FFCP PHASE1:Hg19::chr4:81952607..81952617,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1070 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P12645 | ||
|association_with_transcript=439bp_to_BC096269,BC096270,BC096271,BC117514_5end | |association_with_transcript=439bp_to_BC096269,BC096270,BC096271,BC117514_5end | ||
|cluster_id=chr4:81952607..81952617,+ | |cluster_id=chr4:81952607..81952617,+ | ||
Latest revision as of 22:40, 18 September 2015
| Short description: | p7@BMP3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_7_at_BMP3_5end |
| Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
| Association with transcript: | 439bp_to_BC096269, BC096270, BC096271, BC117514_5end |
| EntrezGene: | BMP3 |
| HGNC: | 1070 |
| UniProt: | P12645 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p7@BMP3 |
|---|
0.0
1.0
2.0
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4.0
5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| B-1 B cell | 2.55e-98 | 1 |
| mature B cell | 4.52e-50 | 2 |
| pre-B-II cell | 4.52e-50 | 2 |
| transitional stage B cell | 4.52e-50 | 2 |
| small pre-B-II cell | 4.52e-50 | 2 |
| immature B cell | 4.52e-50 | 2 |
| precursor B cell | 5.96e-34 | 3 |
| lymphocyte of B lineage | 1.03e-17 | 24 |
| pro-B cell | 1.03e-17 | 24 |
| lymphoid lineage restricted progenitor cell | 6.99e-09 | 52 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| lymphatic system cancer | 2.55e-98 | 1 |
| lymphosarcoma | 2.55e-98 | 1 |
| lymphoma | 2.00e-40 | 10 |
| hematologic cancer | 4.95e-09 | 51 |
| immune system cancer | 4.95e-09 | 51 |
Showing 1 to 5 of 5 entries
