FFCP PHASE1:Hg19::chr10:12237908..12237921,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8872 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=16827 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O75794 | ||
|association_with_transcript=-39bp_to_NM_006023,uc001ill.2,uc001ilm.2,uc009xja.2_5end | |association_with_transcript=-39bp_to_NM_006023,uc001ill.2,uc001ilm.2,uc009xja.2_5end | ||
|cluster_id=chr10:12237908..12237921,+ | |cluster_id=chr10:12237908..12237921,+ | ||
Latest revision as of 18:44, 16 September 2015
| Short description: | p3@CDC123 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_CDC123_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -39bp_to_NM_006023, uc001ill.2, uc001ilm.2, uc009xja.2_5end |
| EntrezGene: | CDC123 |
| HGNC: | 16827 |
| UniProt: | O75794 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p3@CDC123 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic stem cell | 1.27e-16 | 168 |
| hematopoietic cell | 2.38e-16 | 177 |
| hematopoietic oligopotent progenitor cell | 3.36e-13 | 161 |
| hematopoietic multipotent progenitor cell | 3.36e-13 | 161 |
| leukocyte | 7.64e-13 | 136 |
| lymphocyte of B lineage | 1.40e-10 | 24 |
| pro-B cell | 1.40e-10 | 24 |
| B cell | 2.99e-09 | 14 |
| precursor B cell | 3.15e-09 | 3 |
| hematopoietic lineage restricted progenitor cell | 7.43e-09 | 120 |
Showing 1 to 10 of 19 entries
| Ontology term | p-value | n |
|---|---|---|
| hematologic cancer | 1.37e-14 | 51 |
| immune system cancer | 1.37e-14 | 51 |
| leukemia | 9.32e-10 | 39 |
| lymphoma | 5.96e-08 | 10 |
| myeloid leukemia | 1.63e-07 | 31 |
Showing 1 to 5 of 5 entries
