FFCP PHASE1:Hg19::chr15:68521996..68522085,-: Difference between revisions
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{{FFCP | 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9208493677,19.779192296258,23.3493346148114,34.5126015381187,43.380246737907,16.79752187001,10.5267445243721,65.3034140521128,29.2210790563039,44.9129389734733,28.187349585336,40.6701536365175,157.06553006233,44.520465915992,50.2450406954455,13.6290932004143,36.8844772210206,36.1923171439174,22.1203091780509,21.5113679410139,30.5296561884859,31.6141731656475,22.0161266099283,17.8703357464359,23.8858916961526,46.8214080098942,22.3710863595585,108.652308612074,64.1288285406737,13.5960055809458,20.2245729506807,20.8766597640876,15.0570407848333,59.6545631828369,51.329299991633,41.622031772149,62.6850755316228,89.8214021810156,44.835964539302,23.3837699067072,45.4603885848231,52.6755371924906,12.7477127312031,16.4973582971138,9.81542335574726,13.664134415046,11.8343603723352,24.6394316297335,34.4920978986063,30.3596652355548,32.4808756756019,15.3556387200866,22.93816666152,43.9722689456642,35.0561466358328,19.2666299029907,11.4671666521161,55.8511330163874,25.2928343510203,9.16336449714793,24.3352346637084,16.3677807993371,7.85698568673411,16.439809360704,76.2045206003877,49.4973040995541,47.3852393782774,68.0265494379018,33.4021756581951,40.4337557953318,47.8851400048436,26.0678721870744,19.0254532410887,14.0958804707992,13.6531554537702,17.4851865158804,20.2354766744179,31.390210180299,24.6436615754556,40.9281298419239,15.7844952529849,19.2011329510308,22.642541781284,12.6626321401554,27.8837499480392,25.7482717359708,17.6309988969387,77.4145084490368,39.9160273582656,15.4457825829552,30.3609183120264,14.0784565442073,17.358285073967,18.3103280242082,6.65756774185513,19.1210103911475,53.5349382146399|short_description=p1@CLN6}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=54982 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2077 | |||
|TSSclassifier=S | |||
|UniProt=Q9NWW5,E7ESV1 | |||
|association_with_transcript=0bp_to_ENST00000249806,ENST00000418702,NM_017882,uc002arf.2,uc010ujy.1_5end | |||
|description=CAGE_peak_1_at_CLN6_5end | |||
|id=chr15:68521996..68522085,- | |||
|ontology_enrichment_celltype=CL:0000066!1.23e-20!254;CL:0000548!9.06e-13!679;CL:0000004!9.06e-13!679;CL:0000255!9.06e-13!679;CL:0000012!1.12e-12!682;CL:0002321!4.12e-08!248;CL:0000220!9.04e-08!246;CL:0000333!1.17e-07!41;CL:0000115!1.45e-07!35;CL:0002078!3.10e-07!44;CL:0000063!4.30e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000115;5.74e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.13e-21,253;CL:0002321,3.14e-08,250;CL:0000115,6.52e-08,36;CL:0000333,1.17e-07,41;CL:0002078,1.47e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.82e-31!235;DOID:14566!4.34e-31!239;DOID:0050687!3.27e-17!143;DOID:0050686!4.47e-16!137;DOID:2531!5.97e-15!51;DOID:0060083!5.97e-15!51;DOID:305!2.52e-13!106;DOID:1240!3.39e-13!39;DOID:8692!2.72e-12!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.91e-12;31!DOID:1240;2.09e-10;39!DOID:2531;2.82e-09;51!DOID:0060083;2.82e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.82e-31,235;DOID:14566,4.34e-31,239;DOID:0050687,3.27e-17,143;DOID:0050686,4.47e-16,137;DOID:2531,5.97e-15,51;DOID:0060083,5.97e-15,51;DOID:305,2.52e-13,106;DOID:1240,3.39e-13,39;DOID:8692,2.72e-12,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,9.59e-07,101 | |||
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| |||
|short_description=p1@CLN6 | |||
}} |
Revision as of 07:59, 11 September 2013
Short description: | p1@CLN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CLN6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000249806, ENST00000418702, NM_017882, uc002arf.2, uc010ujy.1_5end |
EntrezGene: | CLN6 |
HGNC: | 2077 |
UniProt: | Q9NWW5E7ESV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.13e-21 | 253 |
embryonic cell | 3.14e-08 | 250 |
endothelial cell | 6.52e-08 | 36 |
migratory neural crest cell | 1.17e-07 | 41 |
meso-epithelial cell | 1.47e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 9.59e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.82e-31 | 235 |
disease of cellular proliferation | 4.34e-31 | 239 |
cell type cancer | 3.27e-17 | 143 |
organ system cancer | 4.47e-16 | 137 |
hematologic cancer | 5.97e-15 | 51 |
immune system cancer | 5.97e-15 | 51 |
carcinoma | 2.52e-13 | 106 |
leukemia | 3.39e-13 | 39 |
myeloid leukemia | 2.72e-12 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.