Personal tools

FFCP PHASE2:Hg19::chr5:137800912..137800941,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:1958 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:3238 |TSSclass...")
 
No edit summary
 
Line 2: Line 2:
|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:1958
|EntrezGene=1958
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=HGNC:3238
|HGNC=3238
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=uniprot:B4DNX4,uniprot:F5H5Y6
|UniProt=B4DNX4,F5H5Y6
|association_with_transcript=-227bp_to_ENST00000411801,ENST00000535792_5end
|association_with_transcript=-227bp_to_ENST00000411801,ENST00000535792_5end
|cluster_id=chr5:137800912..137800941,+
|cluster_id=chr5:137800912..137800941,+

Latest revision as of 22:38, 24 September 2015

Short description:p7@EGR1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_7_at_EGR1_5end
Coexpression cluster:NA
Association with transcript: -227bp_to_ENST00000411801, ENST00000535792_5end
EntrezGene:EGR1
HGNC: 3238
UniProt: B4DNX4F5H5Y6
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
1
2
3
4
5
6




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data