FFCP PHASE1:Hg19::chr17:45726654..45726697,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:45726654..45726697,- | |||
|id=chr17:45726654..45726697,- | |||
|ontology_enrichment_celltype=CL:0000988!1.33e-13!182;CL:0000738!1.86e-12!140;CL:0000037!5.15e-12!172;CL:0000566!5.15e-12!172;CL:0000003!1.78e-11!722;CL:0002032!2.93e-11!165;CL:0000837!2.93e-11!165;CL:0002087!4.24e-11!119;CL:0002031!3.36e-10!124;CL:0000838!3.21e-09!52;CL:0000542!8.32e-09!53;CL:0000051!8.32e-09!53;CL:0000012!1.18e-08!682;CL:0000548!1.49e-08!679;CL:0000004!1.49e-08!679;CL:0000255!1.49e-08!679;CL:0000063!6.59e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000771;1.57e-12;2!CL:0002567;1.40e-08;3!CL:0000346;3.01e-08;3!CL:1000428;3.01e-08;3!CL:0000094;4.92e-07;8!CL:0002581;8.47e-07;1!CL:0000895;8.47e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,1.77e-12,2;CL:0002567,1.06e-08,3;CL:0000346,2.42e-08,3;CL:1000428,2.42e-08,3;CL:0000766,2.49e-07,72;CL:0000810,4.78e-07,1;CL:0000895,4.78e-07,1;CL:0002436,4.78e-07,1;CL:0002427,4.78e-07,1;CL:0002428,4.78e-07,1;CL:0002429,4.78e-07,1;CL:0002433,4.78e-07,1;CL:0002431,4.78e-07,1;CL:0002432,4.78e-07,1;CL:0000094,4.83e-07,8;CL:0002581,7.57e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002427;8.47e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;9.51e-07;4!DOID:1612;9.51e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,9.53e-07,4;DOID:1612,9.53e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;3.01e-08;3!UBERON:0001992;3.01e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,2.42e-08,3;UBERON:0001992,2.42e-08,3 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0.261185628199839,0.491467873003018,0,0,0,0,0,0.672325146451775,0,0,0,0,0.612002073732759,0,0,0.821246550437305,0,1.06978768047132,0.821005894499457,1.49550484495991,0.393364276848904,0.383829398097213,0,0,0.90361775633475,0,0.697204805222715,0.426507697462265,0.293600439334847,0,0.601633342410425,0.651032612147555,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0.512321413058201,0.47296445977717,0.344745680736619,0,0,0.376484679085209,0.545812300115692,1.12361742222542,0.918251677112708,2.24650318953266,0,0,0,0,2.61188314765726,0,1.24564449799115,0,0,0,5.44859552370032,1.84138817993782,3.48108626184973,0,0.637812899895131,0.209658645508376,0.22465726229299,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0.853460445133014,0,0.574752439954483,0.661044872784862,0.954053754535364,0,0,0,0,0,0.790152254325231,0.983548850569165,0.393010762749165,0.411202997999018,1.5046784585161,0.32592226663359,0.473447805734733,1.94826728407911,0.334231370655521,0.589211814949674,0.221533894583621,0,0.25618263945135,0.390178042679635,0.164437904603676,0.276350017785848,0,0,0.267540828089713,0,0.113309342697566,1.91610246800961,0.34362744548263,0.253019692019503,0.637130828648193,0,0,0.301150238155546,0.511946444617674,0,0.947109008176067,0.821127996921047,1.00803371612366,0,0.434473211648397,0,0,0,0,0,0,0,0,0.378139268656271,0.443458794925128,0.263504357079378,2.0956652079634,0.364295288292542,0.370784442784429,0,0,0.26591592103773,0.238490624305342,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,0.419499436209906,0,0.626984899610432,0.516833518338658,0,0,0.805658634218294,1.52054421143703,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,1.31780417436063,11.6334079244498,0,0,0,0,0.286836620748814,0,0,1.06748995729705,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0.570471821544449,0,0.23486899728753,0,0.140450806702248,0.204154171254893,0.491337269247072,0,0,0,0,0,0.336672227908132,0,0,0.438977620880838,0.30648779579902,0.600952235626387,0.113432183160021,0,0.427114777637135,0,0.600182192168805,0.206105058476878,0,0.18611685633159,0,0,0.504867548488229,0.276149695926898,0.161646056818812,0,0,0.169560592310488,0,0,0.286804595389004,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0,0.36497735907583,1.56449532329816,0,1.38134921352481,0,0,0.354920400119532,0.337169380156203,0.482022059766964,0.330881918197182,0.217879444092406,0,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,2.37061319387782,2.57545848628462,0.738651018262192,0.234004265139238,0.445893486866185,0,0.335964256397719,0,0,0,0,0,0.176096868026452,0.414656231081544,0,0.25248486685276,0.063497894292169,0,4.68869788840188,1.71072446022705,0.308482478109971,0.600686115687835,0.285826432630578,0.224262168690721,0,0.2933531432838,0,0,0,0,1.04007436911366,0.257207374262142,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0.479249710983165,0,0,0,0.205476322550383,0.179060963239896,0.112085143993527,0.591092280605782,0.862510299438069,0.898401253958239,0,0,0,0,0,0.749007023947182,0,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0.206768026122887,0.862856803274467,0.106727557803444,0.606255142892519,0,0.907170879989041,0,0,0,0.128139149255701,0,0,1.48418066444991,0.308419387605311,0,0.164254312027618,0,0.116210378459959,0.241718899183244,0.200506470303285,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.447749509444357,0.219259876645935,0,0,0,0,0,0.0915694648183434,0.41254749960294,0,0,0,0.676695028044854,0,0.307007349452259,0.413509717453592,0.107420244868274,0,0.170453254832202,0,0.165284915360978,0.192190067365106,0.255225424989168,0,0,0,0,0.616067160352178,0.532306030317022,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0.353437207037059,0.202182481573316,0,0.421258456238981,0,0,0,0.272999822815972,0,0,0.551365343546124,0.66343897524122,0,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0,0,0.354761064070598,0,0,0,0.349934720244983,0.288666338176536,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,0,0,0.507447609232169,1.52927441428475,0,0,0,0,0,0.79312517629427,0,0,0,0,0.28853842595289,0.0711418433484141,0,0.199579371432817,0.383010740264733,0,0,0.561594356226918,0,0.783399478865116,2.50634477090067,0,0.1605880751037,0.605399121573143,0,0,0,0,0,0.390776190804081,0.556812347790485,0,0.270455678475983,0,0,0,0,0,0.334330152832435,0,0.23874448473769,0,0,0,0,0.111308705022906,0.659215496907038,0.211125408127993,0,0.276283915531148,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,1.03423011972439,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.217294743844016,0,0.183195186803725,0,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| |||
|short_description=p@chr17:45726654..45726697,- | |||
}} |
Revision as of 15:55, 20 January 2014
Short description: | p@chr17:45726654..45726697, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:45726654..45726697, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 1.77e-12 | 2 |
light melanocyte | 1.06e-08 | 3 |
hair follicle dermal papilla cell | 2.42e-08 | 3 |
stem cell of epidermis | 2.42e-08 | 3 |
myeloid leukocyte | 2.49e-07 | 72 |
CD4-positive, alpha-beta thymocyte | 4.78e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 4.78e-07 | 1 |
mature CD4 single-positive thymocyte | 4.78e-07 | 1 |
resting double-positive thymocyte | 4.78e-07 | 1 |
double-positive blast | 4.78e-07 | 1 |
CD69-positive double-positive thymocyte | 4.78e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 4.78e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 4.78e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 4.78e-07 | 1 |
granulocyte | 4.83e-07 | 8 |
perirenal preadipocyte | 7.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 2.42e-08 | 3 |
papillary layer of dermis | 2.42e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 9.53e-07 | 4 |
breast cancer | 9.53e-07 | 4 |