FFCP PHASE1:Hg19::chr19:10311892..10311903,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:10311892..10311903,- | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_at_chr19:10311892..10311903,- | |description=CAGE_peak_at_chr19:10311892..10311903,- | ||
|id=chr19:10311892..10311903,- | |id=chr19:10311892..10311903,- | ||
|ontology_enrichment_celltype=CL:0002541!1.96e-34!3;CL:0000039!2.40e-25!7;CL:0000586!2.40e-25!7;CL:0000240!5.45e-17!6;CL:0000311!5.45e-17!6;CL:0000079!5.45e-17!6;CL:0000237!5.45e-17!6;CL:0000036!5.45e-17!6;CL:0000357!5.45e-17!6;CL:0000114!5.45e-17!6;CL:0002336!4.81e-12!1;CL:0002261!4.81e-12!1;CL:0002170!4.81e-12!1;CL:0000312!8.49e-10!5;CL:0000840!3.13e-08!5;CL:0001029!3.13e-08!5 | |ontology_enrichment_celltype=CL:0002541!1.96e-34!3;CL:0000039!2.40e-25!7;CL:0000586!2.40e-25!7;CL:0000240!5.45e-17!6;CL:0000311!5.45e-17!6;CL:0000079!5.45e-17!6;CL:0000237!5.45e-17!6;CL:0000036!5.45e-17!6;CL:0000357!5.45e-17!6;CL:0000114!5.45e-17!6;CL:0002336!4.81e-12!1;CL:0002261!4.81e-12!1;CL:0002170!4.81e-12!1;CL:0000312!8.49e-10!5;CL:0000840!3.13e-08!5;CL:0001029!3.13e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002541;6.61e-74;3!CL:0000349;2.19e-12;19!CL:0000083;1.40e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.55e-74,3;CL:0000349,2.07e-12,19;CL:0000083,1.40e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.72e-26;1 | |||
|ontology_enrichment_disease=DOID:1799!7.89e-13!1;DOID:10165!7.89e-13!1;DOID:1798!7.89e-13!1;DOID:3095!3.05e-08!22;DOID:2994!3.05e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.78e-26;1!DOID:10165;2.78e-26;1!DOID:1798;2.78e-26;1!DOID:1793;1.40e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.78e-26,1;DOID:10165,2.78e-26,1;DOID:1798,2.78e-26,1;DOID:1793,1.40e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.96e-34!3;UBERON:0000920!1.96e-34!3;UBERON:0003124!4.31e-26!7;UBERON:0005631!3.40e-13!14;UBERON:0000158!3.40e-13!14;UBERON:0000478!8.90e-08!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.61e-74;3!UBERON:0000920;6.61e-74;3!UBERON:0005631;7.74e-23;10!UBERON:0000158;7.74e-23;10!UBERON:0000478;6.98e-17;24!UBERON:0001987;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.55e-74,3;UBERON:0003124,1.63e-56,7;UBERON:0005631,1.29e-28,14;UBERON:0000158,1.29e-28,14;UBERON:0000478,6.17e-17,24;UBERON:0001987,1.59e-07,4;UBERON:0004340,1.59e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,5.56497395340587,0.108647371922008,1.27600463892768,1.92354946143911,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88097363929565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86274977341542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,5.56497395340587,0.108647371922008,1.27600463892768,1.92354946143911,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88097363929565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86274977341542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:10311892..10311903,- | |short_description=p@chr19:10311892..10311903,- | ||
}} | }} |
Latest revision as of 02:50, 26 July 2015
Short description: | p@chr19:10311892..10311903, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:10311892..10311903, - |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.55e-74 | 3 |
extraembryonic cell | 2.07e-12 | 19 |
epithelial cell of pancreas | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.55e-74 | 3 |
chorion | 1.63e-56 | 7 |
extraembryonic membrane | 1.29e-28 | 14 |
membranous layer | 1.29e-28 | 14 |
extraembryonic structure | 6.17e-17 | 24 |
placenta | 1.59e-07 | 4 |
allantois | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.78e-26 | 1 |
endocrine pancreas cancer | 2.78e-26 | 1 |
pancreatic endocrine carcinoma | 2.78e-26 | 1 |
pancreatic cancer | 1.40e-07 | 4 |