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FFCP PHASE2:Hg19::chr20:43030002..43030028,+: Difference between revisions

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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3172 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:5024 |TSSclass...")
 
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|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:3172
|EntrezGene=3172
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=HGNC:5024
|HGNC=5024
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=uniprot:P41235,uniprot:E7ERE7,uniprot:F1D8T1,uniprot:F1D8S2
|UniProt=P41235,E7ERE7,F1D8T1,F1D8S2
|association_with_transcript=78bp_to_ENST00000316099,ENST00000338692,ENST00000415691,ENST00000443598,NM_000457,NM_178849,NM_178850,uc002xly.2,uc002xlz.2,uc002xma.2,uc010ggq.2_5end
|association_with_transcript=78bp_to_ENST00000316099,ENST00000338692,ENST00000415691,ENST00000443598,NM_000457,NM_178849,NM_178850,uc002xly.2,uc002xlz.2,uc002xma.2,uc010ggq.2_5end
|cluster_id=chr20:43030002..43030028,+
|cluster_id=chr20:43030002..43030028,+

Latest revision as of 08:01, 16 September 2015

Short description:p3@HNF4A
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_3_at_HNF4A_5end
Coexpression cluster:C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas
Association with transcript: 78bp_to_ENST00000316099, ENST00000338692, ENST00000415691, ENST00000443598, NM_000457, NM_178849, NM_178850, uc002xly.2, uc002xlz.2, uc002xma.2, uc010ggq.2_5end
EntrezGene:HNF4A
HGNC: 5024
UniProt: P41235E7ERE7F1D8T1F1D8S2
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data