FFCP PHASE1:Hg19::chr2:54785622..54785631,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6711 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11275 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q01082 | ||
|association_with_transcript=91bp_to_ENST00000333896,NM_178313,uc002rxx.2_5end | |association_with_transcript=91bp_to_ENST00000333896,NM_178313,uc002rxx.2_5end | ||
|cluster_id=chr2:54785622..54785631,+ | |cluster_id=chr2:54785622..54785631,+ | ||
Latest revision as of 15:48, 17 September 2015
| Short description: | p17@SPTBN1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_17_at_SPTBN1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 91bp_to_ENST00000333896, NM_178313, uc002rxx.2_5end |
| EntrezGene: | SPTBN1 |
| HGNC: | 11275 |
| UniProt: | Q01082 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p17@SPTBN1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| extraembryonic cell | 6.53e-12 | 19 |
| endodermal cell | 2.41e-07 | 58 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| extraembryonic structure | 1.08e-08 | 24 |
| amnion | 2.14e-08 | 7 |
| extraembryonic membrane | 4.09e-08 | 14 |
| membranous layer | 4.09e-08 | 14 |
| somatic layer of lateral plate mesoderm | 3.23e-07 | 8 |
Showing 1 to 5 of 5 entries
