FFCP PHASE1:Hg19::chr4:111437122..111437129,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:111437122..111437129,- | |||
|description=CAGE_peak_at_chr4:111437122..111437129,- | |description=CAGE_peak_at_chr4:111437122..111437129,- | ||
|id=chr4:111437122..111437129,- | |id=chr4:111437122..111437129,- | ||
|ontology_enrichment_celltype=CL:1001319;4.10e-23;1!CL:1000600;4.10e-23;1!CL:0002202;8.57e-11;9!CL:0002632;8.57e-11;9!CL:0000307;9.31e-09;3!CL:0002328;1.30e-08;3!CL:0002368;9.35e-08;13!CL:0000244;9.10e-07;4!CL:0000731;9.10e-07;4 | |ontology_enrichment_celltype=CL:0000066!2.10e-11!254;CL:0002076!2.19e-10!43;CL:0000223!8.41e-10!59;CL:0002368!3.80e-09!13;CL:0002202!2.08e-07!9;CL:0002632!2.08e-07!9 | ||
| | |ontology_enrichment_celltype_v019=CL:1001319;4.10e-23;1!CL:1000600;4.10e-23;1!CL:0002202;8.57e-11;9!CL:0002632;8.57e-11;9!CL:0000307;9.31e-09;3!CL:0002328;1.30e-08;3!CL:0002368;9.35e-08;13!CL:0000244;9.10e-07;4!CL:0000731;9.10e-07;4 | ||
|ontology_enrichment_disease=DOID:1749;6.22e-15;14!DOID:4929;2.07e-12;2 | |ontology_enrichment_celltype_v019_2=CL:1001319,3.28e-23,1;CL:1000600,3.28e-23,1;CL:0002202,9.69e-11,9;CL:0002632,9.69e-11,9;CL:0000068,9.66e-09,3;CL:0000069,9.66e-09,3;CL:0000307,9.66e-09,3;CL:0000377,9.66e-09,3;CL:0002328,1.51e-08,3;CL:0002368,1.02e-07,13;CL:0000244,8.14e-07,4;CL:0000731,8.14e-07,4 | ||
|ontology_enrichment_uberon=UBERON:0004913;2.09e-23;1!UBERON:0003703;2.09e-23;1!UBERON:0001174;2.09e-23;1!UBERON:0004914;2.09e-23;1!UBERON:0004645;4.10e-23;1!UBERON:0001256;4.10e-23;1!UBERON:0001259;4.10e-23;1!UBERON:0000365;1.93e-18;5!UBERON:0005910;1.52e-15;6!UBERON:0001255;2.90e-12;2!UBERON:0001556;2.90e-12;2!UBERON:0001723;8.31e-09;3!UBERON:0001033;8.31e-09;3!UBERON:0002114;1.04e-08;2!UBERON:0004815;1.30e-08;3!UBERON:0002031;1.30e-08;3!UBERON:0000486;2.96e-08;12!UBERON:0003343;6.50e-07;4!UBERON:0004785;6.50e-07;4!UBERON:0002394;7.69e-07;4!UBERON:0003928;7.69e-07;4!UBERON:0007196;7.75e-07;15!UBERON:0001558;7.75e-07;15 | |ontology_enrichment_development_v019=UBERON:0008814;1.48e-12;2!UBERON:0010056;1.48e-12;2!CL:0000377;9.31e-09;3 | ||
|ontology_enrichment_disease=DOID:162!1.76e-16!235;DOID:14566!7.23e-16!239;DOID:305!3.62e-14!106;DOID:0050687!7.25e-14!143;DOID:1749!2.31e-11!14;DOID:0050686!2.54e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.22e-15;14!DOID:4929;2.07e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.37e-15,14;DOID:4929,2.07e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0004807!2.68e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.09e-23;1!UBERON:0003703;2.09e-23;1!UBERON:0001174;2.09e-23;1!UBERON:0004914;2.09e-23;1!UBERON:0004645;4.10e-23;1!UBERON:0001256;4.10e-23;1!UBERON:0001259;4.10e-23;1!UBERON:0000365;1.93e-18;5!UBERON:0005910;1.52e-15;6!UBERON:0001255;2.90e-12;2!UBERON:0001556;2.90e-12;2!UBERON:0001723;8.31e-09;3!UBERON:0001033;8.31e-09;3!UBERON:0002114;1.04e-08;2!UBERON:0004815;1.30e-08;3!UBERON:0002031;1.30e-08;3!UBERON:0000486;2.96e-08;12!UBERON:0003343;6.50e-07;4!UBERON:0004785;6.50e-07;4!UBERON:0002394;7.69e-07;4!UBERON:0003928;7.69e-07;4!UBERON:0007196;7.75e-07;15!UBERON:0001558;7.75e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.10e-23,1;UBERON:0003703,2.10e-23,1;UBERON:0001174,2.10e-23,1;UBERON:0004914,2.10e-23,1;UBERON:0004645,3.28e-23,1;UBERON:0001256,3.28e-23,1;UBERON:0001259,3.28e-23,1;UBERON:0000365,1.48e-18,5;UBERON:0005910,1.22e-15,6;UBERON:0001255,2.59e-12,2;UBERON:0001556,2.59e-12,2;UBERON:0001723,8.31e-09,3;UBERON:0001033,8.31e-09,3;UBERON:0010056,8.31e-09,3;UBERON:0002114,1.04e-08,2;UBERON:0004815,1.51e-08,3;UBERON:0002031,1.51e-08,3;UBERON:0003343,6.50e-07,4;UBERON:0004785,6.50e-07,4;UBERON:0007196,8.33e-07,15;UBERON:0001558,8.33e-07,15 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,4.3556393944529,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629078458031288,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0.254253650292766,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0.189753732724185,1.43042921082341,0,0,0,0,0,0,0,0.889563386041866,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.751617097072463,0,0,0,0,0,0.284609546029793,0,0,0,0.783532859223623,0,0.171986032471617,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0.72045208577053,0,0,0.576219191952599,0,0.235694034616795,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0.338693328263138,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.121792598380896,1.27668251554036,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0.151649117541648,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0.422624246717254,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.89180897366725,0,0,0,0,0,0,0,0,2.06998520703863,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0,0.345701962667338,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0.243835849964539,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,4.94052820401969,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,1.62806537221949,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr4:111437122..111437129,- | |short_description=p@chr4:111437122..111437129,- | ||
}} | }} |
Latest revision as of 00:55, 30 July 2015
Short description: | p@chr4:111437122..111437129, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:111437122..111437129, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 3.28e-23 | 1 |
lower urinary tract cell | 3.28e-23 | 1 |
epithelial cell of tracheobronchial tree | 9.69e-11 | 9 |
epithelial cell of lower respiratory tract | 9.69e-11 | 9 |
duct epithelial cell | 9.66e-09 | 3 |
branched duct epithelial cell | 9.66e-09 | 3 |
tracheal epithelial cell | 9.66e-09 | 3 |
tracheoblast | 9.66e-09 | 3 |
bronchial epithelial cell | 1.51e-08 | 3 |
respiratory epithelial cell | 1.02e-07 | 13 |
transitional epithelial cell | 8.14e-07 | 4 |
urothelial cell | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.10e-23 | 1 |
extrahepatic bile duct | 2.10e-23 | 1 |
common bile duct | 2.10e-23 | 1 |
duodenal papilla | 2.10e-23 | 1 |
urinary bladder urothelium | 3.28e-23 | 1 |
wall of urinary bladder | 3.28e-23 | 1 |
mucosa of urinary bladder | 3.28e-23 | 1 |
urothelium | 1.48e-18 | 5 |
transitional epithelium | 1.22e-15 | 6 |
urinary bladder | 2.59e-12 | 2 |
lower urinary tract | 2.59e-12 | 2 |
tongue | 8.31e-09 | 3 |
gustatory system | 8.31e-09 | 3 |
future tongue | 8.31e-09 | 3 |
duodenum | 1.04e-08 | 2 |
lower respiratory tract epithelium | 1.51e-08 | 3 |
epithelium of bronchus | 1.51e-08 | 3 |
mucosa of oral region | 6.50e-07 | 4 |
respiratory system mucosa | 6.50e-07 | 4 |
tracheobronchial tree | 8.33e-07 | 15 |
lower respiratory tract | 8.33e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.37e-15 | 14 |
tubular adenocarcinoma | 2.07e-12 | 2 |