FFCP PHASE2:Hg19::chr7:128001954..128001966,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:401399 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:37280 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=401399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=37280 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9JH25,C9JWH6 | ||
|association_with_transcript=-215bp_to_ENST00000435512,ENST00000446477,ENST00000495931,ENST00000535159,NM_001114726,NM_001174164,uc010llh.2_5end | |association_with_transcript=-215bp_to_ENST00000435512,ENST00000446477,ENST00000495931,ENST00000535159,NM_001114726,NM_001174164,uc010llh.2_5end | ||
|cluster_id=chr7:128001954..128001966,- | |cluster_id=chr7:128001954..128001966,- | ||
Latest revision as of 03:20, 16 September 2015
| Short description: | p5@PRRT4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_PRRT4_5end |
| Coexpression cluster: | C4650_neuroblastoma_neuroectodermal_mature_rhabdomyosarcoma_neuroepithelioma_small_acute |
| Association with transcript: | -215bp_to_ENST00000435512, ENST00000446477, ENST00000495931, ENST00000535159, NM_001114726, NM_001174164, uc010llh.2_5end |
| EntrezGene: | PRRT4 |
| HGNC: | 37280 |
| UniProt: | C9JH25C9JWH6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@PRRT4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| pulmonary valve | 6.82e-13 | 1 |
| semi-lunar valve | 6.82e-13 | 1 |
| sympathetic nervous system | 1.77e-10 | 5 |
| autonomic nervous system | 1.77e-10 | 5 |
| neural tissue | 3.93e-07 | 2 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| neuroectodermal tumor | 2.07e-29 | 10 |
| germ cell and embryonal cancer | 2.23e-13 | 22 |
| germ cell cancer | 2.23e-13 | 22 |
| neuroendocrine tumor | 7.05e-09 | 6 |
| peripheral nerve sheath neoplasm | 3.93e-07 | 2 |
| neurofibroma | 3.93e-07 | 2 |
Showing 1 to 6 of 6 entries
