FFCP PHASE1:Hg19::chr8:11313428..11313437,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:11313428..11313437,- to FFCP PHASE1:Hg19::chr8:11313428..11313437,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:11313428..11313437,- | |||
|coexpression_cluster_id=C959 | |||
|description=CAGE_peak_at_chr8:11313428..11313437,- | |||
|id=chr8:11313428..11313437,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.97e-17;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;1.19e-10;1!DOID:17;2.78e-08;5!DOID:450;2.78e-08;5!DOID:66;2.78e-08;5!DOID:423;2.78e-08;5!DOID:0080000;2.78e-08;5!DOID:11722;2.78e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.30e-10,1;DOID:17,3.05e-08,5;DOID:450,3.05e-08,5;DOID:66,3.05e-08,5;DOID:423,3.05e-08,5;DOID:0080000,3.05e-08,5;DOID:11722,3.05e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.29e-15!57;UBERON:0005068!2.29e-15!57;UBERON:0006241!2.29e-15!57;UBERON:0007135!2.29e-15!57;UBERON:0002780!6.59e-13!41;UBERON:0001890!6.59e-13!41;UBERON:0006240!6.59e-13!41;UBERON:0003080!2.11e-12!42;UBERON:0000955!3.73e-12!69;UBERON:0006238!3.73e-12!69;UBERON:0000073!3.97e-12!94;UBERON:0001016!3.97e-12!94;UBERON:0001017!1.65e-11!82;UBERON:0002616!2.53e-11!59;UBERON:0005743!5.21e-11!86;UBERON:0003075!3.71e-10!86;UBERON:0007284!3.71e-10!86;UBERON:0001893!6.63e-10!34;UBERON:0002346!8.85e-10!90;UBERON:0002791!1.94e-09!33;UBERON:0000153!7.12e-09!129;UBERON:0007811!7.12e-09!129;UBERON:0001869!8.03e-09!32;UBERON:0003056!1.33e-08!61;UBERON:0000033!2.10e-08!123;UBERON:0002619!2.17e-08!22;UBERON:0002020!5.48e-08!34;UBERON:0003528!5.48e-08!34;UBERON:0000956!6.57e-07!25;UBERON:0000203!6.57e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;6.49e-21;4!UBERON:0010133;6.49e-21;4!UBERON:0000007;8.57e-19;2!UBERON:0002046;1.97e-17;5!UBERON:0001894;3.27e-12;7!UBERON:0002368;3.98e-09;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,4.95e-21,4;UBERON:0010133,4.95e-21,4;UBERON:0000007,4.53e-19,2;UBERON:0002046,2.08e-17,5;UBERON:0004117,2.08e-17,5;UBERON:0007689,2.08e-17,5;UBERON:0007123,2.08e-17,5;UBERON:0003091,2.08e-17,5;UBERON:0001894,2.81e-12,7;UBERON:0006222,2.81e-12,7;UBERON:0002368,4.90e-09,35;UBERON:0009722,3.36e-08,11;UBERON:0007690,3.36e-08,11;UBERON:0000949,6.39e-07,45 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.229240217243854,0.164201178899891,0.393553906568396,0,0,0,0,0,0,2.09161441566814,0,0,0,0.401088894940283,0,0,0,0,0,0,0,0,0.822335776043652,0.619412741790207,0.28769239232215,0,0,0,0.645484683583826,0,0.376484679085209,0.545812300115692,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,1.76171156811282,0.764546456250458,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0.953962497221368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0.352303495931295,0.161872944368132,0,0,0,0,1.18800285728205,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0,3.94657198515496,0.213557388818567,0.211931901159562,1.20036438433761,0.412210116953756,1.28820270022815,0.18611685633159,0.506328996723799,0.194874010322397,1.51460264546469,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0.0895585227028483,0,0,0.985326475791887,0.792435906119034,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.57191197463259,0,0,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.215627574859517,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,2.83331112147576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0.213425530045242,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0.284136146806413,0,0,0,0,0.422008249231538,0.667852230137435,0.494411622680279,0,0,0,0.755798243562828,1.02268682502155,0.123084805461069,0,0.359473404589307,0.358042349351218,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0.254253650292766,0,0,0,0,1.77148277162768,0.120596438625408,0,0.442317039724898,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0,0,0,0,0,0.296521128680622,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0,0,0,0,0,0,0,0.225980740780532,0.274083849293502,0,0.189932387867636,0,0.240476460754601,0,0,0,0,0.686379991447858,0,0,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,2.38568906942791,0.681017030557878,0,0,0,0,0,0.607495566580247,0,0.236417121897595,0.0524545881349981,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.3755727921195,0.573409195690071,0.110929051536852,0.620964029413834,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.537052785212442,0,0,0,0,0,0,0,0,0.260994291965212,0.453411851024545,0.926089897295336,1.46842022703881,0.71635536432595,0,0.657852148736121,0.176689145945881,0.771656153083659,0,0,0,0.607719912354764,0.414775308455192,0.194860308839388,0,0,0,0,0,0.39997479170986,0,0.172214979660816,0,0,0.139879507719444,0,0,0.646948868380091,0,1.63814457288021,0,0,0.123935764259002,0,0,0.0788617450012534,0,0.352675943690684,0,0.321146125482298,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0.645902582527404,0,0.0981477185010256,0,0.183428598521679,0.115525666150338,0,0,0.198916222116275,0,0,0,0,2.29280684514135,0.443568258651136,0.135075169236789,0.781078098613847,0,0.19024743058172,0.546974809018219,0,0,0,0,0,2.01770233331294,1.82089681270989,1.59363533945908,0,0,0,0.203909198930495,0.197318320688547,0.354581522651905,0,0,0.157115589916002,0,0,0.215927591218621,0,0.0714765441766563,0.316027223465453,0,0,0,0,0,0,0,0.709992004383392,0.681707238073262,0,0,0.31020638566432,0,0,0.098150233615243,0.121917924982269,0,0,0,0.485710993059139,0,11.340194184198,0,0,0.219881033490858,0,0,0,0,0,0,0.196308467114945,1.18818560130834,0.4226557275834,0.169927114687817,0,0.0644578879735772,0.199882311849858,0,0,0.0802413666891683,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,2.41167717140561,0.829169439458779,0.20686599172379,0,0,0.129177819672012,0.31037357147929,2.35476911419288,0.0636471582781649,6.87198442457946,0,0,0.0673520530145875,0.0717222053926763,0,0,0.426909383510862,0,0,0,0,0,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|short_description=p@chr8:11313428..11313437,- | |||
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Latest revision as of 14:05, 31 July 2015
Short description: | p@chr8:11313428..11313437, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:11313428..11313437, - |
Coexpression cluster: | C959_small_thyroid_Smooth_Burkitt_Fibroblast_pineal_papillary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 4.95e-21 | 4 |
neuroendocrine gland | 4.95e-21 | 4 |
pituitary gland | 4.53e-19 | 2 |
thyroid gland | 2.08e-17 | 5 |
pharyngeal pouch | 2.08e-17 | 5 |
thyroid diverticulum | 2.08e-17 | 5 |
pharyngeal pouch 2 | 2.08e-17 | 5 |
thyroid primordium | 2.08e-17 | 5 |
diencephalon | 2.81e-12 | 7 |
future diencephalon | 2.81e-12 | 7 |
endocrine gland | 4.90e-09 | 35 |
entire pharyngeal arch endoderm | 3.36e-08 | 11 |
early pharyngeal endoderm | 3.36e-08 | 11 |
endocrine system | 6.39e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.30e-10 | 1 |
musculoskeletal system disease | 3.05e-08 | 5 |
myotonic disease | 3.05e-08 | 5 |
muscle tissue disease | 3.05e-08 | 5 |
myopathy | 3.05e-08 | 5 |
muscular disease | 3.05e-08 | 5 |
myotonic dystrophy | 3.05e-08 | 5 |