FFCP PHASE1:Hg19::chr11:61647647..61647669,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3995 | |EntrezGene=3995 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3576 | |HGNC=3576 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000534426_5end | |association_with_transcript=0bp_to_ENST00000534426_5end | ||
|cluster_id=chr11:61647647..61647669,- | |||
|coexpression_cluster_id=C183 | |||
|description=CAGE_peak_8_at_FADS3_5end | |description=CAGE_peak_8_at_FADS3_5end | ||
|id=chr11:61647647..61647669,- | |id=chr11:61647647..61647669,- | ||
|ontology_enrichment_celltype=CL:0000236!4.43e-26!14;CL:0000945!6.01e-26!24;CL:0000826!6.01e-26!24;CL:0000542!2.71e-12!53;CL:0000051!2.71e-12!53;CL:0000838!1.42e-10!52;CL:0000817!1.55e-07!3;CL:0002087!2.32e-07!119 | |ontology_enrichment_celltype=CL:0000236!4.43e-26!14;CL:0000945!6.01e-26!24;CL:0000826!6.01e-26!24;CL:0000542!2.71e-12!53;CL:0000051!2.71e-12!53;CL:0000838!1.42e-10!52;CL:0000817!1.55e-07!3;CL:0002087!2.32e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.11e-27;13!CL:0000817;1.07e-23;1!CL:0000785;1.67e-23;1!CL:0000819;1.67e-23;1!CL:0000945;4.90e-23;24!CL:0000542;7.30e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,1.26e-30,3;CL:0000236,1.74e-25,14;CL:0000819,1.67e-23,1;CL:0000945,4.79e-23,24;CL:0000826,4.79e-23,24;CL:0000542,5.47e-15,53;CL:0000051,5.47e-15,53;CL:0000785,1.85e-12,2;CL:0000955,1.85e-12,2;CL:0000818,1.85e-12,2;CL:0000954,1.85e-12,2;CL:0000816,1.85e-12,2;CL:0000838,9.15e-11,52;CL:0002087,8.01e-07,115 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.34e-23;1!CL:0000954;1.85e-12;2!UBERON:0006965;2.74e-12;2!CL:0000051;7.30e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;1.34e-23;1!DOID:0060073;1.67e-23;1!DOID:8675;1.67e-23;1!DOID:0060058;8.27e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.34e-23,1;DOID:0060073,1.67e-23,1;DOID:8675,1.67e-23,1;DOID:0060058,8.09e-10,10;DOID:2531,2.32e-07,51;DOID:0060083,2.32e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.02e-10!7;UBERON:0002106!8.56e-07!3;UBERON:0004854!8.56e-07!3;UBERON:0009034!8.56e-07!3;UBERON:0002095!8.56e-07!3;UBERON:0004782!8.56e-07!3;UBERON:0003281!8.56e-07!3;UBERON:0009664!8.56e-07!3;UBERON:0002296!8.56e-07!3;UBERON:0005602!8.56e-07!3;UBERON:0001179!8.56e-07!3;UBERON:0006293!8.56e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.34e-23;1!UBERON:0001154;2.34e-23;1!UBERON:0001153;2.34e-23;1!UBERON:0009854;2.34e-23;1!UBERON:0001961;2.34e-23;1!UBERON:0001744;2.34e-23;1!UBERON:0001042;2.34e-23;1!UBERON:0001735;2.34e-23;1!UBERON:0006562;2.19e-12;2!UBERON:0009856;7.91e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,2.10e-23,1;UBERON:0001153,2.10e-23,1;UBERON:0001045,2.10e-23,1;UBERON:0002372,2.62e-23,1;UBERON:0001961,2.62e-23,1;UBERON:0001744,2.62e-23,1;UBERON:0001735,2.62e-23,1 | |||
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| ||
|short_description=p8@FADS3 | |short_description=p8@FADS3 | ||
}} | }} |
Latest revision as of 17:23, 18 September 2015
Short description: | p8@FADS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FADS3_5end |
Coexpression cluster: | C183_acute_non_CD34_diffuse_CD133_myeloma_Burkitt |
Association with transcript: | 0bp_to_ENST00000534426_5end |
EntrezGene: | FADS3 |
HGNC: | 3576 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 1.26e-30 | 3 |
B cell | 1.74e-25 | 14 |
B-1 B cell | 1.67e-23 | 1 |
lymphocyte of B lineage | 4.79e-23 | 24 |
pro-B cell | 4.79e-23 | 24 |
lymphocyte | 5.47e-15 | 53 |
common lymphoid progenitor | 5.47e-15 | 53 |
mature B cell | 1.85e-12 | 2 |
pre-B-II cell | 1.85e-12 | 2 |
transitional stage B cell | 1.85e-12 | 2 |
small pre-B-II cell | 1.85e-12 | 2 |
immature B cell | 1.85e-12 | 2 |
lymphoid lineage restricted progenitor cell | 9.15e-11 | 52 |
nongranular leukocyte | 8.01e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 2.10e-23 | 1 |
caecum | 2.10e-23 | 1 |
midgut | 2.10e-23 | 1 |
tonsil | 2.62e-23 | 1 |
mucosa-associated lymphoid tissue | 2.62e-23 | 1 |
lymphoid tissue | 2.62e-23 | 1 |
tonsillar ring | 2.62e-23 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.34e-23 | 1 |
lymphatic system cancer | 1.67e-23 | 1 |
lymphosarcoma | 1.67e-23 | 1 |
lymphoma | 8.09e-10 | 10 |
hematologic cancer | 2.32e-07 | 51 |
immune system cancer | 2.32e-07 | 51 |