FFCP PHASE1:Hg19::chr1:156877419..156877434,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:156877419..156877434,+ | |||
|description=CAGE_peak_at_chr1:156877419..156877434,+ | |description=CAGE_peak_at_chr1:156877419..156877434,+ | ||
|id=chr1:156877419..156877434,+ | |id=chr1:156877419..156877434,+ | ||
|ontology_enrichment_celltype=CL:0000066!8.27e-18!254;CL:0000063!6.95e-08!578;CL:0002076!1.91e-07!43 | |ontology_enrichment_celltype=CL:0000066!8.27e-18!254;CL:0000063!6.95e-08!578;CL:0002076!1.91e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002368;4.29e-16;13!CL:1000415;2.71e-09;2!CL:0002076;4.85e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.23e-18,253;CL:0002368,4.17e-16,13;CL:0002076,1.25e-10,42;CL:1000415,2.60e-09,2;CL:0000076,2.17e-07,63;CL:0000223,4.27e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.28e-11!106;DOID:162!1.61e-08!235;DOID:14566!3.38e-08!239;DOID:1749!9.16e-08!14;DOID:0050687!1.77e-07!143 | |ontology_enrichment_disease=DOID:305!1.28e-11!106;DOID:162!1.61e-08!235;DOID:14566!3.38e-08!239;DOID:1749!9.16e-08!14;DOID:0050687!1.77e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.73e-18;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.88e-18,14;DOID:305,1.88e-11,106;DOID:0050687,2.56e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.37e-12!169;UBERON:0000925!4.37e-12!169;UBERON:0006595!4.37e-12!169;UBERON:0003102!3.17e-10!95;UBERON:0001007!1.19e-09!155;UBERON:0001555!1.19e-09!155;UBERON:0007026!1.19e-09!155;UBERON:0000077!1.68e-08!130;UBERON:0004921!2.32e-08!129;UBERON:0004185!2.32e-08!129;UBERON:0001737!2.40e-08!9;UBERON:0001004!5.31e-08!72;UBERON:0000161!5.81e-08!35;UBERON:0000065!7.04e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;2.51e-10;4!UBERON:0004785;2.51e-10;4!UBERON:0002294;3.09e-10;7!UBERON:0001173;3.09e-10;7!UBERON:0004909;2.71e-09;2!UBERON:0000974;5.04e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.85e-10,4;UBERON:0004785,1.85e-10,4;UBERON:0004909,3.22e-09,2;UBERON:0002294,5.29e-08,9;UBERON:0001173,5.29e-08,9;UBERON:0004912,5.29e-08,9;UBERON:0000065,1.49e-07,54;UBERON:0001004,3.48e-07,74;UBERON:0004119,4.74e-07,160;UBERON:0000925,4.74e-07,160;UBERON:0006595,4.74e-07,160 | |||
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| ||
|short_description=p@chr1:156877419..156877434,+ | |short_description=p@chr1:156877419..156877434,+ | ||
}} | }} |
Latest revision as of 22:47, 27 July 2015
Short description: | p@chr1:156877419..156877434, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:156877419..156877434, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.23e-18 | 253 |
respiratory epithelial cell | 4.17e-16 | 13 |
endo-epithelial cell | 1.25e-10 | 42 |
epithelial cell of gall bladder | 2.60e-09 | 2 |
squamous epithelial cell | 2.17e-07 | 63 |
endodermal cell | 4.27e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.85e-10 | 4 |
respiratory system mucosa | 1.85e-10 | 4 |
epithelium of gonad | 3.22e-09 | 2 |
biliary system | 5.29e-08 | 9 |
biliary tree | 5.29e-08 | 9 |
biliary bud | 5.29e-08 | 9 |
respiratory tract | 1.49e-07 | 54 |
respiratory system | 3.48e-07 | 74 |
endoderm-derived structure | 4.74e-07 | 160 |
endoderm | 4.74e-07 | 160 |
presumptive endoderm | 4.74e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.88e-18 | 14 |
carcinoma | 1.88e-11 | 106 |
cell type cancer | 2.56e-08 | 143 |