FFCP PHASE1:Hg19::chr4:40059575..40059582,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:40059575..40059582,- | |||
|description=CAGE_peak_at_chr4:40059575..40059582,- | |description=CAGE_peak_at_chr4:40059575..40059582,- | ||
|id=chr4:40059575..40059582,- | |id=chr4:40059575..40059582,- | ||
|ontology_enrichment_celltype=CL:0000738!2.76e-15!140;CL:0000037!7.28e-14!172;CL:0000566!7.28e-14!172;CL:0000988!8.85e-14!182;CL:0002087!9.54e-13!119;CL:0002032!4.71e-12!165;CL:0000837!4.71e-12!165;CL:0002031!7.37e-12!124;CL:0000860!2.16e-08!45;CL:0000766!1.09e-07!76;CL:0000557!2.34e-07!71;CL:0000542!6.97e-07!53;CL:0000051!6.97e-07!53;CL:0000839!8.61e-07!70;CL:0002057!8.74e-07!42 | |ontology_enrichment_celltype=CL:0000738!2.76e-15!140;CL:0000037!7.28e-14!172;CL:0000566!7.28e-14!172;CL:0000988!8.85e-14!182;CL:0002087!9.54e-13!119;CL:0002032!4.71e-12!165;CL:0000837!4.71e-12!165;CL:0002031!7.37e-12!124;CL:0000860!2.16e-08!45;CL:0000766!1.09e-07!76;CL:0000557!2.34e-07!71;CL:0000542!6.97e-07!53;CL:0000051!6.97e-07!53;CL:0000839!8.61e-07!70;CL:0002057!8.74e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002032;4.27e-34;1!CL:0000557;4.27e-34;1!CL:0002615;2.45e-12;3!CL:0002592;2.45e-12;3!CL:0002188;6.33e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,1.85e-12,3;CL:0002615,3.24e-12,3;CL:0002188,5.73e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.14e-09!102;UBERON:0003061!5.14e-09!102;UBERON:0002371!1.78e-07!80;UBERON:0002193!3.61e-07!112;UBERON:0001474!5.29e-07!86 | |ontology_enrichment_uberon=UBERON:0002390!5.14e-09!102;UBERON:0003061!5.14e-09!102;UBERON:0002371!1.78e-07!80;UBERON:0002193!3.61e-07!112;UBERON:0001474!5.29e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.34e-18;2!UBERON:0005058;8.34e-18;2!UBERON:0009113;8.34e-18;2!UBERON:0003498;2.45e-12;3!UBERON:0005985;2.45e-12;3!UBERON:0001621;2.45e-12;3!UBERON:0004177;6.33e-08;5!UBERON:0005057;6.33e-08;5!UBERON:0003688;8.25e-07;6!UBERON:0002358;8.25e-07;6!UBERON:0003684;8.25e-07;6!UBERON:0001178;8.25e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,1.85e-12,3;UBERON:0002370,1.44e-09,4;UBERON:0005058,1.44e-09,4;UBERON:0009113,1.44e-09,4;UBERON:0003295,1.44e-09,4;UBERON:0005562,1.44e-09,4;UBERON:0003498,5.35e-08,5;UBERON:0005985,5.35e-08,5;UBERON:0003351,8.48e-07,6;UBERON:0003688,9.49e-07,6;UBERON:0002358,9.49e-07,6;UBERON:0003684,9.49e-07,6;UBERON:0001178,9.49e-07,6 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.157421562627358,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,0.0774672005803016,0,0.293600439334847,0,0.601633342410425,0.651032612147555,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.564727018627814,0.272906150057846,0,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0,0,0.290209238628584,0,0,0.502497330513487,0,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0,0.300353785683013,0.16072558669708,0.285012743741249,0,0,0,1.09227722252426,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0,0.334372990781356,0,0,0,0.222820913770347,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0.253019692019503,0.318565414324097,0.651083453856419,0,0,0.255973222308837,0,0,0,0.201606743224732,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0.476981248610684,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0.122988438543114,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0.088048434013226,0,0.288239906833923,0.37872730027914,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.591092280605782,0.431255149719035,0.513372145118994,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0.343143423810856,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,1.58510321173008,0,0,0.243713489631284,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0.106824071127473,0,0.245040215981032,0.185803175125719,0.28853842595289,0.284567373393656,0,0,0,0.423347165447766,0,0,0,0.156679895773023,0,0,0.481764225311099,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0.211125408127993,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0.995261931078505,0,0,0,0,0.104421949505455,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0.126373159256976,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.483781656445426,0.146178634172371,0.246346371159628,0,0,0,0.137041924646751,0,0,0.195551382734803,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0,0,0,0,0.136905378891993,1.27746588066972,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0.492137407573744,0.169346664131569,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0.189403005275089,0.754703705257725,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0.231522474323834,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0.552317850755522,0,0,0.127894371303652,0,0.157265941855896,0.218419276384028,0,0,0.247871528518004,0,0,0.23658523500376,0,0.705351887381368,0,0.0642292250964595,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0.351742488719241,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0.47775168788705,0,0.158013611732727,0,0,0,0,0,0,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0,0.397901550322736,0,0,0.329821550236287,0.150962843566674,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0.0645889098360061,1.11734485732544,0.112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| ||
|short_description=p@chr4:40059575..40059582,- | |short_description=p@chr4:40059575..40059582,- | ||
}} | }} |
Latest revision as of 05:07, 30 July 2015
Short description: | p@chr4:40059575..40059582, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:40059575..40059582, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 1.85e-12 | 3 |
adipocyte of omentum tissue | 3.24e-12 | 3 |
glomerular endothelial cell | 5.73e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 1.85e-12 | 3 |
thymus | 1.44e-09 | 4 |
hemolymphoid system gland | 1.44e-09 | 4 |
thymic region | 1.44e-09 | 4 |
pharyngeal gland | 1.44e-09 | 4 |
thymus primordium | 1.44e-09 | 4 |
heart blood vessel | 5.35e-08 | 5 |
coronary vessel | 5.35e-08 | 5 |
pharyngeal epithelium | 8.48e-07 | 6 |
omentum | 9.49e-07 | 6 |
peritoneum | 9.49e-07 | 6 |
abdominal cavity | 9.49e-07 | 6 |
visceral peritoneum | 9.49e-07 | 6 |