FFCP PHASE2:Hg19::chr1:19229226..19229237,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:8659 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:406 |TSSclassi...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=406 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q5TF55 | ||
|association_with_transcript=-8bp_to_ENST00000432718_5end | |association_with_transcript=-8bp_to_ENST00000432718_5end | ||
|cluster_id=chr1:19229226..19229237,- | |cluster_id=chr1:19229226..19229237,- | ||
Latest revision as of 09:30, 19 September 2015
| Short description: | p4@ALDH4A1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_ALDH4A1_5end |
| Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
| Association with transcript: | -8bp_to_ENST00000432718_5end |
| EntrezGene: | ALDH4A1 |
| HGNC: | 406 |
| UniProt: | Q5TF55 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@ALDH4A1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fat cell | 3.43e-22 | 15 |
| hepatocyte | 3.47e-16 | 12 |
| subcutaneous fat cell | 1.97e-08 | 3 |
| adipocyte of omentum tissue | 4.23e-08 | 3 |
| epithelial cell of esophagus | 9.25e-07 | 1 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| liver | 1.01e-17 | 19 |
| digestive gland | 1.01e-17 | 19 |
| liver bud | 1.01e-17 | 19 |
| exocrine gland | 2.55e-16 | 31 |
| exocrine system | 2.55e-16 | 31 |
| hepatic diverticulum | 3.87e-15 | 22 |
| liver primordium | 3.87e-15 | 22 |
| digestive tract diverticulum | 2.00e-14 | 23 |
| epithelial sac | 3.58e-13 | 25 |
| epithelium of foregut-midgut junction | 3.58e-13 | 25 |
Showing 1 to 10 of 25 entries
