FFCP PHASE1:Hg19::chr11:116692434..116692448,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=337 | |EntrezGene=337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=602 | |HGNC=602 | ||
|TSSclassifier=strong | |||
|UniProt=Q13784 | |UniProt=Q13784 | ||
|association_with_transcript=-63bp_to_M10373_5end | |association_with_transcript=-63bp_to_M10373_5end | ||
|cluster_id=chr11:116692434..116692448,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_3_at_APOA4_5end | |description=CAGE_peak_3_at_APOA4_5end | ||
|id=chr11:116692434..116692448,- | |id=chr11:116692434..116692448,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.23e-23!27;UBERON:0002146!3.91e-19!1;UBERON:0005623!3.91e-19!1;UBERON:0005409!5.82e-18!35;UBERON:0002108!1.37e-11!14;UBERON:0001155!5.20e-09!9;UBERON:0004921!1.99e-08!129;UBERON:0004185!1.99e-08!129;UBERON:0000059!1.56e-07!11;UBERON:0003978!2.97e-07!3;UBERON:0009751!2.97e-07!3;UBERON:0000946!2.97e-07!3;UBERON:0002523!2.97e-07!3;UBERON:0005983!2.97e-07!3;UBERON:0002165!2.97e-07!3;UBERON:0002062!2.97e-07!3;UBERON:0007280!2.97e-07!3;UBERON:0001007!6.34e-07!155;UBERON:0001555!6.34e-07!155;UBERON:0007026!6.34e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.65e-59;4!UBERON:0000160;9.18e-30;17!UBERON:0005409;1.84e-23;22!UBERON:0004921;1.15e-13;33!UBERON:0002114;2.89e-12;2!UBERON:0000922;7.50e-09;49!UBERON:0001555;1.07e-07;54!UBERON:0001007;7.94e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.65e-59,4;UBERON:0000160,9.18e-30,17;UBERON:0005409,7.73e-21,25;UBERON:0002114,3.24e-12,2;UBERON:0004921,2.32e-07,118 | |||
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|short_description=p3@APOA4 | |short_description=p3@APOA4 | ||
}} | }} |
Latest revision as of 19:15, 15 September 2015
Short description: | p3@APOA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_APOA4_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -63bp_to_M10373_5end |
EntrezGene: | APOA4 |
HGNC: | 602 |
UniProt: | Q13784 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 1.65e-59 | 4 |
intestine | 9.18e-30 | 17 |
gastrointestinal system | 7.73e-21 | 25 |
duodenum | 3.24e-12 | 2 |
subdivision of digestive tract | 2.32e-07 | 118 |