FFCP PHASE2:Hg19::chr6:10415276..10415341,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:7020 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11742 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=7020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11742 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9JXZ2 | ||
|association_with_transcript=-43bp_to_ENST00000498450_5end | |association_with_transcript=-43bp_to_ENST00000498450_5end | ||
|cluster_id=chr6:10415276..10415341,- | |cluster_id=chr6:10415276..10415341,- | ||
Latest revision as of 13:01, 19 September 2015
| Short description: | p2@TFAP2A |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_TFAP2A_5end |
| Coexpression cluster: | C2835_Melanocyte_myxofibrosarcoma_placenta_cervical_Corneal_breast_salivary |
| Association with transcript: | -43bp_to_ENST00000498450_5end |
| EntrezGene: | TFAP2A |
| HGNC: | 11742 |
| UniProt: | C9JXZ2 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@TFAP2A |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 1.75e-45 | 253 |
| ecto-epithelial cell | 2.64e-14 | 34 |
| endo-epithelial cell | 6.83e-14 | 42 |
| squamous epithelial cell | 2.13e-12 | 63 |
| embryonic cell | 2.95e-12 | 250 |
| mesothelial cell | 4.61e-09 | 19 |
| endodermal cell | 7.72e-09 | 58 |
| columnar/cuboidal epithelial cell | 3.57e-08 | 27 |
| general ecto-epithelial cell | 5.29e-08 | 14 |
| neurecto-epithelial cell | 6.89e-08 | 20 |
Showing 1 to 10 of 15 entries
| Ontology term | p-value | n |
|---|---|---|
| surface structure | 1.72e-15 | 99 |
| respiratory system | 5.54e-13 | 74 |
| endoderm-derived structure | 4.21e-10 | 160 |
| endoderm | 4.21e-10 | 160 |
| presumptive endoderm | 4.21e-10 | 160 |
| skin of body | 7.61e-10 | 41 |
| extraembryonic membrane | 4.55e-09 | 14 |
| membranous layer | 4.55e-09 | 14 |
| oral opening | 7.24e-09 | 22 |
| respiratory tract | 2.32e-08 | 54 |
Showing 1 to 10 of 23 entries
| Ontology term | p-value | n |
|---|---|---|
| cell type cancer | 7.28e-22 | 143 |
| carcinoma | 1.28e-16 | 106 |
| cancer | 3.13e-12 | 235 |
| disease of cellular proliferation | 6.67e-12 | 239 |
Showing 1 to 4 of 4 entries
