FFCP PHASE1:Hg19::chr15:52044409..52044431,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr15:52044409..52044431,- to FFCP PHASE1:Hg19::chr15:52044409..52044431,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:52044409..52044431,- | |||
|description=CAGE_peak_at_chr15:52044409..52044431,- | |||
|id=chr15:52044409..52044431,- | |||
|ontology_enrichment_celltype=CL:0000066!5.04e-10!254;CL:0002368!1.87e-09!13;CL:0002202!7.34e-08!9;CL:0002632!7.34e-08!9;CL:0002076!4.72e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002202;3.70e-12;9!CL:0002632;3.70e-12;9!CL:0002368;8.05e-11;13!CL:0002328;1.50e-09;3!CL:0000737;4.58e-07;4!CL:0002535;5.84e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,2.90e-12,9;CL:0002632,2.90e-12,9;CL:0002368,6.97e-11,13;CL:0002328,1.02e-09,3;CL:0000066,3.21e-09,253;CL:0000737,4.35e-07,4;CL:0002535,6.40e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.06e-15!235;DOID:14566!1.16e-15!239;DOID:0050687!3.04e-13!143;DOID:305!9.59e-12!106;DOID:0050686!9.09e-09!137;DOID:1749!4.86e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.37e-13;14!DOID:1036;1.32e-09;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.68e-13,14;DOID:0050687,1.19e-11,143;DOID:305,1.32e-11,106;DOID:162,7.22e-11,235;DOID:14566,1.92e-10,239;DOID:1036,1.03e-09,8 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.50e-09;3!UBERON:0002031;1.50e-09;3!UBERON:0007196;5.44e-07;15!UBERON:0001558;5.44e-07;15!UBERON:0006955;5.84e-07;2!UBERON:0004801;5.84e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.02e-09,3;UBERON:0002031,1.02e-09,3;UBERON:0007196,4.74e-07,15;UBERON:0001558,4.74e-07,15;UBERON:0006955,6.40e-07,2;UBERON:0004801,6.40e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,5.58240934377942,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0.0764134057479513,0,0.0787107813136792,0,0,0.309632246632152,2.75826367343678,1.8072355126695,2.21852406100073,0,0.995184627411951,0.880801318004542,0.553995408531877,1.00272223735071,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0.641858054152187,0,0,0,0,0,0,0.622822248995575,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0.209658645508376,0,0.600707571366025,0,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0,0,0,0,0,0,0.0945348171640679,0,0.527008714158756,0.0654895377488563,0,1.11235332835329,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0.709336764396714,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0,0,0.23486899728753,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0.567160915800105,0.179389635688862,0,0,0.600182192168805,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,1.00973509697646,0,0,0,0,0,0,0,0.286804595389004,0.121973706129595,0.265059536642971,0.232387885739037,0,0.252320850875628,0.72995471815166,0,0,1.38134921352481,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0.603173834469785,0.0925884451585296,0,0,0,0,0,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0,0.234004265139238,0,0,0.671928512795438,0,0.626909658919938,2.61570544662566,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0,0,2.535908257668,0,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0.215714200818617,0,0.303127571446259,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0.616838775210622,0.532685175939381,0.246381468041427,0,1.16210378459959,0,0.200506470303285,0.0920809889358963,0,0.182091168006717,0,0,0.231046011313244,1.56869953835371,0,0.211103257785751,0,0,0.431831832204279,1.54227252690289,0,0,0.254876273045038,0.831076008928724,0.671624264166535,0,0,0.512900250232778,0,0,0,0,0,0.574265537996172,1.30012049207304,0,0,0.616194468458578,0.307007349452259,0.551346289938122,0,0,0.170453254832202,0.0890320356467374,0.330569830721956,0.384380134730212,1.27612712494584,0.30347334256665,0,0,0,0,0,0.869932992075073,0,0.286249773483982,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0.860468113224309,0,0,0,0,0,0,0,0.673554789078584,11.3951386841084,18.5114674264248,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0.490080431962063,0,2.74111504655245,0,0.637705090915289,0.199579371432817,0,0,0,0,0.228234679033192,0.783399478865116,0,0,0.321176150207399,0.201799707191048,0.425846237690326,7.55711758462682,0,0,0,1.17232857241224,0,0,0.270455678475983,0,0,0,0,0,0,3.12549761487054,0,0.296964680832639,0,0,0,0,0,3.80025734630388,0,0,3.52705846995986,0.102268682502155,0.123084805461069,0,1.16828856491525,0,0,0,0,0,0,0.278304294485554,0,4.42727193844896,0,0,6.82760689712998,0.762760950878299,0.236387681767936,6.55012409158783,0,2.77799991893268,0,0,0,0,1.18219047581419,0,0.21787692703798,0,0.230850775511391,0.113942055847001,0.69169171316418,0.718061155278177,0,0,0,0,11.241262801531,0,0,1.57916962432026,1.76456280885966,3.02078856556517,9.67744036893344,0.317873157960757,0.210998064528027,0.163232808159148,0.989471500037586,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0.91227394607833,0.782658475728359,0.728341138602278,0,0,0,0,3.00646838828985,0.103688191397247,0.664653872707185,0.330991955875499,0.313932918407225,2.38944859545918,0,0,0.173559738335131,0.195984794828755,1.21882889212564,0,0.171986032471617,0,0,0,0,0,0,0,0.397429223405979,0,0,0.320635281006135,0,0.999048047910651,0.864542502924636,0.458146384663663,1.71594997861965,0.432164393964449,1.61528296235062,5.1852687615695,2.17446729717782,2.196659772559,0.101998217636322,0,0,0.136905378891993,0,0.429765441419957,0.525774708558629,0,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0.0846733320657845,0,0.136203406111576,0.160753148465019,0.412618309791701,0.415440338029185,0.674921674654501,0,0,0.335434687599266,0.0788057072991982,0,0.105600336519406,0,1.91915197319445,0,0,0,0,0,0,3.59190574687462,0.082092520749339,0.511164065356265,0.226624183040251,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0.414239055347196,0.496166021811951,0.592834895693833,0,3.19170628885091,0,0,0,0,0.471162288750703,0,0.122026264901963,0,0,0,0.0620964029413835,0.276697269872462,0.749882447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| ||
|short_description=p@chr15:52044409..52044431,- | |||
}} | }} |
Latest revision as of 02:27, 25 July 2015
Short description: | p@chr15:52044409..52044431, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:52044409..52044431, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 2.90e-12 | 9 |
epithelial cell of lower respiratory tract | 2.90e-12 | 9 |
respiratory epithelial cell | 6.97e-11 | 13 |
bronchial epithelial cell | 1.02e-09 | 3 |
epithelial cell | 3.21e-09 | 253 |
striated muscle cell | 4.35e-07 | 4 |
epithelial cell of cervix | 6.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.02e-09 | 3 |
epithelium of bronchus | 1.02e-09 | 3 |
tracheobronchial tree | 4.74e-07 | 15 |
lower respiratory tract | 4.74e-07 | 15 |
uterine epithelium | 6.40e-07 | 2 |
cervix epithelium | 6.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.68e-13 | 14 |
cell type cancer | 1.19e-11 | 143 |
carcinoma | 1.32e-11 | 106 |
cancer | 7.22e-11 | 235 |
disease of cellular proliferation | 1.92e-10 | 239 |
chronic leukemia | 1.03e-09 | 8 |