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Coexpression cluster:C52: Difference between revisions

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|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
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|tfbs_overrepresentation_for_novel_motifs=0.000164241,0.000191305,0.0028864,4.58184,2.22895,0.946501,0.0129191,0.935269,0.0625594,5.14706e-11,0.000694062,0.416992,0.0194744,0.10463,1.65145,0.430427,0.0062065,3.22118,0.0280085,0.429436,1.22748,0.00577115,0.0460191,4.16066,0.0078842,0.0435557,0.245964,0.044003,0.00205056,0.0425734,0.0458276,0.070849,0.000176914,0.0683476,0.010739,0.00166736,2.06518e-07,0.0860381,1.57357,3.06404e-07,0.715293,0.000161808,0.710378,0.899996,0.011623,0.00881747,0.0264958,0.00289597,5.14634,0.0837285,0.0945114,0.0587578,0.148647,0.145382,0.399306,0.0219142,1.17498,0.038202,0.220119,0.000668556,0.0182734,0.013898,0.166358,0.0129542,0.0674124,19.9852,0.186646,0.387109,1.38829,0.0594381,9.18899e-05,2.65724,7.86925e-09,0.61878,6.3406e-11,0.0570271,0.326021,0.105295,1.66131,0.497062,1.017,0.450264,5.78693,1.21431,0.0228867,0,8.66321e-08,0.151964,0.416087,0.172645,1.69963,0.247986,0.780381,4.10787,3.5101e-06,1.17698,0.425186,0.125451,0.0829035,0.0544601,1.31207,0.554383,0.119453,0.172207,0.130378,2.85134e-06,0.00109175,0.215212,0.000885381,3.61742e-06,0.252906,1.2127,0.297249,0.0870131,0.237727,0.349688,2.53136e-14,0.339091,0.0836485,0.783651,0.377842,0.127475,0.0801505,2.7127,0.691637,0.0263008,0.113096,0.0143456,0.723253,0.280784,0.249121,1.11601,0.295686,0.12169,0.31676,0.000721219,0.610792,0.589756,0.106839,0.492677,1.10873,1.3831,3.70715,0.520862,0.0173027,0.187935,0.876368,0.367204,0.51442,3.76209e-06,1.49139e-05,0,1.85308,0.155289,0.269023,0.52297,0.48487,5.79967,0.0141477,6.21921e-07,0.0189292,0.368843,0.118362,2.10436,0.503472,0.437088,0.000385055,0.0775614,0
}}
}}

Revision as of 13:14, 26 November 2012


Full id: C52_adult_NK_chronic_cord_testis_embryonic_myeloma



Phase1 CAGE Peaks

Hg19::chr10:112189408..112189426,+p@chr10:112189408..112189426
+
Hg19::chr10:19239967..19239971,-p@chr10:19239967..19239971
-
Hg19::chr10:27660545..27660551,+p@chr10:27660545..27660551
+
Hg19::chr10:3094259..3094288,+p@chr10:3094259..3094288
+
Hg19::chr10:34637963..34637998,-p@chr10:34637963..34637998
-
Hg19::chr10:38027223..38027230,+p@chr10:38027223..38027230
+
Hg19::chr10:6104459..6104475,-p3@IL2RA
Hg19::chr10:6104480..6104485,-p5@IL2RA
Hg19::chr10:6104492..6104499,-p4@IL2RA
Hg19::chr10:73479737..73479747,-p3@C10orf105
Hg19::chr11:103213136..103213143,+p@chr11:103213136..103213143
+
Hg19::chr11:119986286..119986297,-p@chr11:119986286..119986297
-
Hg19::chr11:119991638..119991645,-p61@TRIM29
Hg19::chr11:46193466..46193478,+p1@ENST00000533793
Hg19::chr12:131856861..131856875,+p@chr12:131856861..131856875
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Hg19::chr12:30993607..30993610,-p@chr12:30993607..30993610
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Hg19::chr12:38493344..38493353,+p@chr12:38493344..38493353
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Hg19::chr12:49158521..49158560,+p@chr12:49158521..49158560
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Hg19::chr12:92455709..92455717,-p@chr12:92455709..92455717
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Hg19::chr13:110586184..110586198,-p@chr13:110586184..110586198
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Hg19::chr13:110617261..110617267,+p@chr13:110617261..110617267
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Hg19::chr13:110645796..110645802,+p@chr13:110645796..110645802
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Hg19::chr13:110707570..110707589,-p@chr13:110707570..110707589
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Hg19::chr13:110709644..110709665,-p@chr13:110709644..110709665
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Hg19::chr13:110709672..110709683,-p@chr13:110709672..110709683
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Hg19::chr13:111616788..111616817,+p@chr13:111616788..111616817
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Hg19::chr13:111668995..111669008,+p@chr13:111668995..111669008
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Hg19::chr13:26150348..26150390,+p@chr13:26150348..26150390
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Hg19::chr13:26312285..26312294,+p@chr13:26312285..26312294
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Hg19::chr13:51677021..51677026,-p@chr13:51677021..51677026
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Hg19::chr13:51685054..51685062,+p@chr13:51685054..51685062
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Hg19::chr13:51685075..51685085,+p@chr13:51685075..51685085
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Hg19::chr13:63632805..63632810,-p@chr13:63632805..63632810
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Hg19::chr14:104617506..104617582,+p@chr14:104617506..104617582
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Hg19::chr14:21578189..21578193,+p@chr14:21578189..21578193
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Hg19::chr14:22538811..22538825,+p1@TRAV22
Hg19::chr14:22538852..22538859,+p3@TRAV22
Hg19::chr14:22538863..22538874,+p2@uc001wcy.2
Hg19::chr14:22538896..22538915,+p1@uc001wcy.2
Hg19::chr14:22538931..22538943,+p2@TRAV22
Hg19::chr14:22591032..22591043,+p1@TRAV26-1
Hg19::chr14:92973731..92973751,-p@chr14:92973731..92973751
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Hg19::chr14:93095766..93095768,-p@chr14:93095766..93095768
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Hg19::chr14:93366565..93366568,-p@chr14:93366565..93366568
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Hg19::chr15:29978971..29978978,+p@chr15:29978971..29978978
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Hg19::chr15:30010696..30010715,-p@chr15:30010696..30010715
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Hg19::chr15:30010739..30010760,-p@chr15:30010739..30010760
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Hg19::chr15:30010762..30010785,-p@chr15:30010762..30010785
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Hg19::chr15:30010863..30010881,-p@chr15:30010863..30010881
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Hg19::chr15:47588167..47588193,-p@chr15:47588167..47588193
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Hg19::chr15:47588212..47588225,-p@chr15:47588212..47588225
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Hg19::chr15:68188457..68188465,+p@chr15:68188457..68188465
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Hg19::chr15:70885610..70885622,+p@chr15:70885610..70885622
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Hg19::chr15:71506595..71506599,+p@chr15:71506595..71506599
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Hg19::chr15:74632581..74632587,-p@chr15:74632581..74632587
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Hg19::chr15:81706926..81706931,+p@chr15:81706926..81706931
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Hg19::chr15:93253904..93253907,-p@chr15:93253904..93253907
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Hg19::chr15:99670119..99670130,+p@chr15:99670119..99670130
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Hg19::chr15:99696483..99696527,-p6@TTC23
Hg19::chr16:23505713..23505725,-p@chr16:23505713..23505725
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Hg19::chr16:89584495..89584539,+p@chr16:89584495..89584539
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Hg19::chr17:12791792..12791805,+p@chr17:12791792..12791805
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Hg19::chr17:12791814..12791823,+p@chr17:12791814..12791823
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Hg19::chr17:12796834..12796843,+p@chr17:12796834..12796843
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Hg19::chr17:12796847..12796852,+p@chr17:12796847..12796852
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Hg19::chr17:12799691..12799699,+p@chr17:12799691..12799699
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Hg19::chr17:12799705..12799718,+p@chr17:12799705..12799718
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Hg19::chr17:15048765..15048797,+p@chr17:15048765..15048797
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Hg19::chr17:20985587..20985592,+p@chr17:20985587..20985592
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Hg19::chr17:22069559..22069568,-p@chr17:22069559..22069568
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Hg19::chr17:31241553..31241555,+p@chr17:31241553..31241555
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Hg19::chr17:6918813..6918828,+p12@C17orf49
Hg19::chr17:70070930..70070937,-p@chr17:70070930..70070937
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Hg19::chr18:12060071..12060081,+p@chr18:12060071..12060081
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Hg19::chr18:19070148..19070196,+p@chr18:19070148..19070196
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Hg19::chr18:21687542..21687545,+p@chr18:21687542..21687545
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Hg19::chr18:25161980..25161984,-p@chr18:25161980..25161984
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Hg19::chr18:25243552..25243557,-p@chr18:25243552..25243557
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Hg19::chr18:25253411..25253416,-p@chr18:25253411..25253416
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Hg19::chr18:26941884..26941895,-p@chr18:26941884..26941895
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Hg19::chr18:26941900..26941909,-p@chr18:26941900..26941909
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Hg19::chr18:26941976..26941994,-p@chr18:26941976..26941994
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Hg19::chr18:3230742..3230747,+p@chr18:3230742..3230747
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Hg19::chr18:40886028..40886037,+p@chr18:40886028..40886037
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Hg19::chr18:40886039..40886048,+p@chr18:40886039..40886048
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Hg19::chr18:40948143..40948159,+p@chr18:40948143..40948159
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Hg19::chr18:40948160..40948172,+p@chr18:40948160..40948172
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Hg19::chr18:45986464..45986492,+p@chr18:45986464..45986492
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Hg19::chr18:47725835..47725856,-p@chr18:47725835..47725856
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Hg19::chr18:47725878..47725903,-p@chr18:47725878..47725903
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Hg19::chr18:56494810..56494816,-p@chr18:56494810..56494816
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Hg19::chr18:69661949..69661953,-p@chr18:69661949..69661953
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Hg19::chr18:69854903..69854906,-p@chr18:69854903..69854906
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Hg19::chr18:69858626..69858628,-p@chr18:69858626..69858628
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Hg19::chr18:69868107..69868111,-p@chr18:69868107..69868111
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Hg19::chr18:69872774..69872778,-p@chr18:69872774..69872778
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Hg19::chr18:69876380..69876383,-p@chr18:69876380..69876383
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Hg19::chr18:69877254..69877262,+p@chr18:69877254..69877262
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Hg19::chr19:23695418..23695428,-p@chr19:23695418..23695428
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Hg19::chr19:23973420..23973429,+p1@ENST00000472297
Hg19::chr19:23973442..23973445,+p2@ENST00000472297
Hg19::chr19:374052..374070,-p1@THEG
Hg19::chr19:374072..374083,-p3@THEG
Hg19::chr19:374095..374106,-p4@THEG
Hg19::chr19:374243..374250,+p@chr19:374243..374250
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Hg19::chr19:376641..376651,-p@chr19:376641..376651
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Hg19::chr19:4164438..4164440,+p@chr19:4164438..4164440
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Hg19::chr19:45231555..45231562,-p@chr19:45231555..45231562
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Hg19::chr19:56538400..56538418,+p@chr19:56538400..56538418
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Hg19::chr19:756791..756838,+p@chr19:756791..756838
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Hg19::chr19:7816413..7816424,+p@chr19:7816413..7816424
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Hg19::chr19:7816457..7816480,+p@chr19:7816457..7816480
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Hg19::chr1:100915125..100915132,-p@chr1:100915125..100915132
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Hg19::chr1:100915235..100915246,-p@chr1:100915235..100915246
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Hg19::chr1:117348975..117348994,-p@chr1:117348975..117348994
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Hg19::chr1:14956065..14956093,+p@chr1:14956065..14956093
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Hg19::chr1:154408297..154408305,+p@chr1:154408297..154408305
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Hg19::chr1:179370897..179370904,+p@chr1:179370897..179370904
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Hg19::chr1:201757064..201757082,-p@chr1:201757064..201757082
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Hg19::chr1:234730489..234730506,-p@chr1:234730489..234730506
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Hg19::chr1:25883469..25883474,+p@chr1:25883469..25883474
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Hg19::chr1:29610235..29610246,+p10@PTPRU
Hg19::chr1:34632588..34632599,+p3@C1orf94
Hg19::chr1:34632610..34632638,+p2@C1orf94
Hg19::chr1:34662821..34662825,+p6@C1orf94
Hg19::chr1:54922952..54922996,-p@chr1:54922952..54922996
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Hg19::chr1:93054640..93054674,-p@chr1:93054640..93054674
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Hg19::chr20:4115839..4115842,+p@chr20:4115839..4115842
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Hg19::chr20:4115847..4115854,+p@chr20:4115847..4115854
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Hg19::chr20:55403726..55403730,+p@chr20:55403726..55403730
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Hg19::chr20:62666902..62666913,+p10@LINC00176
Hg19::chr21:20827773..20827777,-p@chr21:20827773..20827777
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Hg19::chr21:20852770..20852777,-p@chr21:20852770..20852777
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Hg19::chr21:20866297..20866319,-p@chr21:20866297..20866319
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Hg19::chr21:20866711..20866716,+p@chr21:20866711..20866716
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Hg19::chr21:47347471..47347482,-p@chr21:47347471..47347482
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Hg19::chr21:47365834..47365846,-p@chr21:47365834..47365846
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Hg19::chr21:47365866..47365887,-p@chr21:47365866..47365887
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Hg19::chr21:47365891..47365905,-p@chr21:47365891..47365905
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Hg19::chr21:47365922..47365928,-p@chr21:47365922..47365928
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Hg19::chr21:47410794..47410799,+p@chr21:47410794..47410799
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Hg19::chr21:47924311..47924326,+p2@DIP2A
Hg19::chr22:18913029..18913039,-p@chr22:18913029..18913039
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Hg19::chr22:29264564..29264568,-p@chr22:29264564..29264568
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Hg19::chr22:34270322..34270326,-p@chr22:34270322..34270326
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Hg19::chr22:34270355..34270401,-p@chr22:34270355..34270401
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Hg19::chr22:45106642..45106649,-p@chr22:45106642..45106649
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Hg19::chr22:45258957..45258993,-p@chr22:45258957..45258993
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Hg19::chr22:46016731..46016736,-p@chr22:46016731..46016736
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Hg19::chr2:127790367..127790404,+p@chr2:127790367..127790404
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Hg19::chr2:1377544..1377553,+p17@TPO
Hg19::chr2:1445829..1445833,+p@chr2:1445829..1445833
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Hg19::chr2:1500145..1500152,+p@chr2:1500145..1500152
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Hg19::chr2:1500169..1500183,+p@chr2:1500169..1500183
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Hg19::chr2:1500194..1500206,+p@chr2:1500194..1500206
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Hg19::chr2:15012923..15012956,-p@chr2:15012923..15012956
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Hg19::chr2:15013175..15013201,-p@chr2:15013175..15013201
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Hg19::chr2:1520572..1520600,+p@chr2:1520572..1520600
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Hg19::chr2:1520621..1520628,+p@chr2:1520621..1520628
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Hg19::chr2:158343898..158343909,-p@chr2:158343898..158343909
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Hg19::chr2:158343918..158343927,-p@chr2:158343918..158343927
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Hg19::chr2:158343934..158343940,-p@chr2:158343934..158343940
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Hg19::chr2:197340431..197340432,-p@chr2:197340431..197340432
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Hg19::chr2:197823357..197823368,-p@chr2:197823357..197823368
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Hg19::chr2:227513701..227513706,+p@chr2:227513701..227513706
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Hg19::chr2:34022913..34022919,+p@chr2:34022913..34022919
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Hg19::chr2:3714939..3714981,-p@chr2:3714939..3714981
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Hg19::chr2:52234734..52234740,+p@chr2:52234734..52234740
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Hg19::chr2:52812446..52812455,-p@chr2:52812446..52812455
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Hg19::chr2:53244329..53244334,-p@chr2:53244329..53244334
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Hg19::chr2:53318401..53318420,-p@chr2:53318401..53318420
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Hg19::chr2:62269106..62269114,-p@chr2:62269106..62269114
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Hg19::chr2:65728058..65728073,+p@chr2:65728058..65728073
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Hg19::chr2:70900377..70900392,+p@chr2:70900377..70900392
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Hg19::chr2:70900405..70900410,+p@chr2:70900405..70900410
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Hg19::chr2:85926535..85926541,-p@chr2:85926535..85926541
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Hg19::chr2:85926542..85926554,-p@chr2:85926542..85926554
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Hg19::chr2:89157785..89157798,-p1@X96754
Hg19::chr2:89165162..89165171,-p8@ENST00000430694
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Hg19::chr2:89165286..89165293,-p12@ENST00000430694
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Hg19::chr2:89165339..89165344,-p13@ENST00000430694
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Hg19::chr2:89165404..89165409,-p14@ENST00000430694
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Hg19::chr3:101698100..101698110,+p@chr3:101698100..101698110
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Hg19::chr3:101698119..101698127,+p@chr3:101698119..101698127
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Hg19::chr3:10392369..10392376,-p@chr3:10392369..10392376
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Hg19::chr3:10392377..10392387,-p@chr3:10392377..10392387
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Hg19::chr3:121796074..121796077,-p@chr3:121796074..121796077
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Hg19::chr3:13694356..13694401,-p@chr3:13694356..13694401
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Hg19::chr3:159786460..159786470,+p@chr3:159786460..159786470
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Hg19::chr3:161283841..161283854,+p@chr3:161283841..161283854
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Hg19::chr3:161294908..161294917,-p@chr3:161294908..161294917
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Hg19::chr3:161309546..161309550,-p@chr3:161309546..161309550
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Hg19::chr3:161318132..161318143,+p@chr3:161318132..161318143
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Hg19::chr3:161318150..161318179,+p@chr3:161318150..161318179
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Hg19::chr3:161392090..161392095,+p@chr3:161392090..161392095
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Hg19::chr3:161408998..161409000,+p@chr3:161408998..161409000
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Hg19::chr3:161460708..161460712,+p@chr3:161460708..161460712
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Hg19::chr3:161529625..161529628,+p@chr3:161529625..161529628
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Hg19::chr3:190993203..190993227,-p@chr3:190993203..190993227
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Hg19::chr3:191000491..191000512,-p6@UTS2D
Hg19::chr3:38675107..38675137,-p3@SCN5A
Hg19::chr3:39371176..39371183,+p4@CCR8
Hg19::chr3:39371191..39371212,+p2@CCR8
Hg19::chr3:39371255..39371266,+p3@CCR8
Hg19::chr3:4898478..4898486,-p1@ENST00000465436
Hg19::chr3:4927447..4927479,-p1@ENST00000449914
Hg19::chr3:49340163..49340172,-p@chr3:49340163..49340172
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Hg19::chr3:49340177..49340187,-p@chr3:49340177..49340187
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Hg19::chr3:49625039..49625044,-p@chr3:49625039..49625044
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Hg19::chr3:61556694..61556702,+p@chr3:61556694..61556702
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Hg19::chr3:61602894..61602920,+p@chr3:61602894..61602920
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Hg19::chr3:61602931..61602940,+p@chr3:61602931..61602940
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Hg19::chr3:61603162..61603195,+p@chr3:61603162..61603195
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Hg19::chr3:61623316..61623327,+p@chr3:61623316..61623327
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Hg19::chr3:61626942..61626951,+p@chr3:61626942..61626951
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Hg19::chr3:97687405..97687428,-p@chr3:97687405..97687428
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Hg19::chr3:97687455..97687458,-p@chr3:97687455..97687458
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Hg19::chr3:97690850..97690873,-p5@MINA
Hg19::chr3:97690939..97690946,-p8@MINA
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Hg19::chr4:1250163..1250171,+p@chr4:1250163..1250171
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Hg19::chr4:178148315..178148320,-p@chr4:178148315..178148320
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Hg19::chr4:18419509..18419512,-p@chr4:18419509..18419512
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Hg19::chr4:187680759..187680766,+p@chr4:187680759..187680766
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Hg19::chr4:2056075..2056082,-p@chr4:2056075..2056082
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Hg19::chr4:6174579..6174583,+p@chr4:6174579..6174583
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Hg19::chr4:6179706..6179711,-p@chr4:6179706..6179711
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Hg19::chr4:7123999..7124002,+p@chr4:7123999..7124002
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Hg19::chr4:7124009..7124013,+p@chr4:7124009..7124013
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Hg19::chr5:115383312..115383337,+p@chr5:115383312..115383337
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Hg19::chr5:16901509..16901524,-p@chr5:16901509..16901524
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Hg19::chr5:175612149..175612227,-p1@ENST00000510850
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Hg19::chr5:80924053..80924056,-p@chr5:80924053..80924056
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Hg19::chr6:13230218..13230229,+p@chr6:13230218..13230229
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Hg19::chr6:15135428..15135449,-p@chr6:15135428..15135449
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Hg19::chr6:152961829..152961838,+p@chr6:152961829..152961838
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Hg19::chr6:161347970..161347980,+p@chr6:161347970..161347980
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Hg19::chr6:161736275..161736279,-p@chr6:161736275..161736279
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Hg19::chr6:33096318..33096350,+p@chr6:33096318..33096350
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Hg19::chr6:57372069..57372092,+p@chr6:57372069..57372092
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Hg19::chr6:57440646..57440650,+p@chr6:57440646..57440650
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Hg19::chr6:6606280..6606286,-p@chr6:6606280..6606286
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Hg19::chr6:66618141..66618173,-p@chr6:66618141..66618173
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Hg19::chr6:66637170..66637178,-p@chr6:66637170..66637178
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Hg19::chr6:66637209..66637223,-p@chr6:66637209..66637223
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Hg19::chr6:93434288..93434299,+p@chr6:93434288..93434299
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Hg19::chr7:105440971..105440979,-p@chr7:105440971..105440979
-
Hg19::chr7:105441012..105441027,-p@chr7:105441012..105441027
-
Hg19::chr7:105441033..105441046,-p@chr7:105441033..105441046
-
Hg19::chr7:105441051..105441056,-p@chr7:105441051..105441056
-
Hg19::chr7:105448057..105448077,+p@chr7:105448057..105448077
+
Hg19::chr7:107431560..107431575,-p@chr7:107431560..107431575
-
Hg19::chr7:107431592..107431600,-p@chr7:107431592..107431600
-
Hg19::chr7:111646277..111646299,-p@chr7:111646277..111646299
-
Hg19::chr7:135787945..135787950,+p@chr7:135787945..135787950
+
Hg19::chr7:137030541..137030575,-p@chr7:137030541..137030575
-
Hg19::chr7:138124213..138124244,+p@chr7:138124213..138124244
+
Hg19::chr7:142206567..142206570,-p4@uc011ksc.1
Hg19::chr7:142206670..142206682,-p1@uc011ksc.1
Hg19::chr7:142206739..142206746,-p2@uc011ksc.1
Hg19::chr7:142206976..142206984,-p1@uc003vyj.2
Hg19::chr7:142207004..142207033,-p1@TRBV10-2
Hg19::chr7:142207043..142207046,-p3@TRBV10-2
Hg19::chr7:148133781..148133792,-p@chr7:148133781..148133792
-
Hg19::chr7:156898363..156898368,+p1@AK130204
Hg19::chr7:171678..171698,+p@chr7:171678..171698
+
Hg19::chr7:27953048..27953089,-p@chr7:27953048..27953089
-
Hg19::chr7:4573373..4573383,+p@chr7:4573373..4573383
+
Hg19::chr7:63459221..63459237,+p@chr7:63459221..63459237
+
Hg19::chr7:70060849..70060859,+p@chr7:70060849..70060859
+
Hg19::chr7:70203417..70203427,+p@chr7:70203417..70203427
+
Hg19::chr7:70250599..70250641,+p@chr7:70250599..70250641
+
Hg19::chr7:70358448..70358468,-p@chr7:70358448..70358468
-
Hg19::chr7:71868415..71868431,-p13@CALN1
Hg19::chr7:71868448..71868454,-p33@CALN1
Hg19::chr7:91209299..91209339,-p@chr7:91209299..91209339
-
Hg19::chr8:103075001..103075005,-p@chr8:103075001..103075005
-
Hg19::chr8:116430595..116430636,-p@chr8:116430595..116430636
-
Hg19::chr8:116430640..116430666,-p@chr8:116430640..116430666
-
Hg19::chr8:116430671..116430681,-p@chr8:116430671..116430681
-
Hg19::chr8:117449322..117449337,-p@chr8:117449322..117449337
-
Hg19::chr8:120662908..120662932,-p@chr8:120662908..120662932
-
Hg19::chr8:126171283..126171303,+p@chr8:126171283..126171303
+
Hg19::chr8:126954724..126954729,+p@chr8:126954724..126954729
+
Hg19::chr8:126954801..126954817,+p@chr8:126954801..126954817
+
Hg19::chr8:126954902..126954910,+p@chr8:126954902..126954910
+
Hg19::chr8:126965896..126965903,+p@chr8:126965896..126965903
+
Hg19::chr8:13490803..13490806,+p@chr8:13490803..13490806
+
Hg19::chr8:142426120..142426125,+p@chr8:142426120..142426125
+
Hg19::chr8:142431453..142431493,+p@chr8:142431453..142431493
+
Hg19::chr8:17611643..17611691,-p13@MTUS1
Hg19::chr8:17611701..17611714,-p39@MTUS1
Hg19::chr8:71053850..71053871,-p22@NCOA2
Hg19::chr8:80659403..80659408,-p@chr8:80659403..80659408
-
Hg19::chr9:135730308..135730344,-p@chr9:135730308..135730344
-
Hg19::chr9:135730367..135730374,-p@chr9:135730367..135730374
-
Hg19::chr9:135730378..135730387,-p@chr9:135730378..135730387
-
Hg19::chr9:27485361..27485373,-p@chr9:27485361..27485373
-
Hg19::chr9:72110362..72110371,-p@chr9:72110362..72110371
-
Hg19::chr9:72110378..72110387,-p@chr9:72110378..72110387
-
Hg19::chr9:72110397..72110405,-p@chr9:72110397..72110405
-
Hg19::chr9:72110413..72110420,-p@chr9:72110413..72110420
-
Hg19::chr9:72110424..72110435,-p@chr9:72110424..72110435
-
Hg19::chr9:72110438..72110450,-p@chr9:72110438..72110450
-
Hg19::chr9:72110472..72110517,-p@chr9:72110472..72110517
-
Hg19::chrX:24315531..24315536,-p@chrX:24315531..24315536
-
Hg19::chrX:30250179..30250188,+p@chrX:30250179..30250188
+
Hg19::chrX:30250205..30250214,+p@chrX:30250205..30250214
+
Hg19::chrX:30265485..30265527,+p@chrX:30265485..30265527
+
Hg19::chrX:37322073..37322083,-p@chrX:37322073..37322083
-
Hg19::chrX:37343958..37343963,+p@chrX:37343958..37343963
+
Hg19::chrX:39714022..39714050,-p@chrX:39714022..39714050
-
Hg19::chrX:47967364..47967379,+p1@SSX6
Hg19::chrX:48114805..48114830,+p1@SSX1
Hg19::chrX:48138441..48138462,-p@chrX:48138441..48138462
-
Hg19::chrX:48166729..48166731,+p@chrX:48166729..48166731
+
Hg19::chrX:65423216..65423225,+p16@HEPH
Hg19::chrY:13470482..13470486,+p1@ENST00000557360
Hg19::chrY:22917989..22917999,+p2@RPS4Y2
Hg19::chrY:22918021..22918033,+p1@RPS4Y2
Hg19::chrY:22919344..22919347,+p@chrY:22919344..22919347
+
Hg19::chrY:6846049..6846056,+p@chrY:6846049..6846056
+
Hg19::chrY:6846089..6846096,+p@chrY:6846089..6846096
+


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

No GOStat results

Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br><br>disease_data<br>

Cell Type
Ontology termp-valuen
T cell2.15e-0925
pro-T cell2.15e-0925
Disease
Ontology termp-valuen
lymphoma3.81e-2110


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

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