERON:0002465,3.97e-15,3;UBERON:0001242,4.15e-14,13;UBERON:0001262,4.15e-14,13;UBERON:0004786,4.15e-14,13;UBERON:0003199,5.53e-12,1 | |||
|phase1_expression=0,0,0,0.30246421130683,0,1.17515490338323,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,1.14704640533585,0.57423196411502,0,1.50829862880122,0,0,0.886922042621219,0,0,0,8.95440021228951,4.48833542467929,8.98345167554424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03991400112325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0.22237804384487,0,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:35685507..35685512,+ | |||
}} |
Latest revision as of 09:00, 6 August 2015
Short description: | p@chr8:35685507..35685512, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:35685507..35685512, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 3.67e-34 | 3 |
intestinal epithelial cell | 3.75e-20 | 9 |
epithelial cell of alimentary canal | 3.75e-20 | 9 |
epithelial cell | 5.20e-16 | 25 |
endodermal cell | 4.24e-14 | 20 |
endo-epithelial cell | 2.74e-12 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.80e-26 | 15 |
gut-associated lymphoid tissue | 3.81e-22 | 2 |
mucosa-associated lymphoid tissue | 3.81e-22 | 2 |
lymphoid tissue | 3.81e-22 | 2 |
epithelium of mucosa | 3.75e-20 | 9 |
gastrointestinal system epithelium | 3.75e-20 | 9 |
intestinal epithelium | 3.75e-20 | 9 |
simple columnar epithelium | 1.39e-16 | 11 |
organ component layer | 1.66e-16 | 24 |
lymphoid system | 3.97e-15 | 3 |
intestinal mucosa | 4.15e-14 | 13 |
wall of intestine | 4.15e-14 | 13 |
gastrointestinal system mucosa | 4.15e-14 | 13 |
egg chamber | 5.53e-12 | 1 |