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DOID:3905

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Name:lung carcinoma
Namespace:FANTOM
Definition:"A lung cancer that is located_in the lungs and has_symptom cough and has_symptom chest discomfort or pain and has_symptom weight loss and has_symptom hemoptysis." [url:https://merck.com/mmpe/sec05/ch062/ch062b.html]
Xrefs:
links:

NCI:C4878
OMIM:211980
SNOMEDCT_2010_1_31:154485001
SNOMEDCT_2010_1_31:187875007
SNOMEDCT_2010_1_31:269561006

UMLS_CUI:C0684249
Synonyms: "cancer of lung" EXACT [NCI2004_11_17:C4878]
"carcinoma OF LUNG" EXACT [MTH:460]
"carcinoma of lung" RELATED []
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006]
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:1324(lung cancer)



Children


is a:DOID:3908 (non-small cell lung carcinoma),DOID:5409 (lung small cell carcinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3905 (lung carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.75e-45FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
4.35e-40FFCP PHASE2:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
4.35e-40FFCP PHASE1:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
2.66e-30FFCP PHASE2:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
2.66e-30FFCP PHASE1:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
2.66e-30FFCP PHASE2:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE1:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
3.09e-30FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.09e-30FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.59e-30FFCP PHASE1:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
3.59e-30FFCP PHASE2:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
7.5e-29FFCP PHASE2:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
7.5e-29FFCP PHASE1:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
8.14e-26FFCP PHASE2:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
8.14e-26FFCP PHASE1:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
3.17e-25FFCP PHASE2:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
3.17e-25FFCP PHASE1:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
2.62e-23FFCP PHASE2:Hg19::chr2:241625621..241625629,+#_ff13f51a990286586a726a44f2e602cap2@ENST00000407635
2.62e-23FFCP PHASE2:Hg19::chr10:36850273..36850276,-#_ff13f51a990286586a726a44f2e602cap@chr10:36850273..36850276, -
2.62e-23FFCP PHASE2:Hg19::chr9:129234745..129234747,-#_ff13f51a990286586a726a44f2e602cap@chr9:129234745..129234747, -
2.62e-23FFCP PHASE2:Hg19::chr7:111234799..111234807,-#_ff13f51a990286586a726a44f2e602cap@chr7:111234799..111234807, -
2.62e-23FFCP PHASE2:Hg19::chr3:63804973..63804980,+#_ff13f51a990286586a726a44f2e602cap3@C3orf49
2.62e-23FFCP PHASE2:Hg19::chr1:33886864..33886872,-#_ff13f51a990286586a726a44f2e602cap@chr1:33886864..33886872, -
2.62e-23FFCP PHASE2:Hg19::chr15:85564362..85564385,+#_ff13f51a990286586a726a44f2e602cap@chr15:85564362..85564385, +
2.62e-23FFCP PHASE1:Hg19::chr4:3838289..3838308,-#_ff13f51a990286586a726a44f2e602cap@chr4:3838289..3838308, -
2.62e-23FFCP PHASE1:Hg19::chr3:78360347..78360353,+#_ff13f51a990286586a726a44f2e602cap@chr3:78360347..78360353, +
2.62e-23FFCP PHASE2:Hg19::chr8:57525544..57525580,+#_ff13f51a990286586a726a44f2e602cap@chr8:57525544..57525580, +
2.62e-23FFCP PHASE2:Hg19::chr2:220695661..220695670,+#_ff13f51a990286586a726a44f2e602cap@chr2:220695661..220695670, +
2.62e-23FFCP PHASE2:Hg19::chr18:37420947..37420953,+#_ff13f51a990286586a726a44f2e602cap@chr18:37420947..37420953, +
2.62e-23FFCP PHASE1:Hg19::chr13:92569013..92569022,-#_ff13f51a990286586a726a44f2e602cap@chr13:92569013..92569022, -
2.62e-23FFCP PHASE2:Hg19::chr12:46124855..46124858,+#_ff13f51a990286586a726a44f2e602cap@chr12:46124855..46124858, +
2.62e-23FFCP PHASE1:Hg19::chr9:17454062..17454088,+#_ff13f51a990286586a726a44f2e602cap@chr9:17454062..17454088, +
2.62e-23FFCP PHASE1:Hg19::chr18:61368086..61368120,+#_ff13f51a990286586a726a44f2e602cap@chr18:61368086..61368120, +
2.62e-23FFCP PHASE1:Hg19::chr14:60194459..60194462,-#_ff13f51a990286586a726a44f2e602cap43@RTN1
2.62e-23FFCP PHASE2:Hg19::chr20:2779199..2779205,-#_ff13f51a990286586a726a44f2e602cap13@CPXM1
2.62e-23FFCP PHASE2:Hg19::chr16:3332452..3332454,+#_ff13f51a990286586a726a44f2e602cap@chr16:3332452..3332454, +
2.62e-23FFCP PHASE2:Hg19::chr14:60958049..60958051,-#_ff13f51a990286586a726a44f2e602cap@chr14:60958049..60958051, -
2.62e-23FFCP PHASE2:Hg19::chr10:129710296..129710320,-#_ff13f51a990286586a726a44f2e602cap@chr10:129710296..129710320, -
2.62e-23FFCP PHASE1:Hg19::chr7:26482715..26482738,-#_ff13f51a990286586a726a44f2e602cap@chr7:26482715..26482738, -
2.62e-23FFCP PHASE1:Hg19::chr4:139019174..139019198,-#_ff13f51a990286586a726a44f2e602cap@chr4:139019174..139019198, -
2.62e-23FFCP PHASE1:Hg19::chr2:135169581..135169587,+#_ff13f51a990286586a726a44f2e602cap@chr2:135169581..135169587, +
2.62e-23FFCP PHASE2:Hg19::chr8:98014001..98014041,-#_ff13f51a990286586a726a44f2e602cap@chr8:98014001..98014041, -
2.62e-23FFCP PHASE1:Hg19::chr1:188856590..188856595,-#_ff13f51a990286586a726a44f2e602cap4@ENST00000414765
2.62e-23FFCP PHASE2:Hg19::chr16:7354636..7354645,-#_ff13f51a990286586a726a44f2e602cap@chr16:7354636..7354645, -
2.62e-23FFCP PHASE1:Hg19::chr17:79974020..79974025,+#_ff13f51a990286586a726a44f2e602cap@chr17:79974020..79974025, +
2.62e-23FFCP PHASE2:Hg19::chr6:998859..998863,-#_ff13f51a990286586a726a44f2e602cap@chr6:998859..998863, -
2.62e-23FFCP PHASE2:Hg19::chr6:154729003..154729006,-#_ff13f51a990286586a726a44f2e602cap@chr6:154729003..154729006, -
2.62e-23FFCP PHASE1:Hg19::chrX:48394285..48394295,+#_ff13f51a990286586a726a44f2e602cap@chrX:48394285..48394295, +
2.62e-23FFCP PHASE1:Hg19::chr7:79840127..79840130,+#_ff13f51a990286586a726a44f2e602cap@chr7:79840127..79840130, +
2.62e-23FFCP PHASE1:Hg19::chr10:65821760..65821780,+#_ff13f51a990286586a726a44f2e602cap@chr10:65821760..65821780, +
2.62e-23FFCP PHASE1:Hg19::chr7:120379758..120379765,+#_ff13f51a990286586a726a44f2e602cap@chr7:120379758..120379765, +
2.62e-23FFCP PHASE1:Hg19::chr17:39140411..39140419,-#_ff13f51a990286586a726a44f2e602cap5@KRT40
2.62e-23FFCP PHASE2:Hg19::chr7:84651827..84651832,-#_ff13f51a990286586a726a44f2e602cap@chr7:84651827..84651832, -
2.62e-23FFCP PHASE2:Hg19::chr4:3344577..3344588,+#_ff13f51a990286586a726a44f2e602cap@chr4:3344577..3344588, +
2.62e-23FFCP PHASE2:Hg19::chr12:27925654..27925663,-#_ff13f51a990286586a726a44f2e602cap@chr12:27925654..27925663, -
2.62e-23FFCP PHASE1:Hg19::chr2:222127471..222127478,-#_ff13f51a990286586a726a44f2e602cap@chr2:222127471..222127478, -
2.62e-23FFCP PHASE1:Hg19::chr14:59132994..59133018,+#_ff13f51a990286586a726a44f2e602cap@chr14:59132994..59133018, +
2.62e-23FFCP PHASE2:Hg19::chr3:86703174..86703181,-#_ff13f51a990286586a726a44f2e602cap@chr3:86703174..86703181, -
2.62e-23FFCP PHASE2:Hg19::chr14:60194043..60194066,-#_ff13f51a990286586a726a44f2e602cap18@RTN1
2.62e-23FFCP PHASE2:Hg19::chr10:129703392..129703416,+#_ff13f51a990286586a726a44f2e602cap@chr10:129703392..129703416, +
2.62e-23FFCP PHASE1:Hg19::chr11:41519057..41519065,-#_ff13f51a990286586a726a44f2e602cap@chr11:41519057..41519065, -
2.62e-23FFCP PHASE2:Hg19::chr6:33644021..33644058,+#_ff13f51a990286586a726a44f2e602cap@chr6:33644021..33644058, +
2.62e-23FFCP PHASE2:Hg19::chr18:74671119..74671124,+#_ff13f51a990286586a726a44f2e602cap@chr18:74671119..74671124, +
2.62e-23FFCP PHASE2:Hg19::chr14:25326297..25326305,-#_ff13f51a990286586a726a44f2e602cap@chr14:25326297..25326305, -
2.62e-23FFCP PHASE1:Hg19::chrX:105065622..105065627,+#_ff13f51a990286586a726a44f2e602cap@chrX:105065622..105065627, +
2.62e-23FFCP PHASE1:Hg19::chr10:129704382..129704389,+#_ff13f51a990286586a726a44f2e602cap@chr10:129704382..129704389, +
2.62e-23FFCP PHASE1:Hg19::chr8:98015654..98015697,-#_ff13f51a990286586a726a44f2e602cap@chr8:98015654..98015697, -
2.62e-23FFCP PHASE1:Hg19::chr6:125547084..125547089,+#_ff13f51a990286586a726a44f2e602cap@chr6:125547084..125547089, +
2.62e-23FFCP PHASE1:Hg19::chr8:98066259..98066270,-#_ff13f51a990286586a726a44f2e602cap@chr8:98066259..98066270, -
2.62e-23FFCP PHASE1:Hg19::chr5:134920622..134920655,+#_ff13f51a990286586a726a44f2e602cap@chr5:134920622..134920655, +
2.62e-23FFCP PHASE1:Hg19::chr16:7428243..7428259,+#_ff13f51a990286586a726a44f2e602cap@chr16:7428243..7428259, +
2.62e-23FFCP PHASE2:Hg19::chrX:135761770..135761786,-#_ff13f51a990286586a726a44f2e602cap@chrX:135761770..135761786, -
2.62e-23FFCP PHASE2:Hg19::chr8:98108427..98108430,-#_ff13f51a990286586a726a44f2e602cap@chr8:98108427..98108430, -
2.62e-23FFCP PHASE1:Hg19::chr7:68735214..68735224,+#_ff13f51a990286586a726a44f2e602cap@chr7:68735214..68735224, +
2.62e-23FFCP PHASE1:Hg19::chr21:38295313..38295326,-#_ff13f51a990286586a726a44f2e602cap@chr21:38295313..38295326, -
2.62e-23FFCP PHASE2:Hg19::chr7:79839919..79839924,+#_ff13f51a990286586a726a44f2e602cap@chr7:79839919..79839924, +
2.62e-23FFCP PHASE1:Hg19::chr8:54464033..54464036,-#_ff13f51a990286586a726a44f2e602cap@chr8:54464033..54464036, -

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