FFCP PHASE1:Hg19::chr5:134369905..134369972,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5307 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9004 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P78337 | ||
|association_with_transcript=0bp_to_NM_002653,uc010jea.2_5end | |association_with_transcript=0bp_to_NM_002653,uc010jea.2_5end | ||
|cluster_id=chr5:134369905..134369972,- | |cluster_id=chr5:134369905..134369972,- |
Latest revision as of 17:45, 24 September 2015
Short description: | p1@PITX1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PITX1_5end |
Coexpression cluster: | C4464_anaplastic_Prostate_esophagus_Smooth_glassy_cervical_biphenotypic |
Association with transcript: | 0bp_to_NM_002653, uc010jea.2_5end |
EntrezGene: | PITX1 |
HGNC: | 9004 |
UniProt: | P78337 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@PITX1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.85e-19 | 42 |
epithelial cell | 1.39e-18 | 253 |
endodermal cell | 1.39e-18 | 58 |
epithelial cell of alimentary canal | 2.73e-12 | 20 |
respiratory epithelial cell | 6.48e-07 | 13 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
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endoderm-derived structure | 2.30e-29 | 160 |
endoderm | 2.30e-29 | 160 |
presumptive endoderm | 2.30e-29 | 160 |
digestive system | 1.10e-27 | 145 |
digestive tract | 1.10e-27 | 145 |
primitive gut | 1.10e-27 | 145 |
subdivision of digestive tract | 4.22e-25 | 118 |
respiratory system | 1.57e-15 | 74 |
orifice | 2.07e-15 | 36 |
foregut | 2.07e-13 | 87 |
Showing 1 to 10 of 41 entries
Ontology term | p-value | n |
---|---|---|
cancer | 1.76e-31 | 235 |
disease of cellular proliferation | 5.19e-30 | 239 |
cell type cancer | 1.86e-26 | 143 |
carcinoma | 2.17e-25 | 106 |
squamous cell carcinoma | 6.61e-08 | 14 |
organ system cancer | 1.14e-07 | 137 |
Showing 1 to 6 of 6 entries