FFCP PHASE2:Hg19::chr20:43030002..43030028,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3172 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:5024 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3172 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=5024 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P41235,E7ERE7,F1D8T1,F1D8S2 | ||
|association_with_transcript=78bp_to_ENST00000316099,ENST00000338692,ENST00000415691,ENST00000443598,NM_000457,NM_178849,NM_178850,uc002xly.2,uc002xlz.2,uc002xma.2,uc010ggq.2_5end | |association_with_transcript=78bp_to_ENST00000316099,ENST00000338692,ENST00000415691,ENST00000443598,NM_000457,NM_178849,NM_178850,uc002xly.2,uc002xlz.2,uc002xma.2,uc010ggq.2_5end | ||
|cluster_id=chr20:43030002..43030028,+ | |cluster_id=chr20:43030002..43030028,+ |
Latest revision as of 08:01, 16 September 2015
Short description: | p3@HNF4A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HNF4A_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 78bp_to_ENST00000316099, ENST00000338692, ENST00000415691, ENST00000443598, NM_000457, NM_178849, NM_178850, uc002xly.2, uc002xlz.2, uc002xma.2, uc010ggq.2_5end |
EntrezGene: | HNF4A |
HGNC: | 5024 |
UniProt: | P41235E7ERE7F1D8T1F1D8S2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@HNF4A |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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hepatocyte | 1.51e-26 | 12 |
endodermal cell | 1.27e-09 | 58 |
intestinal epithelial cell | 2.58e-07 | 4 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
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intestine | 8.46e-34 | 17 |
digestive tract diverticulum | 3.87e-27 | 23 |
liver | 4.34e-27 | 19 |
digestive gland | 4.34e-27 | 19 |
liver bud | 4.34e-27 | 19 |
sac | 8.28e-24 | 26 |
hepatic diverticulum | 3.37e-23 | 22 |
liver primordium | 3.37e-23 | 22 |
gastrointestinal system | 6.89e-23 | 25 |
large intestine | 1.49e-20 | 11 |
Showing 1 to 10 of 52 entries