FFCP PHASE1:Mm9::chr19:5489077..5489091,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:5489077..5489091,- | |||
|description=CAGE_peak_at_chr19:5489077..5489091,- | |description=CAGE_peak_at_chr19:5489077..5489091,- | ||
|id=chr19:5489077..5489091,- | |id=chr19:5489077..5489091,- | ||
|ontology_enrichment_celltype=CL:0000066!7.75e-10!25;CL:0002321!1.01e-08!70;CL:0000220!1.01e-08!70;CL:0000144!2.12e-08!121;CL:0000012!2.12e-08!121;CL:0000548!2.75e-08!115;CL:0000004!2.75e-08!115;CL:0000255!2.75e-08!115;CL:0002371!4.87e-08!118;CL:0002563!2.72e-07!9;CL:0002251!2.72e-07!9;CL:0000223!4.08e-07!20;CL:0002076!6.83e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.14e-14,25;CL:0002321,5.93e-12,70;CL:0002563,3.25e-11,9;CL:0002251,3.25e-11,9;CL:0000223,3.56e-10,20;CL:0002076,1.72e-09,15;CL:0000075,4.79e-09,7;CL:0000723,3.18e-08,91;CL:0000048,3.18e-08,91;CL:0000239,5.94e-08,6;CL:0000677,5.94e-08,6;CL:0000584,5.94e-08,6;CL:0000034,1.48e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!1.92e-08!11;UBERON:0003350!2.72e-07!9;UBERON:0004808!2.72e-07!9;UBERON:0001277!2.72e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000485,3.81e-13,11;UBERON:0003350,3.25e-11,9;UBERON:0004808,3.25e-11,9;UBERON:0001277,3.25e-11,9;UBERON:0000490,7.59e-08,66;UBERON:0001242,7.38e-07,13;UBERON:0001262,7.38e-07,13;UBERON:0004786,7.38e-07,13 | |||
|phase1_expression=3.04282809499109,10.1202868215415,6.82498859084304,12.0985684522732,8.5152274090879,6.71517087647559,6.77476657727024,0.387369970324729,0.563154888606667,1.17032263160997,3.93801326918661,1.7549874978974,0.513602189793617,0.437102012094987,0,0.202475267389826,0,0.946386496074713,0,0.42438965179803,2.55129870453209,1.98581902401771,1.56719873483361,0.319984845586813,0.22940928106717,3.44539178469012,3.87685796543167,3.44753972297422,0,0,0.221730510655305,8.89042942843484,2.46025915033828,15.8481681015439,21.9527231010969,3.82339684324532,36.1379760584393,0.418531630736908,1.5626706890476,0,7.64700934440319,1.36609096991689,0,2.39203954153597,4.46058497365864,0.367093504323363,3.12956537739216,0.65407546914134,1.31811709640683,0.194429899074283,0.839918529752175,1.43752564364972,0.167782606057736,0,0,0.514518872071894,2.0057340795713,1.54701627683233,0.404632921719196,1.05798195854407,0.633831403506179,3.38844532069132,0,0.449949858640699,0,0,2.99600110518405,5.37905627450176,0.829516898467821,0.540023753326763,0.630974884054146,0.285650984403804,0,1.5923803897944,0.575072826109418,0,0,0.127687338085188,0,0.527545150920775,0.182975287204819,0.52091337055676,0.279182999001381,0.56276261003168,0.61119299110724,1.47314292736834,0.284743361598206,0.372798891650601,0.605809546665472,1.43585964202892,22.6094301187309,3.44169550792555,5.439770669662,1.07940638327563,0.649776417447669,0,0.842666520790511,3.06774580640504,3.11743205523443,2.47337702157238,9.57735254481427,2.56652954828636,2.54805239706646,0,0.865964164044856,0.760079596425296,1.01104889002957,0.34255163915718,0.517875767294343,0.445326417194474,0.346970653532272,0.608930956624282,0.230615497256059,1.05505848386836,0.587943535678524,0.251333182659351,0.988779870937496,0.289198713839823,1.76922110389975,0.647067399789637,0.220841518460394,1.45462575940567,0,0.878342391034642,1.04723353406728,0.255457055208591,1.91704199209472,1.19980546198682,0.127070227073065,0.599162557619291,0,0.879580464790051,0.347648640384553,0.255715457330331,0.20778804455956,0.486723789203273,0.203678727700633,0.248813941220186,0.252722758433675,0,0.260240885925407,1.14951052216736,0.720248519221397,1.35634336052144,0.612328492361951,0.768682321709099,0.374806898238915,0.258703370739016,3.01795190105979,0.945530400839096,0.703804496655795,0.219195732427575,1.39023624612799,1.39300866608867,1.02891068203972,0.59710280045548,0,0.257347907114715,0.284163499395593,0.207125772535502,0.234526059981096,0.720248245844059,0.473489471170421,0.196764231747404,0.154267112887378,0.697601834251224,0.268273401399619,0.116765342367169,0.329119699826961,0.492502392237286,0.162137619091711,0.877199924551994,0.439100230582101,0,0,0.205809224758569,0.330418782983798,0.264450566663544,0.213288250535234,0.696710015581316,0.38660238396628,0,0.667134131534611,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0,0,0,0.398282546508734,1.70701110857774,0.799739588268102,0,0.610953983535943,0.775809948670503,0.420814919341911,0.316182685621286,0.295220295959204,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0.224862112384854,0,0,0,0.575392274901621,0.162135226775035,0,0,0,0,0.252578877947112,0,0.482443521363367,0.554259570499814,0.189491411770485,0.488894929326078,0.848725428875941,0.469380496577004,1.00503754465089,0.952174563544055,0.585400943573396,0.472905432318573,0,0.637819074629948,0.655453258862952,0.518054945597687,1.01254341007058,0,1.63171705145613,0.491764273019036,0,0.642202359951168,0.703270119553219,0.655739781506702,0.252470927204373,1.57754109708128,1.95219372148319,2.36965737506079,2.62865677747807,3.34198011123591,3.96307143104365,1.61924280669958,0.292255857911312,2.37172666767914,0.963963949265421,0.709700426041343,0.712262414669021,0.488660878060728,1.64970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,1.09060118843252,0.712994756769443,0,0,0,2.04263763452273,1.44048875225048,1.16422815404479,1.07168517515796,0.354680467284547,0.713475270408282,2.30368628842969,0.608929898229199,0.23467170806371,0.21183207086382,0,1.31909002353184,0,0.663442174209714,0.477489376012546,0.164140899745061,0.291480836629851,0.370850604021019,0.512612642393558,0.619160603889667,0.740778109478847,0.188368457004691,0.410082683163076,0.457556346413045,0.509935289981566,1.39951452323658,0.829199842826543,0,0.949007980743406,0.813277868507395,0.756037385752609,0.418176592028937,0.87345025498471,0.269728692769641,0.0826534557253359,0,0.777689839750757,0,12.4012446510522,0.448549638131936,0.992750942742586,1.16670713006429,0.774958940866387,1.68956125490778,1.17357238645754,0.781226309063701,0.524296722128554,0.724752362478018,5.47257011889944,1.26404448251271,0.608175645870493,0.308132871494482,0.51968329191118,0.895133478337407,1.19208812868759,1.08175904567972,1.03382669022204,1.71642964911851,0.914481679859998,0.705783295957884,0.974578807397524,1.25075394132428,3.15567635890236,0.226730383615211,0.887943813496259,0.62799699626633,0.167884616364078,0.5795687820965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| |phase1_expression=3.04282809499109,10.1202868215415,6.82498859084304,12.0985684522732,8.5152274090879,6.71517087647559,6.77476657727024,0.387369970324729,0.563154888606667,1.17032263160997,3.93801326918661,1.7549874978974,0.513602189793617,0.437102012094987,0,0.202475267389826,0,0.946386496074713,0,0.42438965179803,2.55129870453209,1.98581902401771,1.56719873483361,0.319984845586813,0.22940928106717,3.44539178469012,3.87685796543167,3.44753972297422,0,0,0.221730510655305,8.89042942843484,2.46025915033828,15.8481681015439,21.9527231010969,3.82339684324532,36.1379760584393,0.418531630736908,1.5626706890476,0,7.64700934440319,1.36609096991689,0,2.39203954153597,4.46058497365864,0.367093504323363,3.12956537739216,0.65407546914134,1.31811709640683,0.194429899074283,0.839918529752175,1.43752564364972,0.167782606057736,0,0,0.514518872071894,2.0057340795713,1.54701627683233,0.404632921719196,1.05798195854407,0.633831403506179,3.38844532069132,0,0.449949858640699,0,0,2.99600110518405,5.37905627450176,0.829516898467821,0.540023753326763,0.630974884054146,0.285650984403804,0,1.5923803897944,0.575072826109418,0,0,0.127687338085188,0,0.527545150920775,0.182975287204819,0.52091337055676,0.279182999001381,0.56276261003168,0.61119299110724,1.47314292736834,0.284743361598206,0.372798891650601,0.605809546665472,1.43585964202892,22.6094301187309,3.44169550792555,5.439770669662,1.07940638327563,0.649776417447669,0,0.842666520790511,3.06774580640504,3.11743205523443,2.47337702157238,9.57735254481427,2.56652954828636,2.54805239706646,0,0.865964164044856,0.760079596425296,1.01104889002957,0.34255163915718,0.517875767294343,0.445326417194474,0.346970653532272,0.608930956624282,0.230615497256059,1.05505848386836,0.587943535678524,0.251333182659351,0.988779870937496,0.289198713839823,1.76922110389975,0.647067399789637,0.220841518460394,1.45462575940567,0,0.878342391034642,1.04723353406728,0.255457055208591,1.91704199209472,1.19980546198682,0.127070227073065,0.599162557619291,0,0.879580464790051,0.347648640384553,0.255715457330331,0.20778804455956,0.486723789203273,0.203678727700633,0.248813941220186,0.252722758433675,0,0.260240885925407,1.14951052216736,0.720248519221397,1.35634336052144,0.612328492361951,0.768682321709099,0.374806898238915,0.258703370739016,3.01795190105979,0.945530400839096,0.703804496655795,0.219195732427575,1.39023624612799,1.39300866608867,1.02891068203972,0.59710280045548,0,0.257347907114715,0.284163499395593,0.207125772535502,0.234526059981096,0.720248245844059,0.473489471170421,0.196764231747404,0.154267112887378,0.697601834251224,0.268273401399619,0.116765342367169,0.329119699826961,0.492502392237286,0.162137619091711,0.877199924551994,0.439100230582101,0,0,0.205809224758569,0.330418782983798,0.264450566663544,0.213288250535234,0.696710015581316,0.38660238396628,0,0.667134131534611,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0,0,0,0.398282546508734,1.70701110857774,0.799739588268102,0,0.610953983535943,0.775809948670503,0.420814919341911,0.316182685621286,0.295220295959204,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0.224862112384854,0,0,0,0.575392274901621,0.162135226775035,0,0,0,0,0.252578877947112,0,0.482443521363367,0.554259570499814,0.189491411770485,0.488894929326078,0.848725428875941,0.469380496577004,1.00503754465089,0.952174563544055,0.585400943573396,0.472905432318573,0,0.637819074629948,0.655453258862952,0.518054945597687,1.01254341007058,0,1.63171705145613,0.491764273019036,0,0.642202359951168,0.703270119553219,0.655739781506702,0.252470927204373,1.57754109708128,1.95219372148319,2.36965737506079,2.62865677747807,3.34198011123591,3.96307143104365,1.61924280669958,0.292255857911312,2.37172666767914,0.963963949265421,0.709700426041343,0.712262414669021,0.488660878060728,1.64970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,1.09060118843252,0.712994756769443,0,0,0,2.04263763452273,1.44048875225048,1.16422815404479,1.07168517515796,0.354680467284547,0.713475270408282,2.30368628842969,0.608929898229199,0.23467170806371,0.21183207086382,0,1.31909002353184,0,0.663442174209714,0.477489376012546,0.164140899745061,0.291480836629851,0.370850604021019,0.512612642393558,0.619160603889667,0.740778109478847,0.188368457004691,0.410082683163076,0.457556346413045,0.509935289981566,1.39951452323658,0.829199842826543,0,0.949007980743406,0.813277868507395,0.756037385752609,0.418176592028937,0.87345025498471,0.269728692769641,0.0826534557253359,0,0.777689839750757,0,12.4012446510522,0.448549638131936,0.992750942742586,1.16670713006429,0.774958940866387,1.68956125490778,1.17357238645754,0.781226309063701,0.524296722128554,0.724752362478018,5.47257011889944,1.26404448251271,0.608175645870493,0.308132871494482,0.51968329191118,0.895133478337407,1.19208812868759,1.08175904567972,1.03382669022204,1.71642964911851,0.914481679859998,0.705783295957884,0.974578807397524,1.25075394132428,3.15567635890236,0.226730383615211,0.887943813496259,0.62799699626633,0.167884616364078,0.5795687820965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| ||
|short_description=p@chr19:5489077..5489091,- | |short_description=p@chr19:5489077..5489091,- | ||
}} | }} |
Latest revision as of 08:28, 4 August 2015
Short description: | p@chr19:5489077..5489091, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:5489077..5489091, - |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.14e-14 | 25 |
embryonic cell | 5.93e-12 | 70 |
intestinal epithelial cell | 3.25e-11 | 9 |
epithelial cell of alimentary canal | 3.25e-11 | 9 |
endodermal cell | 3.56e-10 | 20 |
endo-epithelial cell | 1.72e-09 | 15 |
columnar/cuboidal epithelial cell | 4.79e-09 | 7 |
somatic stem cell | 3.18e-08 | 91 |
multi fate stem cell | 3.18e-08 | 91 |
brush border epithelial cell | 5.94e-08 | 6 |
gut absorptive cell | 5.94e-08 | 6 |
enterocyte | 5.94e-08 | 6 |
stem cell | 1.48e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
simple columnar epithelium | 3.81e-13 | 11 |
epithelium of mucosa | 3.25e-11 | 9 |
gastrointestinal system epithelium | 3.25e-11 | 9 |
intestinal epithelium | 3.25e-11 | 9 |
unilaminar epithelium | 7.59e-08 | 66 |
intestinal mucosa | 7.38e-07 | 13 |
wall of intestine | 7.38e-07 | 13 |
gastrointestinal system mucosa | 7.38e-07 | 13 |