FFCP PHASE1:Hg19::chr10:102495147..102495159,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=8616 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=G3V3X9 | ||
|association_with_transcript=-200bp_to_ENST00000553492_5end | |association_with_transcript=-200bp_to_ENST00000553492_5end | ||
|cluster_id=chr10:102495147..102495159,+ | |cluster_id=chr10:102495147..102495159,+ | ||
Latest revision as of 22:06, 15 September 2015
| Short description: | p4@PAX2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_PAX2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -200bp_to_ENST00000553492_5end |
| EntrezGene: | PAX2 |
| HGNC: | 8616 |
| UniProt: | G3V3X9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@PAX2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| kidney cell | 1.22e-81 | 17 |
| kidney epithelial cell | 1.22e-81 | 17 |
| kidney tubule cell | 5.32e-74 | 10 |
| nephron tubule epithelial cell | 5.32e-74 | 10 |
| epithelial cell of nephron | 6.44e-62 | 15 |
| brush border epithelial cell | 2.25e-35 | 3 |
| kidney cortex tubule cell | 2.25e-35 | 3 |
| epithelial cell of proximal tubule | 2.25e-35 | 3 |
| kidney cortical cell | 1.19e-34 | 12 |
| renal cortical epithelial cell | 1.19e-34 | 12 |
Showing 1 to 10 of 35 entries
| Ontology term | p-value | n |
|---|---|---|
| kidney | 1.73e-86 | 26 |
| kidney mesenchyme | 1.73e-86 | 26 |
| upper urinary tract | 1.73e-86 | 26 |
| kidney rudiment | 1.73e-86 | 26 |
| kidney field | 1.73e-86 | 26 |
| nephron tubule epithelium | 5.32e-74 | 10 |
| cavitated compound organ | 2.65e-72 | 31 |
| excretory tube | 1.04e-71 | 16 |
| kidney epithelium | 1.04e-71 | 16 |
| nephron epithelium | 6.44e-62 | 15 |
Showing 1 to 10 of 64 entries
