FFCP PHASE1:Hg19::chr21:36339613..36339615,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr21:36339613..36339615,-|id=chr21:36339613..36339615,-|ontology_enrichment_celltype=CL:0000037!5.00e-28!172;CL:0000566!5.00e-28!172;CL:0002032!4.64e-26!165;CL:0000837!4.64e-26!165;CL:0000988!1.45e-25!182;CL:0000738!6.91e-25!140;CL:0002087!8.49e-24!119;CL:0002031!2.73e-23!124;CL:0000763!1.05e-15!112;CL:0000049!1.05e-15!112;CL:0000839!6.58e-15!70;CL:0000766!1.48e-14!76;CL:0000557!1.12e-13!71;CL:0002057!3.03e-12!42;CL:0002194!5.87e-12!63;CL:0000576!5.87e-12!63;CL:0000040!5.87e-12!63;CL:0000559!5.87e-12!63;CL:0002009!3.01e-11!65;CL:0000084!4.51e-11!25;CL:0000827!4.51e-11!25;CL:0000791!5.69e-11!18;CL:0000789!5.69e-11!18;CL:0002420!5.69e-11!18;CL:0002419!5.69e-11!18;CL:0000790!5.69e-11!18;CL:0000860!7.90e-11!45;CL:0000542!5.09e-10!53;CL:0000051!5.09e-10!53;CL:0000838!1.97e-09!52;CL:0000625!5.03e-07!11|ontology_enrichment_celltype_v019=CL:0002393;1.06e-10;6!CL:0002397;1.06e-10;6!CL:0000623;4.67e-10;3!CL:0000226;8.95e-10;3!CL:0000842;8.95e-10;3!CL:0000576;3.66e-07;48|ontology_enrichment_celltype_v019_2=CL:0002087,1.12e-11,115;CL:0000860,1.19e-11,42;CL:0002057,1.19e-11,42;CL:0000738,8.30e-11,136;CL:0000623,3.19e-10,3;CL:0000825,3.19e-10,3;CL:0000473,5.14e-10,48;CL:0000234,5.14e-10,48;CL:0000226,7.85e-10,3;CL:0000842,7.85e-10,3;CL:0000037,2.54e-09,168;CL:0000988,1.14e-08,177;CL:0002031,3.27e-08,120;CL:0002194,9.95e-08,59;CL:0000576,9.95e-08,59;CL:0000040,9.95e-08,59;CL:0000559,9.95e-08,59;CL:0002009,1.96e-07,61;CL:0002393,2.59e-07,9;CL:0002397,2.59e-07,9;CL:0000839,8.94e-07,66|ontology_enrichment_development_v019=CL:0002057;4.97e-09;42|ontology_enrichment_disease=DOID:2531!5.59e-07!51;DOID:0060083!5.59e-07!51|ontology_enrichment_disease_v019=DOID:3112;5.97e-08;1|ontology_enrichment_disease_v019_2=DOID:3112,8.12e-08,1|ontology_enrichment_uberon=UBERON:0002390!8.91e-16!102;UBERON:0003061!8.91e-16!102;UBERON:0002193!2.20e-14!112;UBERON:0002371!3.16e-12!80;UBERON:0001474!4.84e-11!86;UBERON:0002405!1.84e-08!115;UBERON:0004765!3.74e-08!101;UBERON:0001434!3.74e-08!101|ontology_enrichment_uberon_v019=UBERON:0002038;5.97e-08;1!UBERON:0009661;5.97e-08;1!UBERON:0002950;5.97e-08;1!UBERON:0001891;5.97e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.21e-09,98;UBERON:0003061,5.21e-09,98;UBERON:0002193,5.82e-08,108;UBERON:0002038,7.59e-08,1;UBERON:0009661,7.59e-08,1;UBERON:0002950,7.59e-08,1;UBERON:0001891,7.59e-08,1;UBERON:0009616,7.59e-08,1;UBERON:0010286,7.59e-08,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0.387336002901508,0,0,2.76997704265939,1.00272223735071,1.73608696572681,0.223915474239924,0.32389366601898,0.257575567634187,0.436194716338694,0,0.485168122375632,0,0,0.309706370895104,0.863077176966451,0.256160706529101,0.945928919554341,1.03423704220986,1.29096936716765,1.35426486594342,0.376484679085209,0.272906150057846,0.224723484445085,0.306083892370903,0,0.639337125799041,0.329851300186716,0.199463657621632,0.426224750532694,0,0.56738522469114,0,2.51248665256743,3.65038042894141,2.17188844705117,0,0,0,0,0,0.628975936525128,0,0,0.16072558669708,0.855038231223746,0,0,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0.382273228125229,0,0,1.05353633910031,0.393419540227666,2.35806457649499,1.23360899399706,0.167186495390678,0.651844533267181,0,0,0,0,0.221533894583621,0.270803863765016,1.0247305578054,0.520237390239513,2.63100647365882,0.829050053357545,0.289803085735052,0.741432815810302,0,0,0.453237370790265,0.383220493601921,1.71813722741315,0,0.318565414324097,0.651083453856419,0.950452044448374,0.150575119077773,0,0,0.710331756132051,0.821127996921047,1.00803371612366,0.534880391567015,0.579297615531196,0,0,0,0,0,0,0,0.486634870302636,0,0,0.263504357079378,0.0654895377488563,0,0,0,0.174129737299267,0.26591592103773,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0.335964256397719,0,0.0895585227028483,0,0,0.985326475791887,0.880484340132261,0.207328115540772,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0.410952645100767,0.179060963239896,0.224170287987055,0.591092280605782,2.58753089831421,1.66845947163673,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.620304078368662,1.2942852049117,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr21:36339613..36339615,- | |||
|id=chr21:36339613..36339615,- | |||
|ontology_enrichment_celltype=CL:0000037!5.00e-28!172;CL:0000566!5.00e-28!172;CL:0002032!4.64e-26!165;CL:0000837!4.64e-26!165;CL:0000988!1.45e-25!182;CL:0000738!6.91e-25!140;CL:0002087!8.49e-24!119;CL:0002031!2.73e-23!124;CL:0000763!1.05e-15!112;CL:0000049!1.05e-15!112;CL:0000839!6.58e-15!70;CL:0000766!1.48e-14!76;CL:0000557!1.12e-13!71;CL:0002057!3.03e-12!42;CL:0002194!5.87e-12!63;CL:0000576!5.87e-12!63;CL:0000040!5.87e-12!63;CL:0000559!5.87e-12!63;CL:0002009!3.01e-11!65;CL:0000084!4.51e-11!25;CL:0000827!4.51e-11!25;CL:0000791!5.69e-11!18;CL:0000789!5.69e-11!18;CL:0002420!5.69e-11!18;CL:0002419!5.69e-11!18;CL:0000790!5.69e-11!18;CL:0000860!7.90e-11!45;CL:0000542!5.09e-10!53;CL:0000051!5.09e-10!53;CL:0000838!1.97e-09!52;CL:0000625!5.03e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.06e-10;6!CL:0002397;1.06e-10;6!CL:0000623;4.67e-10;3!CL:0000226;8.95e-10;3!CL:0000842;8.95e-10;3!CL:0000576;3.66e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.12e-11,115;CL:0000860,1.19e-11,42;CL:0002057,1.19e-11,42;CL:0000738,8.30e-11,136;CL:0000623,3.19e-10,3;CL:0000825,3.19e-10,3;CL:0000473,5.14e-10,48;CL:0000234,5.14e-10,48;CL:0000226,7.85e-10,3;CL:0000842,7.85e-10,3;CL:0000037,2.54e-09,168;CL:0000988,1.14e-08,177;CL:0002031,3.27e-08,120;CL:0002194,9.95e-08,59;CL:0000576,9.95e-08,59;CL:0000040,9.95e-08,59;CL:0000559,9.95e-08,59;CL:0002009,1.96e-07,61;CL:0002393,2.59e-07,9;CL:0002397,2.59e-07,9;CL:0000839,8.94e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;4.97e-09;42 | |||
|ontology_enrichment_disease=DOID:2531!5.59e-07!51;DOID:0060083!5.59e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:3112;5.97e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,8.12e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.91e-16!102;UBERON:0003061!8.91e-16!102;UBERON:0002193!2.20e-14!112;UBERON:0002371!3.16e-12!80;UBERON:0001474!4.84e-11!86;UBERON:0002405!1.84e-08!115;UBERON:0004765!3.74e-08!101;UBERON:0001434!3.74e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;5.97e-08;1!UBERON:0009661;5.97e-08;1!UBERON:0002950;5.97e-08;1!UBERON:0001891;5.97e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.21e-09,98;UBERON:0003061,5.21e-09,98;UBERON:0002193,5.82e-08,108;UBERON:0002038,7.59e-08,1;UBERON:0009661,7.59e-08,1;UBERON:0002950,7.59e-08,1;UBERON:0001891,7.59e-08,1;UBERON:0009616,7.59e-08,1;UBERON:0010286,7.59e-08,1 | |||
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| |||
|short_description=p@chr21:36339613..36339615,- | |||
}} |
Revision as of 10:14, 12 September 2013
Short description: | p@chr21:36339613..36339615, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr21:36339613..36339615, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.12e-11 | 115 |
classical monocyte | 1.19e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.19e-11 | 42 |
leukocyte | 8.30e-11 | 136 |
natural killer cell | 3.19e-10 | 3 |
pro-NK cell | 3.19e-10 | 3 |
defensive cell | 5.14e-10 | 48 |
phagocyte | 5.14e-10 | 48 |
single nucleate cell | 7.85e-10 | 3 |
mononuclear cell | 7.85e-10 | 3 |
hematopoietic stem cell | 2.54e-09 | 168 |
hematopoietic cell | 1.14e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 3.27e-08 | 120 |
monopoietic cell | 9.95e-08 | 59 |
monocyte | 9.95e-08 | 59 |
monoblast | 9.95e-08 | 59 |
promonocyte | 9.95e-08 | 59 |
macrophage dendritic cell progenitor | 1.96e-07 | 61 |
intermediate monocyte | 2.59e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.59e-07 | 9 |
myeloid lineage restricted progenitor cell | 8.94e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.21e-09 | 98 |
blood island | 5.21e-09 | 98 |
hemolymphoid system | 5.82e-08 | 108 |
substantia nigra | 7.59e-08 | 1 |
midbrain nucleus | 7.59e-08 | 1 |
regional part of midbrain | 7.59e-08 | 1 |
midbrain | 7.59e-08 | 1 |
presumptive midbrain | 7.59e-08 | 1 |
midbrain neural tube | 7.59e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 8.12e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.