FFCP PHASE1:Hg19::chr12:52908498..52908505,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C207|description=CAGE_peak_at_chr12:52908498..52908505,-|id=chr12:52908498..52908505,-|ontology_enrichment_celltype=CL:0002076!5.91e-33!43;CL:0000223!1.98e-22!59;CL:0002368!1.01e-19!13;CL:0002251!1.64e-17!21;CL:0000066!1.77e-14!254;CL:0000622!3.67e-12!5;CL:0002623!6.62e-12!3;CL:0000068!5.69e-11!3;CL:0000069!5.69e-11!3;CL:0000307!5.69e-11!3;CL:0000377!5.69e-11!3;CL:0000076!3.63e-10!62;CL:0000154!3.96e-10!6;CL:0002159!1.82e-09!13;CL:0002202!2.34e-09!9;CL:0002632!2.34e-09!9;CL:0000575!2.17e-08!2;CL:0000244!3.30e-08!4;CL:0000731!3.30e-08!4;CL:0002327!4.77e-08!4;CL:0000150!9.93e-07!9|ontology_enrichment_celltype_v019=CL:0000622;1.92e-25;5!CL:0002623;1.40e-24;3!CL:0002076;4.25e-24;42!CL:0000154;3.00e-21;6!CL:0000575;1.66e-16;2!CL:0002368;1.44e-14;13!CL:0000150;3.06e-14;9!CL:0002159;7.64e-14;14!CL:0002251;1.06e-13;20!CL:0000240;1.06e-12;6!CL:0000311;1.06e-12;6!CL:0000079;1.06e-12;6!CL:0000237;1.06e-12;6!CL:0002231;4.65e-11;3!CL:0000307;4.65e-11;3!CL:0002336;1.60e-09;1!CL:0002261;1.60e-09;1!CL:0002170;1.60e-09;1!CL:0002252;6.46e-09;1!CL:0000362;1.97e-08;9!CL:0002202;3.96e-08;9!CL:0002632;3.96e-08;9!CL:0000312;2.38e-07;5|ontology_enrichment_celltype_v019_2=CL:0002076,1.86e-28,42;CL:0000622,1.37e-25,5;CL:0002623,1.52e-24,3;CL:0000154,2.26e-21,6;CL:0000223,5.65e-20,58;CL:0000575,1.00e-16,2;CL:0002368,2.36e-14,13;CL:0000150,2.54e-14,9;CL:0002159,4.96e-14,14;CL:0002251,1.04e-13,20;CL:0000240,9.46e-13,6;CL:0000311,9.46e-13,6;CL:0000079,9.46e-13,6;CL:0000237,9.46e-13,6;CL:0000036,9.46e-13,6;CL:0000357,9.46e-13,6;CL:0000114,9.46e-13,6;CL:0002231,5.16e-11,3;CL:0000068,6.65e-11,3;CL:0000069,6.65e-11,3;CL:0000307,6.65e-11,3;CL:0000377,6.65e-11,3;CL:0000066,1.03e-09,253;CL:0002336,1.60e-09,1;CL:0002261,1.60e-09,1;CL:0002170,1.60e-09,1;CL:0002252,5.75e-09,1;CL:0000362,1.55e-08,9;CL:0002202,5.27e-08,9;CL:0002632,5.27e-08,9;CL:0002321,1.37e-07,250;CL:0000312,2.17e-07,5;CL:0000076,6.90e-07,63|ontology_enrichment_development_v019=CL:0000357;1.06e-12;6!CL:0000114;1.06e-12;6!CL:0000377;4.65e-11;3!CL:0000223;2.57e-10;58|ontology_enrichment_disease=DOID:1749!6.24e-17!14|ontology_enrichment_disease_v019=DOID:3151;2.60e-09;1!DOID:3149;2.60e-09;1|ontology_enrichment_disease_v019_2=DOID:3151,2.82e-09,1;DOID:3149,2.82e-09,1|ontology_enrichment_uberon=UBERON:0001004!6.72e-17!72;UBERON:0000166!2.14e-14!21;UBERON:0000165!1.17e-12!28;UBERON:0000930!1.17e-12!28;UBERON:0004119!3.08e-12!169;UBERON:0000925!3.08e-12!169;UBERON:0006595!3.08e-12!169;UBERON:0000161!1.56e-11!35;UBERON:0003729!4.34e-11!5;UBERON:0003102!8.41e-10!95;UBERON:0001444!2.56e-09!48;UBERON:0000065!4.53e-09!53;UBERON:0003408!2.16e-08!10;UBERON:0007196!4.65e-08!14;UBERON:0001558!4.65e-08!14;UBERON:0001911!4.77e-08!4;UBERON:0005333!4.77e-08!4;UBERON:0008425!4.77e-08!4;UBERON:0005311!4.77e-08!4;UBERON:0003343!6.72e-08!4;UBERON:0004785!6.72e-08!4;UBERON:0003126!8.94e-08!7;UBERON:0001005!8.94e-08!7;UBERON:0000974!1.06e-07!10|ontology_enrichment_uberon_v019=UBERON:0001044;1.40e-12;6!UBERON:0003293;1.40e-12;6!UBERON:0003294;1.40e-12;6!UBERON:0010047;1.40e-12;6!UBERON:0003408;1.40e-12;6!UBERON:0000167;1.40e-12;6!UBERON:0000165;1.21e-09;28!UBERON:0005795;2.60e-09;1!UBERON:0001041;3.29e-09;14!UBERON:0007029;6.46e-09;1!UBERON:0000014;1.05e-08;4!UBERON:0000964;1.05e-08;4!UBERON:0010409;1.05e-08;4!UBERON:0001003;1.64e-08;15!UBERON:0007376;1.64e-08;15!UBERON:0007811;3.97e-07;52!UBERON:0000161;8.21e-07;19!UBERON:0000166;8.21e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.30e-15,99;UBERON:0001044,1.45e-12,6;UBERON:0003293,1.45e-12,6;UBERON:0003294,1.45e-12,6;UBERON:0010047,1.45e-12,6;UBERON:0000167,1.45e-12,6;UBERON:0000161,8.76e-10,36;UBERON:0000165,2.45e-09,29;UBERON:0000930,2.45e-09,29;UBERON:0004119,3.25e-09,160;UBERON:0000925,3.25e-09,160;UBERON:0006595,3.25e-09,160;UBERON:0001444,3.25e-09,49;UBERON:0007029,4.91e-09,1;UBERON:0000964,8.19e-09,4;UBERON:0010409,8.19e-09,4;UBERON:0004348,8.19e-09,4;UBERON:0005427,8.19e-09,4;UBERON:0000166,8.72e-09,22;UBERON:0001004,9.27e-09,74;UBERON:0000014,9.56e-09,4;UBERON:0001003,1.26e-08,15;UBERON:0007376,1.26e-08,15;UBERON:0007383,1.26e-08,15;UBERON:0000033,6.34e-08,56;UBERON:0003408,9.97e-08,10;UBERON:0000153,4.73e-07,62;UBERON:0007811,4.73e-07,62|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.860413786167011,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_at_chr12:52908498..52908505,- | |||
|id=chr12:52908498..52908505,- | |||
|ontology_enrichment_celltype=CL:0002076!5.91e-33!43;CL:0000223!1.98e-22!59;CL:0002368!1.01e-19!13;CL:0002251!1.64e-17!21;CL:0000066!1.77e-14!254;CL:0000622!3.67e-12!5;CL:0002623!6.62e-12!3;CL:0000068!5.69e-11!3;CL:0000069!5.69e-11!3;CL:0000307!5.69e-11!3;CL:0000377!5.69e-11!3;CL:0000076!3.63e-10!62;CL:0000154!3.96e-10!6;CL:0002159!1.82e-09!13;CL:0002202!2.34e-09!9;CL:0002632!2.34e-09!9;CL:0000575!2.17e-08!2;CL:0000244!3.30e-08!4;CL:0000731!3.30e-08!4;CL:0002327!4.77e-08!4;CL:0000150!9.93e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000622;1.92e-25;5!CL:0002623;1.40e-24;3!CL:0002076;4.25e-24;42!CL:0000154;3.00e-21;6!CL:0000575;1.66e-16;2!CL:0002368;1.44e-14;13!CL:0000150;3.06e-14;9!CL:0002159;7.64e-14;14!CL:0002251;1.06e-13;20!CL:0000240;1.06e-12;6!CL:0000311;1.06e-12;6!CL:0000079;1.06e-12;6!CL:0000237;1.06e-12;6!CL:0002231;4.65e-11;3!CL:0000307;4.65e-11;3!CL:0002336;1.60e-09;1!CL:0002261;1.60e-09;1!CL:0002170;1.60e-09;1!CL:0002252;6.46e-09;1!CL:0000362;1.97e-08;9!CL:0002202;3.96e-08;9!CL:0002632;3.96e-08;9!CL:0000312;2.38e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.86e-28,42;CL:0000622,1.37e-25,5;CL:0002623,1.52e-24,3;CL:0000154,2.26e-21,6;CL:0000223,5.65e-20,58;CL:0000575,1.00e-16,2;CL:0002368,2.36e-14,13;CL:0000150,2.54e-14,9;CL:0002159,4.96e-14,14;CL:0002251,1.04e-13,20;CL:0000240,9.46e-13,6;CL:0000311,9.46e-13,6;CL:0000079,9.46e-13,6;CL:0000237,9.46e-13,6;CL:0000036,9.46e-13,6;CL:0000357,9.46e-13,6;CL:0000114,9.46e-13,6;CL:0002231,5.16e-11,3;CL:0000068,6.65e-11,3;CL:0000069,6.65e-11,3;CL:0000307,6.65e-11,3;CL:0000377,6.65e-11,3;CL:0000066,1.03e-09,253;CL:0002336,1.60e-09,1;CL:0002261,1.60e-09,1;CL:0002170,1.60e-09,1;CL:0002252,5.75e-09,1;CL:0000362,1.55e-08,9;CL:0002202,5.27e-08,9;CL:0002632,5.27e-08,9;CL:0002321,1.37e-07,250;CL:0000312,2.17e-07,5;CL:0000076,6.90e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000357;1.06e-12;6!CL:0000114;1.06e-12;6!CL:0000377;4.65e-11;3!CL:0000223;2.57e-10;58 | |||
|ontology_enrichment_disease=DOID:1749!6.24e-17!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.60e-09;1!DOID:3149;2.60e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.82e-09,1;DOID:3149,2.82e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!6.72e-17!72;UBERON:0000166!2.14e-14!21;UBERON:0000165!1.17e-12!28;UBERON:0000930!1.17e-12!28;UBERON:0004119!3.08e-12!169;UBERON:0000925!3.08e-12!169;UBERON:0006595!3.08e-12!169;UBERON:0000161!1.56e-11!35;UBERON:0003729!4.34e-11!5;UBERON:0003102!8.41e-10!95;UBERON:0001444!2.56e-09!48;UBERON:0000065!4.53e-09!53;UBERON:0003408!2.16e-08!10;UBERON:0007196!4.65e-08!14;UBERON:0001558!4.65e-08!14;UBERON:0001911!4.77e-08!4;UBERON:0005333!4.77e-08!4;UBERON:0008425!4.77e-08!4;UBERON:0005311!4.77e-08!4;UBERON:0003343!6.72e-08!4;UBERON:0004785!6.72e-08!4;UBERON:0003126!8.94e-08!7;UBERON:0001005!8.94e-08!7;UBERON:0000974!1.06e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.40e-12;6!UBERON:0003293;1.40e-12;6!UBERON:0003294;1.40e-12;6!UBERON:0010047;1.40e-12;6!UBERON:0003408;1.40e-12;6!UBERON:0000167;1.40e-12;6!UBERON:0000165;1.21e-09;28!UBERON:0005795;2.60e-09;1!UBERON:0001041;3.29e-09;14!UBERON:0007029;6.46e-09;1!UBERON:0000014;1.05e-08;4!UBERON:0000964;1.05e-08;4!UBERON:0010409;1.05e-08;4!UBERON:0001003;1.64e-08;15!UBERON:0007376;1.64e-08;15!UBERON:0007811;3.97e-07;52!UBERON:0000161;8.21e-07;19!UBERON:0000166;8.21e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.30e-15,99;UBERON:0001044,1.45e-12,6;UBERON:0003293,1.45e-12,6;UBERON:0003294,1.45e-12,6;UBERON:0010047,1.45e-12,6;UBERON:0000167,1.45e-12,6;UBERON:0000161,8.76e-10,36;UBERON:0000165,2.45e-09,29;UBERON:0000930,2.45e-09,29;UBERON:0004119,3.25e-09,160;UBERON:0000925,3.25e-09,160;UBERON:0006595,3.25e-09,160;UBERON:0001444,3.25e-09,49;UBERON:0007029,4.91e-09,1;UBERON:0000964,8.19e-09,4;UBERON:0010409,8.19e-09,4;UBERON:0004348,8.19e-09,4;UBERON:0005427,8.19e-09,4;UBERON:0000166,8.72e-09,22;UBERON:0001004,9.27e-09,74;UBERON:0000014,9.56e-09,4;UBERON:0001003,1.26e-08,15;UBERON:0007376,1.26e-08,15;UBERON:0007383,1.26e-08,15;UBERON:0000033,6.34e-08,56;UBERON:0003408,9.97e-08,10;UBERON:0000153,4.73e-07,62;UBERON:0007811,4.73e-07,62 | |||
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|short_description=p@chr12:52908498..52908505,- | |||
}} |
Revision as of 23:09, 10 September 2013
Short description: | p@chr12:52908498..52908505, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:52908498..52908505, - |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface structure | 5.30e-15 | 99 |
saliva-secreting gland | 1.45e-12 | 6 |
gland of oral region | 1.45e-12 | 6 |
gland of foregut | 1.45e-12 | 6 |
oral gland | 1.45e-12 | 6 |
oral cavity | 1.45e-12 | 6 |
orifice | 8.76e-10 | 36 |
mouth | 2.45e-09 | 29 |
stomodeum | 2.45e-09 | 29 |
endoderm-derived structure | 3.25e-09 | 160 |
endoderm | 3.25e-09 | 160 |
presumptive endoderm | 3.25e-09 | 160 |
subdivision of head | 3.25e-09 | 49 |
surface | 4.91e-09 | 1 |
cornea | 8.19e-09 | 4 |
eye surface | 8.19e-09 | 4 |
optic eminence | 8.19e-09 | 4 |
corneal primordium | 8.19e-09 | 4 |
oral opening | 8.72e-09 | 22 |
respiratory system | 9.27e-09 | 74 |
zone of skin | 9.56e-09 | 4 |
skin epidermis | 1.26e-08 | 15 |
outer epithelium | 1.26e-08 | 15 |
enveloping layer of ectoderm | 1.26e-08 | 15 |
head | 6.34e-08 | 56 |
gland of gut | 9.97e-08 | 10 |
anterior region of body | 4.73e-07 | 62 |
craniocervical region | 4.73e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.82e-09 | 1 |
keratoacanthoma | 2.82e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.