FFCP PHASE1:Hg19::chr12:106994905..106994954,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9985 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B4DZB7,Q33E94 | ||
|association_with_transcript=0bp_to_ENST00000357881,ENST00000536688,ENST00000536722,NM_001206691,uc001tls.2,uc001tlt.2,uc010swv.1_5end | |association_with_transcript=0bp_to_ENST00000357881,ENST00000536688,ENST00000536722,NM_001206691,uc001tls.2,uc001tlt.2,uc010swv.1_5end | ||
|cluster_id=chr12:106994905..106994954,+ | |cluster_id=chr12:106994905..106994954,+ |
Latest revision as of 03:02, 16 September 2015
Short description: | p6@RFX4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RFX4_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000357881, ENST00000536688, ENST00000536722, NM_001206691, uc001tls.2, uc001tlt.2, uc010swv.1_5end |
EntrezGene: | RFX4 |
HGNC: | 9985 |
UniProt: | B4DZB7Q33E94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@RFX4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell of uterus | 1.57e-09 | 6 |
stromal cell of endometrium | 1.57e-09 | 6 |
Showing 1 to 2 of 2 entries
Ontology term | p-value | n |
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testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
reproductive organ | 3.42e-10 | 48 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
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female reproductive endometrioid cancer | 1.57e-09 | 6 |
Showing 1 to 1 of 1 entries