FFCP PHASE1:Hg19::chr1:24927382..24927395,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:24927382..24927395,+ | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_at_chr1:24927382..24927395,+ | |description=CAGE_peak_at_chr1:24927382..24927395,+ | ||
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|ontology_enrichment_celltype=CL:0002541!4.17e-55!3;CL:0000039!2.83e-11!7;CL:0000586!2.83e-11!7 | |ontology_enrichment_celltype=CL:0002541!4.17e-55!3;CL:0000039!2.83e-11!7;CL:0000586!2.83e-11!7 | ||
|ontology_enrichment_celltype_v019=CL:0002541;6.36e-118;3!CL:0000349;1.53e-19;19!CL:0000083;3.60e-11;4!CL:0000039;5.38e-07;7!CL:0000586;5.38e-07;7 | |ontology_enrichment_celltype_v019=CL:0002541;6.36e-118;3!CL:0000349;1.53e-19;19!CL:0000083;3.60e-11;4!CL:0000039;5.38e-07;7!CL:0000586;5.38e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,7.78e-118,3;CL:0000349,1.58e-19,19;CL:0000083,3.42e-11,4;CL:0000039,5.38e-07,7;CL:0000586,5.38e-07,7 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1799!1.56e-19!1;DOID:10165!1.56e-19!1;DOID:1798!1.56e-19!1;DOID:178!3.91e-19!1;DOID:326!3.91e-19!1;DOID:3978!3.91e-19!1;DOID:3394!3.91e-19!1;DOID:5844!3.91e-19!1;DOID:114!2.99e-10!2 | |ontology_enrichment_disease=DOID:1799!1.56e-19!1;DOID:10165!1.56e-19!1;DOID:1798!1.56e-19!1;DOID:178!3.91e-19!1;DOID:326!3.91e-19!1;DOID:3978!3.91e-19!1;DOID:3394!3.91e-19!1;DOID:5844!3.91e-19!1;DOID:114!2.99e-10!2 | ||
|ontology_enrichment_disease_v019=DOID:1799;2.70e-40;1!DOID:10165;2.70e-40;1!DOID:1798;2.70e-40;1!DOID:1793;3.60e-11;4!DOID:170;7.01e-08;6 | |ontology_enrichment_disease_v019=DOID:1799;2.70e-40;1!DOID:10165;2.70e-40;1!DOID:1798;2.70e-40;1!DOID:1793;3.60e-11;4!DOID:170;7.01e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,2.21e-40,1;DOID:10165,2.21e-40,1;DOID:1798,2.21e-40,1;DOID:1793,3.42e-11,4;DOID:170,6.78e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000476!4.17e-55!3;UBERON:0000920!4.17e-55!3;UBERON:0003124!8.85e-42!7;UBERON:0005631!2.03e-32!14;UBERON:0000158!2.03e-32!14;UBERON:0000478!5.22e-19!24;UBERON:0004923!4.73e-08!57 | |ontology_enrichment_uberon=UBERON:0000476!4.17e-55!3;UBERON:0000920!4.17e-55!3;UBERON:0003124!8.85e-42!7;UBERON:0005631!2.03e-32!14;UBERON:0000158!2.03e-32!14;UBERON:0000478!5.22e-19!24;UBERON:0004923!4.73e-08!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.36e-118;3!UBERON:0000920;6.36e-118;3!UBERON:0005631;3.24e-36;10!UBERON:0000158;3.24e-36;10!UBERON:0000478;1.16e-15;24 | |ontology_enrichment_uberon_v019=UBERON:0003124;6.36e-118;3!UBERON:0000920;6.36e-118;3!UBERON:0005631;3.24e-36;10!UBERON:0000158;3.24e-36;10!UBERON:0000478;1.16e-15;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,7.78e-118,3;UBERON:0003124,3.24e-51,7;UBERON:0005631,3.76e-26,14;UBERON:0000158,3.76e-26,14;UBERON:0000478,1.19e-15,24 | |||
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|short_description=p@chr1:24927382..24927395,+ | |short_description=p@chr1:24927382..24927395,+ | ||
}} | }} |
Latest revision as of 06:19, 28 July 2015
Short description: | p@chr1:24927382..24927395, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:24927382..24927395, + |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 7.78e-118 | 3 |
extraembryonic cell | 1.58e-19 | 19 |
epithelial cell of pancreas | 3.42e-11 | 4 |
germ line cell | 5.38e-07 | 7 |
germ cell | 5.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 7.78e-118 | 3 |
chorion | 3.24e-51 | 7 |
extraembryonic membrane | 3.76e-26 | 14 |
membranous layer | 3.76e-26 | 14 |
extraembryonic structure | 1.19e-15 | 24 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.21e-40 | 1 |
endocrine pancreas cancer | 2.21e-40 | 1 |
pancreatic endocrine carcinoma | 2.21e-40 | 1 |
pancreatic cancer | 3.42e-11 | 4 |
endocrine gland cancer | 6.78e-08 | 6 |