FFCP PHASE1:Hg19::chr12:68809739..68809749,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:68809739..68809749,- | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_at_chr12:68809739..68809749,- | |description=CAGE_peak_at_chr12:68809739..68809749,- | ||
|id=chr12:68809739..68809749,- | |id=chr12:68809739..68809749,- | ||
|ontology_enrichment_celltype=CL:0000838!3.40e-18!52;CL:0000542!8.98e-18!53;CL:0000051!8.98e-18!53;CL:0002087!1.11e-14!119;CL:0000623!8.46e-13!3;CL:0000825!8.46e-13!3;CL:0000875!2.55e-12!3;CL:0002396!2.55e-12!3;CL:0000738!1.34e-11!140;CL:0002031!3.16e-11!124;CL:0000945!1.22e-09!24;CL:0000826!1.22e-09!24;CL:0000037!2.78e-09!172;CL:0000566!2.78e-09!172;CL:0000988!1.88e-08!182;CL:0002032!5.38e-08!165;CL:0000837!5.38e-08!165 | |ontology_enrichment_celltype=CL:0000838!3.40e-18!52;CL:0000542!8.98e-18!53;CL:0000051!8.98e-18!53;CL:0002087!1.11e-14!119;CL:0000623!8.46e-13!3;CL:0000825!8.46e-13!3;CL:0000875!2.55e-12!3;CL:0002396!2.55e-12!3;CL:0000738!1.34e-11!140;CL:0002031!3.16e-11!124;CL:0000945!1.22e-09!24;CL:0000826!1.22e-09!24;CL:0000037!2.78e-09!172;CL:0000566!2.78e-09!172;CL:0000988!1.88e-08!182;CL:0002032!5.38e-08!165;CL:0000837!5.38e-08!165 | ||
|ontology_enrichment_celltype_v019=CL:0000945;4.20e-12;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.20e-12,24;CL:0000826,4.20e-12,24 | |||
|ontology_enrichment_development_v019=UBERON:0004872;8.16e-11;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.22e-27;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.08e-27,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.62e-23;3!UBERON:0004177;1.40e-14;5!UBERON:0005057;1.40e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.62e-23,3;UBERON:0004854,2.62e-23,3;UBERON:0009034,2.62e-23,3;UBERON:0002095,2.62e-23,3;UBERON:0004782,2.62e-23,3;UBERON:0003281,2.62e-23,3;UBERON:0009664,2.62e-23,3;UBERON:0002296,2.62e-23,3;UBERON:0005602,2.62e-23,3;UBERON:0001179,2.62e-23,3;UBERON:0006293,2.62e-23,3;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0000945,1.24e-09,8;UBERON:0010039,1.24e-09,8;UBERON:0004457,7.48e-07,12;UBERON:0000042,7.48e-07,12;UBERON:0003887,7.48e-07,12 | |||
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| ||
|short_description=p@chr12:68809739..68809749,- | |short_description=p@chr12:68809739..68809749,- | ||
}} | }} |
Latest revision as of 11:43, 24 July 2015
Short description: | p@chr12:68809739..68809749, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:68809739..68809749, - |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.20e-12 | 24 |
pro-B cell | 4.20e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.62e-23 | 3 |
gastrointestinal system mesentery | 2.62e-23 | 3 |
stomach region | 2.62e-23 | 3 |
mesentery | 2.62e-23 | 3 |
gastrointestinal system serosa | 2.62e-23 | 3 |
mesentery of stomach | 2.62e-23 | 3 |
gut mesentery | 2.62e-23 | 3 |
dorsal mesentery | 2.62e-23 | 3 |
dorsal mesogastrium | 2.62e-23 | 3 |
peritoneal cavity | 2.62e-23 | 3 |
spleen primordium | 2.62e-23 | 3 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
stomach | 1.24e-09 | 8 |
food storage organ | 1.24e-09 | 8 |
cavity lining | 7.48e-07 | 12 |
serous membrane | 7.48e-07 | 12 |
intraembryonic coelom | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.08e-27 | 10 |