FFCP PHASE1:Hg19::chr12:121418749..121418758,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:121418749..121418758,-
|short_description=p6@HNF1A-AS1
|description=CAGE_peak_6_at_HNF1A-AS1_5end
|association_with_transcript=9bp_to_ENST00000535301_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=26785 | |HGNC=26785 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_ENST00000535301_5end | |||
|cluster_id=chr12:121418749..121418758,- | |||
|description=CAGE_peak_6_at_HNF1A-AS1_5end | |||
|id=chr12:121418749..121418758,- | |||
|ontology_enrichment_celltype=CL:0000181!1.24e-17!12;CL:0000417!1.24e-17!12;CL:0000668!1.24e-17!12;CL:0000414!1.24e-17!12;CL:0000412!1.24e-17!12;CL:0000182!1.24e-17!12;CL:0000223!5.37e-10!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.23e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.31e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.71e-19;1!UBERON:0004161;1.80e-15;11!UBERON:0003104;1.07e-14;31!UBERON:0009497;3.41e-13;13!UBERON:0003918;3.08e-08;10!UBERON:0007687;3.08e-08;10 | |||
|ontology_enrichment_disease=DOID:299!4.08e-10!25;DOID:305!1.96e-09!106;DOID:0050687!6.46e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!1.90e-21!23;UBERON:0009497!1.14e-19!25;UBERON:0000015!1.14e-19!25;UBERON:0002423!1.14e-19!25;UBERON:0006235!1.14e-19!25;UBERON:0004161!1.14e-19!25;UBERON:0009856!1.03e-18!26;UBERON:0008835!1.48e-18!22;UBERON:0003894!1.48e-18!22;UBERON:0005409!1.62e-18!35;UBERON:0002107!9.80e-18!19;UBERON:0006925!9.80e-18!19;UBERON:0008836!9.80e-18!19;UBERON:0004921!2.78e-17!129;UBERON:0004185!2.78e-17!129;UBERON:0007499!4.24e-16!25;UBERON:0005057!2.38e-15!26;UBERON:0005172!4.22e-15!55;UBERON:0005173!4.22e-15!55;UBERON:0001007!9.03e-15!155;UBERON:0001555!9.03e-15!155;UBERON:0007026!9.03e-15!155;UBERON:0000160!1.39e-14!27;UBERON:0002417!2.75e-13!61;UBERON:0000916!2.75e-13!61;UBERON:0003929!4.13e-13!54;UBERON:0004119!4.76e-13!169;UBERON:0000925!4.76e-13!169;UBERON:0006595!4.76e-13!169;UBERON:0000077!1.70e-11!130;UBERON:0005177!8.55e-11!107;UBERON:0000059!2.26e-10!11;UBERON:0002365!2.97e-10!31;UBERON:0002330!2.97e-10!31;UBERON:0005911!3.07e-10!82;UBERON:0000949!4.83e-10!45;UBERON:0001041!2.85e-09!98;UBERON:0002368!6.67e-09!35;UBERON:0004907!1.00e-08!5;UBERON:0001155!2.55e-08!9;UBERON:0009569!1.24e-07!113;UBERON:0000466!2.05e-07!126;UBERON:0003104!8.10e-07!238;UBERON:0009142!8.10e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;6.29e-12;25!UBERON:0002107;3.19e-09;19!UBERON:0006925;3.19e-09;19!UBERON:0005172;1.16e-08;52!UBERON:0005173;1.16e-08;52!UBERON:0002417;4.12e-08;58!UBERON:0000916;4.12e-08;58!UBERON:0000059;1.72e-07;11!UBERON:0002110;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,6.44e-12,54;UBERON:0005173,6.44e-12,54;UBERON:0009497,6.76e-12,25;UBERON:0000015,6.76e-12,25;UBERON:0002423,6.76e-12,25;UBERON:0006235,6.76e-12,25;UBERON:0004161,6.76e-12,25;UBERON:0002417,1.04e-10,60;UBERON:0000916,1.04e-10,60;UBERON:0002107,3.15e-09,19;UBERON:0006925,3.15e-09,19;UBERON:0008836,3.15e-09,19;UBERON:0005177,1.92e-08,101;UBERON:0008835,4.78e-08,22;UBERON:0003894,4.78e-08,22;UBERON:0009854,1.01e-07,23;UBERON:0000059,1.37e-07,11;UBERON:0002110,3.16e-07,3;UBERON:0006242,3.16e-07,3;UBERON:0007499,3.80e-07,25;UBERON:0009856,6.83e-07,26;UBERON:0000949,9.06e-07,45 | |||
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| ||
|short_description=p6@HNF1A-AS1 | |||
}} | }} |
Latest revision as of 21:09, 16 September 2015
Short description: | p6@HNF1A-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HNF1A-AS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000535301_5end |
EntrezGene: | NA |
HGNC: | 26785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.31e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 6.44e-12 | 54 |
abdominal segment element | 6.44e-12 | 54 |
epithelium of foregut-midgut junction | 6.76e-12 | 25 |
anatomical boundary | 6.76e-12 | 25 |
hepatobiliary system | 6.76e-12 | 25 |
foregut-midgut junction | 6.76e-12 | 25 |
septum transversum | 6.76e-12 | 25 |
abdominal segment of trunk | 1.04e-10 | 60 |
abdomen | 1.04e-10 | 60 |
liver | 3.15e-09 | 19 |
digestive gland | 3.15e-09 | 19 |
liver bud | 3.15e-09 | 19 |
trunk region element | 1.92e-08 | 101 |
hepatic diverticulum | 4.78e-08 | 22 |
liver primordium | 4.78e-08 | 22 |
digestive tract diverticulum | 1.01e-07 | 23 |
large intestine | 1.37e-07 | 11 |
gallbladder | 3.16e-07 | 3 |
gall bladder primordium | 3.16e-07 | 3 |
epithelial sac | 3.80e-07 | 25 |
sac | 6.83e-07 | 26 |
endocrine system | 9.06e-07 | 45 |