FFCP PHASE1:Hg19::chr8:19936702..19936715,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-100bp_to_ENST00000519197_5end|description=CAGE_peak_3_at_ENST00000519197_5end|id=chr8:19936702..19936715,+|ontology_enrichment_celltype=CL:0002541!3.59e-12!3;CL:0002150!1.07e-10!3;CL:0000861!1.07e-10!3;CL:0000860!4.74e-09!45;CL:0002194!9.80e-07!63;CL:0000576!9.80e-07!63;CL:0000040!9.80e-07!63;CL:0000559!9.80e-07!63|ontology_enrichment_celltype_v019=CL:0000167;2.30e-21;1!CL:0000164;2.30e-21;1!CL:0000502;2.30e-21;1!CL:0000172;2.30e-21;1!CL:0000173;2.30e-21;1!CL:0002541;7.02e-08;3!CL:0002577;7.02e-08;3|ontology_enrichment_celltype_v019_2=CL:0000167,1.88e-21,1;CL:0000164,1.88e-21,1;CL:0000502,1.88e-21,1;CL:0000172,1.88e-21,1;CL:0000173,1.88e-21,1;CL:0002351,1.88e-21,1;CL:0002577,5.93e-08,3;CL:0002541,7.76e-08,3|ontology_enrichment_development_v019=CL:0002351;2.30e-21;1!UBERON:0003124;2.30e-21;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0050619;2.30e-21;1!DOID:1357;2.30e-21;1!DOID:4430;2.30e-21;1!DOID:0050615;6.61e-12;16!DOID:4074;3.52e-11;2!DOID:4905;3.52e-11;2!DOID:3498;3.52e-11;2!DOID:3905;7.57e-10;9!DOID:4556;7.02e-08;3|ontology_enrichment_disease_v019_2=DOID:4430,1.88e-21,1;DOID:0050619,2.82e-21,1;DOID:1357,2.82e-21,1;DOID:0050615,6.99e-12,16;DOID:4074,3.02e-11,2;DOID:4905,3.02e-11,2;DOID:3498,3.02e-11,2;DOID:3905,7.74e-10,9;DOID:4556,7.26e-08,3|ontology_enrichment_uberon=UBERON:0005631!1.93e-20!14;UBERON:0000158!1.93e-20!14;UBERON:0003124!1.21e-19!7;UBERON:0000476!3.59e-12!3;UBERON:0000920!3.59e-12!3;UBERON:0000478!3.40e-11!24;UBERON:0001987!1.47e-09!4;UBERON:0004340!1.47e-09!4;UBERON:0004923!7.95e-07!57|ontology_enrichment_uberon_v019=UBERON:0001764;2.30e-21;1!UBERON:0001825;2.30e-21;1!UBERON:0001987;8.13e-21;4!UBERON:0000478;4.52e-08;24!UBERON:0003124;7.02e-08;3!UBERON:0000920;7.02e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0003124,4.47e-26,7;UBERON:0001764,2.82e-21,1;UBERON:0001825,2.82e-21,1;UBERON:0001987,6.33e-21,4;UBERON:0004340,6.33e-21,4;UBERON:0005631,2.07e-13,14;UBERON:0000158,2.07e-13,14;UBERON:0000478,4.41e-08,24;UBERON:0000920,7.76e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.929119112685311,0,0,0,0,1.29096936716765,0,0,0.545812300115692,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0.31900115973192,0.915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0.453248366080503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,2.51286554000375,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,2.66107110487917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0.11294608203896,0,3.17021971490014,0,0,0.470317296361523,0,2.82811856521951,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0|short_description=p3@ENST00000519197}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-100bp_to_ENST00000519197_5end | |||
|description=CAGE_peak_3_at_ENST00000519197_5end | |||
|id=chr8:19936702..19936715,+ | |||
|ontology_enrichment_celltype=CL:0002541!3.59e-12!3;CL:0002150!1.07e-10!3;CL:0000861!1.07e-10!3;CL:0000860!4.74e-09!45;CL:0002194!9.80e-07!63;CL:0000576!9.80e-07!63;CL:0000040!9.80e-07!63;CL:0000559!9.80e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000167;2.30e-21;1!CL:0000164;2.30e-21;1!CL:0000502;2.30e-21;1!CL:0000172;2.30e-21;1!CL:0000173;2.30e-21;1!CL:0002541;7.02e-08;3!CL:0002577;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.88e-21,1;CL:0000164,1.88e-21,1;CL:0000502,1.88e-21,1;CL:0000172,1.88e-21,1;CL:0000173,1.88e-21,1;CL:0002351,1.88e-21,1;CL:0002577,5.93e-08,3;CL:0002541,7.76e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002351;2.30e-21;1!UBERON:0003124;2.30e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.30e-21;1!DOID:1357;2.30e-21;1!DOID:4430;2.30e-21;1!DOID:0050615;6.61e-12;16!DOID:4074;3.52e-11;2!DOID:4905;3.52e-11;2!DOID:3498;3.52e-11;2!DOID:3905;7.57e-10;9!DOID:4556;7.02e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.88e-21,1;DOID:0050619,2.82e-21,1;DOID:1357,2.82e-21,1;DOID:0050615,6.99e-12,16;DOID:4074,3.02e-11,2;DOID:4905,3.02e-11,2;DOID:3498,3.02e-11,2;DOID:3905,7.74e-10,9;DOID:4556,7.26e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.93e-20!14;UBERON:0000158!1.93e-20!14;UBERON:0003124!1.21e-19!7;UBERON:0000476!3.59e-12!3;UBERON:0000920!3.59e-12!3;UBERON:0000478!3.40e-11!24;UBERON:0001987!1.47e-09!4;UBERON:0004340!1.47e-09!4;UBERON:0004923!7.95e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.30e-21;1!UBERON:0001825;2.30e-21;1!UBERON:0001987;8.13e-21;4!UBERON:0000478;4.52e-08;24!UBERON:0003124;7.02e-08;3!UBERON:0000920;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,4.47e-26,7;UBERON:0001764,2.82e-21,1;UBERON:0001825,2.82e-21,1;UBERON:0001987,6.33e-21,4;UBERON:0004340,6.33e-21,4;UBERON:0005631,2.07e-13,14;UBERON:0000158,2.07e-13,14;UBERON:0000478,4.41e-08,24;UBERON:0000920,7.76e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.929119112685311,0,0,0,0,1.29096936716765,0,0,0.545812300115692,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0.31900115973192,0.915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0.453248366080503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,2.51286554000375,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,2.66107110487917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0.11294608203896,0,3.17021971490014,0,0,0.470317296361523,0,2.82811856521951,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@ENST00000519197 | |||
}} |
Revision as of 04:29, 14 September 2013
Short description: | p3@ENST00000519197 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ENST00000519197_5end |
Coexpression cluster: | NA |
Association with transcript: | -100bp_to_ENST00000519197_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.88e-21 | 1 |
enteroendocrine cell | 1.88e-21 | 1 |
type D enteroendocrine cell | 1.88e-21 | 1 |
somatostatin secreting cell | 1.88e-21 | 1 |
pancreatic D cell | 1.88e-21 | 1 |
progenitor cell of endocrine pancreas | 1.88e-21 | 1 |
placental epithelial cell | 5.93e-08 | 3 |
chorionic membrane mesenchymal stem cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
chorion | 4.47e-26 | 7 |
maxillary sinus | 2.82e-21 | 1 |
paranasal sinus | 2.82e-21 | 1 |
placenta | 6.33e-21 | 4 |
allantois | 6.33e-21 | 4 |
extraembryonic membrane | 2.07e-13 | 14 |
membranous layer | 2.07e-13 | 14 |
extraembryonic structure | 4.41e-08 | 24 |
egg chorion | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.88e-21 | 1 |
paranasal sinus cancer | 2.82e-21 | 1 |
maxillary sinus cancer | 2.82e-21 | 1 |
respiratory system cancer | 6.99e-12 | 16 |
pancreas adenocarcinoma | 3.02e-11 | 2 |
pancreatic carcinoma | 3.02e-11 | 2 |
pancreatic ductal adenocarcinoma | 3.02e-11 | 2 |
lung carcinoma | 7.74e-10 | 9 |
lung large cell carcinoma | 7.26e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.