FFCP PHASE1:Hg19::chr17:2140078..2140091,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23293 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17809 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z874 | |||
|association_with_transcript=49bp_to_ENST00000536871,uc010vqv.1_5end | |||
|description=CAGE_peak_18_at_SMG6_5end | |||
|id=chr17:2140078..2140091,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;4.66e-21;1!CL:0000746;4.84e-08;3!CL:0000135;6.56e-08;3!CL:0002615;6.56e-08;3!CL:0000388;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,7.72e-21,1;CL:0000746,4.84e-08,3;CL:0000513,4.84e-08,3;CL:0000135,6.78e-08,3;CL:0000388,6.78e-08,3;CL:0002615,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.66e-21;1!CL:0000513;4.84e-08;3!UBERON:0009847;6.56e-08;3!UBERON:0003353;6.56e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.80e-22!115;UBERON:0003978!1.92e-10!3;UBERON:0009751!1.92e-10!3;UBERON:0000946!1.92e-10!3;UBERON:0002523!1.92e-10!3;UBERON:0005983!1.92e-10!3;UBERON:0002165!1.92e-10!3;UBERON:0002062!1.92e-10!3;UBERON:0007280!1.92e-10!3;UBERON:0002133!1.02e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;4.66e-21;1!UBERON:0000078;3.18e-11;2!UBERON:0002012;3.18e-11;2!UBERON:0008886;3.18e-11;2!UBERON:0001043;6.56e-08;3!UBERON:0007846;6.56e-08;3!UBERON:0000043;6.56e-08;3!UBERON:0007845;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,3.45e-21,1;UBERON:0000078,4.09e-11,2;UBERON:0007497,4.09e-11,2;UBERON:0003643,4.09e-11,2;UBERON:0003504,4.09e-11,2;UBERON:0003469,4.09e-11,2;UBERON:0003496,4.09e-11,2;UBERON:0002012,4.09e-11,2;UBERON:0008886,4.09e-11,2;UBERON:0007303,4.09e-11,2;UBERON:0002061,4.09e-11,2;UBERON:0005432,4.09e-11,2;UBERON:0004363,4.09e-11,2;UBERON:0007846,6.78e-08,3;UBERON:0000043,6.78e-08,3;UBERON:0007845,6.78e-08,3;UBERON:0001043,7.26e-08,3;UBERON:0009143,7.26e-08,3;UBERON:0004145,7.76e-08,3 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.796991953004279,0.276283915531148,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92375646259493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,1.16386819786103,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0.223171457441873,0.335917362433631,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18951265609875,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,1.41287567130925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0.109940516745429,0,0.385870790539723,0,0,1.96118657403124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38652688589425,0,0,0.109265571963696,0,0,0,0,0,0.378893491091197,0,0,0,0.426467963801962,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,1.833621662743,0,0.665756774185513,0.805095174364105,0 | |||
|short_description=p18@SMG6 | |||
}} |
Revision as of 13:04, 20 January 2014
Short description: | p18@SMG6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SMG6_5end |
Coexpression cluster: | NA |
Association with transcript: | 49bp_to_ENST00000536871, uc010vqv.1_5end |
EntrezGene: | SMG6 |
HGNC: | 17809 |
UniProt: | B7Z874 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 7.72e-21 | 1 |
cardiac muscle cell | 4.84e-08 | 3 |
cardiac muscle myoblast | 4.84e-08 | 3 |
fibrocyte | 6.78e-08 | 3 |
tendon cell | 6.78e-08 | 3 |
adipocyte of omentum tissue | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 3.45e-21 | 1 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.09e-11 | 2 |
developing epithelial placode | 4.09e-11 | 2 |
respiratory system arterial blood vessel | 4.09e-11 | 2 |
respiratory system blood vessel | 4.09e-11 | 2 |
respiratory system artery | 4.09e-11 | 2 |
head blood vessel | 4.09e-11 | 2 |
pulmonary artery | 4.09e-11 | 2 |
pulmonary vascular system | 4.09e-11 | 2 |
pharyngeal vasculature | 4.09e-11 | 2 |
truncus arteriosus | 4.09e-11 | 2 |
aortic sac | 4.09e-11 | 2 |
pharyngeal arch artery | 4.09e-11 | 2 |
dense regular connective tissue | 6.78e-08 | 3 |
tendon | 6.78e-08 | 3 |
regular connective tissue | 6.78e-08 | 3 |
esophagus | 7.26e-08 | 3 |
esophageal region | 7.26e-08 | 3 |
outflow tract | 7.76e-08 | 3 |