FFCP PHASE1:Hg19::chr20:46040915..46040932,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=138bp_to_ENST00000437920_5end | |association_with_transcript=138bp_to_ENST00000437920_5end | ||
|cluster_id=chr20:46040915..46040932,- | |||
|coexpression_cluster_id=C78 | |coexpression_cluster_id=C78 | ||
|description=CAGE_peak_1_at_ENST00000437920_5end | |description=CAGE_peak_1_at_ENST00000437920_5end | ||
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|ontology_enrichment_celltype=CL:0000945!4.29e-56!24;CL:0000826!4.29e-56!24;CL:0000542!9.49e-27!53;CL:0000051!9.49e-27!53;CL:0000236!1.62e-24!14;CL:0000838!5.37e-24!52;CL:0000785!1.15e-12!2;CL:0000955!1.15e-12!2;CL:0000818!1.15e-12!2;CL:0000954!1.15e-12!2;CL:0000816!1.15e-12!2;CL:0002087!1.52e-12!119;CL:0000738!4.57e-10!140;CL:0002031!3.46e-09!124;CL:0000817!1.01e-08!3;CL:0000037!1.83e-07!172;CL:0000566!1.83e-07!172;CL:0000819!3.32e-07!1;CL:0000946!3.95e-07!1;CL:0000786!3.95e-07!1;CL:0000980!3.95e-07!1;CL:0002032!5.48e-07!165;CL:0000837!5.48e-07!165;CL:0000988!7.64e-07!182 | |ontology_enrichment_celltype=CL:0000945!4.29e-56!24;CL:0000826!4.29e-56!24;CL:0000542!9.49e-27!53;CL:0000051!9.49e-27!53;CL:0000236!1.62e-24!14;CL:0000838!5.37e-24!52;CL:0000785!1.15e-12!2;CL:0000955!1.15e-12!2;CL:0000818!1.15e-12!2;CL:0000954!1.15e-12!2;CL:0000816!1.15e-12!2;CL:0002087!1.52e-12!119;CL:0000738!4.57e-10!140;CL:0002031!3.46e-09!124;CL:0000817!1.01e-08!3;CL:0000037!1.83e-07!172;CL:0000566!1.83e-07!172;CL:0000819!3.32e-07!1;CL:0000946!3.95e-07!1;CL:0000786!3.95e-07!1;CL:0000980!3.95e-07!1;CL:0002032!5.48e-07!165;CL:0000837!5.48e-07!165;CL:0000988!7.64e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.17e-37;24!CL:0000785;3.15e-26;1!CL:0000819;3.15e-26;1!CL:0000946;6.72e-26;1!CL:0000786;6.72e-26;1!CL:0000542;8.26e-14;53 | |ontology_enrichment_celltype_v019=CL:0000945;3.17e-37;24!CL:0000785;3.15e-26;1!CL:0000819;3.15e-26;1!CL:0000946;6.72e-26;1!CL:0000786;6.72e-26;1!CL:0000542;8.26e-14;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000785,4.00e-50,2;CL:0000955,4.00e-50,2;CL:0000818,4.00e-50,2;CL:0000954,4.00e-50,2;CL:0000816,4.00e-50,2;CL:0000945,3.17e-37,24;CL:0000826,3.17e-37,24;CL:0000817,7.70e-34,3;CL:0000819,3.58e-26,1;CL:0000946,7.62e-26,1;CL:0000786,7.62e-26,1;CL:0000980,7.62e-26,1;CL:0000542,6.50e-23,53;CL:0000051,6.50e-23,53;CL:0000838,2.51e-17,52;CL:0002087,1.68e-10,115;CL:0000738,6.97e-09,136;CL:0000236,4.66e-08,14;CL:0002032,1.70e-07,161;CL:0000837,1.70e-07,161;CL:0002031,1.73e-07,120;CL:0000037,3.51e-07,168;CL:0000988,8.25e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000954;3.11e-50;2!UBERON:0001045;1.11e-25;1!CL:0000051;8.26e-14;53 | |ontology_enrichment_development_v019=CL:0000954;3.11e-50;2!UBERON:0001045;1.11e-25;1!CL:0000051;8.26e-14;53 | ||
|ontology_enrichment_disease=DOID:0060058!3.23e-14!10;DOID:0060073!3.32e-07!1;DOID:8675!3.32e-07!1;DOID:12603!4.43e-07!1 | |ontology_enrichment_disease=DOID:0060058!3.23e-14!10;DOID:0060073!3.32e-07!1;DOID:8675!3.32e-07!1;DOID:12603!4.43e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:0060058;3.51e-40;10!DOID:0060073;3.15e-26;1!DOID:8675;3.15e-26;1!DOID:12603;1.11e-25;1!DOID:2531;2.19e-07;51!DOID:0060083;2.19e-07;51 | |ontology_enrichment_disease_v019=DOID:0060058;3.51e-40;10!DOID:0060073;3.15e-26;1!DOID:8675;3.15e-26;1!DOID:12603;1.11e-25;1!DOID:2531;2.19e-07;51!DOID:0060083;2.19e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.51e-40,10;DOID:0060073,3.58e-26,1;DOID:8675,3.58e-26,1;DOID:12603,1.26e-25,1;DOID:2531,1.89e-12,51;DOID:0060083,1.89e-12,51 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.52e-16!3;UBERON:0004854!1.52e-16!3;UBERON:0009034!1.52e-16!3;UBERON:0002095!1.52e-16!3;UBERON:0004782!1.52e-16!3;UBERON:0003281!1.52e-16!3;UBERON:0009664!1.52e-16!3;UBERON:0002296!1.52e-16!3;UBERON:0005602!1.52e-16!3;UBERON:0001179!1.52e-16!3;UBERON:0006293!1.52e-16!3;UBERON:0007023!1.58e-08!115;UBERON:0004177!2.26e-07!7;UBERON:0001154!4.18e-07!1;UBERON:0001153!4.18e-07!1;UBERON:0002372!5.57e-07!1;UBERON:0001961!5.57e-07!1;UBERON:0001744!5.57e-07!1;UBERON:0001735!5.57e-07!1;UBERON:0000029!8.27e-07!1;UBERON:0000998!8.75e-07!1;UBERON:0006868!8.75e-07!1 | |ontology_enrichment_uberon=UBERON:0002106!1.52e-16!3;UBERON:0004854!1.52e-16!3;UBERON:0009034!1.52e-16!3;UBERON:0002095!1.52e-16!3;UBERON:0004782!1.52e-16!3;UBERON:0003281!1.52e-16!3;UBERON:0009664!1.52e-16!3;UBERON:0002296!1.52e-16!3;UBERON:0005602!1.52e-16!3;UBERON:0001179!1.52e-16!3;UBERON:0006293!1.52e-16!3;UBERON:0007023!1.58e-08!115;UBERON:0004177!2.26e-07!7;UBERON:0001154!4.18e-07!1;UBERON:0001153!4.18e-07!1;UBERON:0002372!5.57e-07!1;UBERON:0001961!5.57e-07!1;UBERON:0001744!5.57e-07!1;UBERON:0001735!5.57e-07!1;UBERON:0000029!8.27e-07!1;UBERON:0000998!8.75e-07!1;UBERON:0006868!8.75e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.11e-25;1!UBERON:0001153;1.11e-25;1!UBERON:0009854;1.11e-25;1!UBERON:0009856;1.98e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001154;1.11e-25;1!UBERON:0001153;1.11e-25;1!UBERON:0009854;1.11e-25;1!UBERON:0009856;1.98e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,9.79e-26,1;UBERON:0001153,9.79e-26,1;UBERON:0001045,9.79e-26,1 | |||
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|short_description=p1@ENST00000437920 | |short_description=p1@ENST00000437920 | ||
}} | }} |
Latest revision as of 14:47, 28 July 2015
Short description: | p1@ENST00000437920 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000437920_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | 138bp_to_ENST00000437920_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature B cell | 4.00e-50 | 2 |
pre-B-II cell | 4.00e-50 | 2 |
transitional stage B cell | 4.00e-50 | 2 |
small pre-B-II cell | 4.00e-50 | 2 |
immature B cell | 4.00e-50 | 2 |
lymphocyte of B lineage | 3.17e-37 | 24 |
pro-B cell | 3.17e-37 | 24 |
precursor B cell | 7.70e-34 | 3 |
B-1 B cell | 3.58e-26 | 1 |
antibody secreting cell | 7.62e-26 | 1 |
plasma cell | 7.62e-26 | 1 |
plasmablast | 7.62e-26 | 1 |
lymphocyte | 6.50e-23 | 53 |
common lymphoid progenitor | 6.50e-23 | 53 |
lymphoid lineage restricted progenitor cell | 2.51e-17 | 52 |
nongranular leukocyte | 1.68e-10 | 115 |
leukocyte | 6.97e-09 | 136 |
B cell | 4.66e-08 | 14 |
hematopoietic oligopotent progenitor cell | 1.70e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.70e-07 | 161 |
hematopoietic lineage restricted progenitor cell | 1.73e-07 | 120 |
hematopoietic stem cell | 3.51e-07 | 168 |
hematopoietic cell | 8.25e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 9.79e-26 | 1 |
caecum | 9.79e-26 | 1 |
midgut | 9.79e-26 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.51e-40 | 10 |
lymphatic system cancer | 3.58e-26 | 1 |
lymphosarcoma | 3.58e-26 | 1 |
acute leukemia | 1.26e-25 | 1 |
hematologic cancer | 1.89e-12 | 51 |
immune system cancer | 1.89e-12 | 51 |