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DOID:3905

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Name:lung carcinoma
Namespace:FANTOM
Definition:"A lung cancer that is located_in the lungs and has_symptom cough and has_symptom chest discomfort or pain and has_symptom weight loss and has_symptom hemoptysis." [url:https://merck.com/mmpe/sec05/ch062/ch062b.html]
Xrefs:
links:

NCI:C4878
OMIM:211980
SNOMEDCT_2010_1_31:154485001
SNOMEDCT_2010_1_31:187875007
SNOMEDCT_2010_1_31:269561006

UMLS_CUI:C0684249
Synonyms: "cancer of lung" EXACT [NCI2004_11_17:C4878]
"carcinoma OF LUNG" EXACT [MTH:460]
"carcinoma of lung" RELATED []
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006]
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:1324(lung cancer)



Children


is a:DOID:3908 (non-small cell lung carcinoma),DOID:5409 (lung small cell carcinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3905 (lung carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.75e-45FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
4.35e-40FFCP PHASE2:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
4.35e-40FFCP PHASE1:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
2.66e-30FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE1:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
2.66e-30FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE1:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE2:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE2:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
3.09e-30FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.09e-30FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.59e-30FFCP PHASE1:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
3.59e-30FFCP PHASE2:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
7.5e-29FFCP PHASE1:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
7.5e-29FFCP PHASE2:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
8.14e-26FFCP PHASE1:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
8.14e-26FFCP PHASE2:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
3.17e-25FFCP PHASE1:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
3.17e-25FFCP PHASE2:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
2.62e-23FFCP PHASE1:Hg19::chr9:17454025..17454033,+#_ff13f51a990286586a726a44f2e602cap@chr9:17454025..17454033, +
2.62e-23FFCP PHASE1:Hg19::chr8:73794113..73794122,+#_ff13f51a990286586a726a44f2e602cap@chr8:73794113..73794122, +
2.62e-23FFCP PHASE1:Hg19::chr14:60194331..60194336,-#_ff13f51a990286586a726a44f2e602cap36@RTN1
2.62e-23FFCP PHASE2:Hg19::chr14:60194459..60194462,-#_ff13f51a990286586a726a44f2e602cap43@RTN1
2.62e-23FFCP PHASE2:Hg19::chr10:129704562..129704569,+#_ff13f51a990286586a726a44f2e602cap@chr10:129704562..129704569, +
2.62e-23FFCP PHASE1:Hg19::chr17:70940275..70940283,+#_ff13f51a990286586a726a44f2e602cap@chr17:70940275..70940283, +
2.62e-23FFCP PHASE2:Hg19::chr6:64762702..64762707,+#_ff13f51a990286586a726a44f2e602cap@chr6:64762702..64762707, +
2.62e-23FFCP PHASE2:Hg19::chr6:141715304..141715307,+#_ff13f51a990286586a726a44f2e602cap@chr6:141715304..141715307, +
2.62e-23FFCP PHASE1:Hg19::chr3:194808375..194808396,+#_ff13f51a990286586a726a44f2e602cap@chr3:194808375..194808396, +
2.62e-23FFCP PHASE2:Hg19::chr8:38459926..38459928,+#_ff13f51a990286586a726a44f2e602cap@chr8:38459926..38459928, +
2.62e-23FFCP PHASE2:Hg19::chr2:202413051..202413061,-#_ff13f51a990286586a726a44f2e602cap@chr2:202413051..202413061, -
2.62e-23FFCP PHASE2:Hg19::chr18:10085799..10085809,+#_ff13f51a990286586a726a44f2e602cap@chr18:10085799..10085809, +
2.62e-23FFCP PHASE1:Hg19::chr12:84664596..84664600,+#_ff13f51a990286586a726a44f2e602cap@chr12:84664596..84664600, +
2.62e-23FFCP PHASE2:Hg19::chr17:39140424..39140431,-#_ff13f51a990286586a726a44f2e602cap4@KRT40
2.62e-23FFCP PHASE2:Hg19::chr12:84664700..84664710,+#_ff13f51a990286586a726a44f2e602cap1@ENST00000547882
2.62e-23FFCP PHASE1:Hg19::chr6:154729003..154729006,-#_ff13f51a990286586a726a44f2e602cap@chr6:154729003..154729006, -
2.62e-23FFCP PHASE1:Hg19::chr2:192805239..192805246,+#_ff13f51a990286586a726a44f2e602cap@chr2:192805239..192805246, +
2.62e-23FFCP PHASE2:Hg19::chr3:86701885..86701893,-#_ff13f51a990286586a726a44f2e602cap@chr3:86701885..86701893, -
2.62e-23FFCP PHASE2:Hg19::chr3:102635409..102635414,-#_ff13f51a990286586a726a44f2e602cap@chr3:102635409..102635414, -
2.62e-23FFCP PHASE1:Hg19::chr7:84651827..84651832,-#_ff13f51a990286586a726a44f2e602cap@chr7:84651827..84651832, -
2.62e-23FFCP PHASE1:Hg19::chr4:3344577..3344588,+#_ff13f51a990286586a726a44f2e602cap@chr4:3344577..3344588, +
2.62e-23FFCP PHASE1:Hg19::chr15:97503439..97503472,+#_ff13f51a990286586a726a44f2e602cap@chr15:97503439..97503472, +
2.62e-23FFCP PHASE2:Hg19::chr6:31681859..31681865,-#_ff13f51a990286586a726a44f2e602cap3@LY6G6E
2.62e-23FFCP PHASE1:Hg19::chr18:39798771..39798780,-#_ff13f51a990286586a726a44f2e602cap@chr18:39798771..39798780, -
2.62e-23FFCP PHASE1:Hg19::chr14:59113338..59113345,+#_ff13f51a990286586a726a44f2e602cap@chr14:59113338..59113345, +
2.62e-23FFCP PHASE2:Hg19::chr17:70939741..70939790,-#_ff13f51a990286586a726a44f2e602cap@chr17:70939741..70939790, -
2.62e-23FFCP PHASE2:Hg19::chr14:59132994..59133018,+#_ff13f51a990286586a726a44f2e602cap@chr14:59132994..59133018, +
2.62e-23FFCP PHASE2:Hg19::chr10:129703363..129703373,+#_ff13f51a990286586a726a44f2e602cap@chr10:129703363..129703373, +
2.62e-23FFCP PHASE1:Hg19::chr2:130568628..130568649,+#_ff13f51a990286586a726a44f2e602cap@chr2:130568628..130568649, +
2.62e-23FFCP PHASE1:Hg19::chr20:2779236..2779242,-#_ff13f51a990286586a726a44f2e602cap12@CPXM1
2.62e-23FFCP PHASE1:Hg19::chr17:63528638..63528642,+#_ff13f51a990286586a726a44f2e602cap@chr17:63528638..63528642, +
2.62e-23FFCP PHASE2:Hg19::chr8:98073725..98073731,-#_ff13f51a990286586a726a44f2e602cap@chr8:98073725..98073731, -
2.62e-23FFCP PHASE2:Hg19::chr2:33589897..33589917,+#_ff13f51a990286586a726a44f2e602cap@chr2:33589897..33589917, +
2.62e-23FFCP PHASE2:Hg19::chr19:46763803..46763808,-#_ff13f51a990286586a726a44f2e602cap@chr19:46763803..46763808, -
2.62e-23FFCP PHASE1:Hg19::chr9:9763035..9763040,-#_ff13f51a990286586a726a44f2e602cap@chr9:9763035..9763040, -
2.62e-23FFCP PHASE1:Hg19::chr8:98015305..98015315,-#_ff13f51a990286586a726a44f2e602cap@chr8:98015305..98015315, -
2.62e-23FFCP PHASE1:Hg19::chr6:45398505..45398508,+#_ff13f51a990286586a726a44f2e602cap@chr6:45398505..45398508, +
2.62e-23FFCP PHASE1:Hg19::chr3:186548894..186548902,+#_ff13f51a990286586a726a44f2e602cap@chr3:186548894..186548902, +
2.62e-23FFCP PHASE1:Hg19::chr1:188856517..188856523,-#_ff13f51a990286586a726a44f2e602cap1@ENST00000414765
2.62e-23FFCP PHASE2:Hg19::chr4:178653531..178653568,+#_ff13f51a990286586a726a44f2e602cap@chr4:178653531..178653568, +
2.62e-23FFCP PHASE2:Hg19::chr2:192805223..192805230,+#_ff13f51a990286586a726a44f2e602cap@chr2:192805223..192805230, +
2.62e-23FFCP PHASE2:Hg19::chr21:43917055..43917058,-#_ff13f51a990286586a726a44f2e602cap@chr21:43917055..43917058, -
2.62e-23FFCP PHASE2:Hg19::chr17:9716257..9716264,-#_ff13f51a990286586a726a44f2e602cap@chr17:9716257..9716264, -
2.62e-23FFCP PHASE2:Hg19::chr12:79756349..79756364,-#_ff13f51a990286586a726a44f2e602cap@chr12:79756349..79756364, -
2.62e-23FFCP PHASE1:Hg19::chr8:98108427..98108430,-#_ff13f51a990286586a726a44f2e602cap@chr8:98108427..98108430, -
2.62e-23FFCP PHASE1:Hg19::chr17:13574618..13574636,-#_ff13f51a990286586a726a44f2e602cap@chr17:13574618..13574636, -
2.62e-23FFCP PHASE2:Hg19::chr3:77129779..77129782,+#_ff13f51a990286586a726a44f2e602cap@chr3:77129779..77129782, +
2.62e-23FFCP PHASE2:Hg19::chr2:97626499..97626505,-#_ff13f51a990286586a726a44f2e602cap@chr2:97626499..97626505, -
2.62e-23FFCP PHASE1:Hg19::chr7:79839919..79839924,+#_ff13f51a990286586a726a44f2e602cap@chr7:79839919..79839924, +
2.62e-23FFCP PHASE1:Hg19::chr7:120378721..120378730,-#_ff13f51a990286586a726a44f2e602cap@chr7:120378721..120378730, -
2.62e-23FFCP PHASE1:Hg19::chr1:33886874..33886882,-#_ff13f51a990286586a726a44f2e602cap@chr1:33886874..33886882, -
2.62e-23FFCP PHASE2:Hg19::chr5:79097476..79097484,+#_ff13f51a990286586a726a44f2e602cap@chr5:79097476..79097484, +
2.62e-23FFCP PHASE2:Hg19::chr13:25269257..25269262,+#_ff13f51a990286586a726a44f2e602cap@chr13:25269257..25269262, +
2.62e-23FFCP PHASE1:Hg19::chr8:57525935..57525942,+#_ff13f51a990286586a726a44f2e602cap@chr8:57525935..57525942, +
2.62e-23FFCP PHASE1:Hg19::chr5:5558678..5558683,+#_ff13f51a990286586a726a44f2e602cap@chr5:5558678..5558683, +
2.62e-23FFCP PHASE1:Hg19::chr7:95775942..95775990,-#_ff13f51a990286586a726a44f2e602cap@chr7:95775942..95775990, -
2.62e-23FFCP PHASE1:Hg19::chr2:103235211..103235247,+#_ff13f51a990286586a726a44f2e602cap@chr2:103235211..103235247, +
2.62e-23FFCP PHASE2:Hg19::chr8:98014001..98014041,-#_ff13f51a990286586a726a44f2e602cap@chr8:98014001..98014041, -
2.62e-23FFCP PHASE2:Hg19::chr2:241625621..241625629,+#_ff13f51a990286586a726a44f2e602cap2@ENST00000407635
2.62e-23FFCP PHASE1:Hg19::chr13:92569013..92569022,-#_ff13f51a990286586a726a44f2e602cap@chr13:92569013..92569022, -

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