FFCP PHASE1:Hg19::chr12:47473898..47473903,-
From FANTOM5_SSTAR
| Short description: | p11@AMIGO2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_11_at_AMIGO2_5end |
| Coexpression cluster: | C893_osteoclastoma_Urothelial_tubular_nonsmall_Mesenchymal_Renal_hepatic |
| Association with transcript: | -164bp_to_ENST00000429635, NM_001143668, NM_181847, uc001rpk.2, uc001rpl.2, uc001rpm.2_5end |
| EntrezGene: | AMIGO2 |
| HGNC: | 24073 |
| UniProt: | Q86SJ2 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p11@AMIGO2 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| transitional epithelial cell | 4.01e-19 | 4 |
| urothelial cell | 4.01e-19 | 4 |
| epithelial cell | 6.01e-07 | 253 |
| epithelial cell of Malassez | 6.36e-07 | 3 |
| Ontology term | p-value | n |
|---|---|---|
| urothelium | 6.15e-23 | 5 |
| transitional epithelium | 4.43e-19 | 6 |
| endo-epithelium | 4.59e-09 | 82 |
| Ontology term | p-value | n |
|---|---|---|
| tubular adenocarcinoma | 8.28e-11 | 2 |
| female reproductive organ cancer | 2.42e-07 | 27 |
| reproductive organ cancer | 9.02e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
