FFCP PHASE1:Mm9::chr1:132748380..132748400,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=430|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:132748380..132748400,-|id=chr1:132748380..132748400,-|ontology_enrichment_celltype=CL:0000223!9.41e-09!20;CL:0002563!3.15e-08!9;CL:0002251!3.15e-08!9;CL:0000066!8.77e-08!25;CL:0000181!5.66e-07!5;CL:0000417!5.66e-07!5;CL:0000668!5.66e-07!5;CL:0000412!5.66e-07!5;CL:0000182!5.66e-07!5|ontology_enrichment_celltype_v019_2=CL:0000182,1.00e-11,5;CL:0000223,2.36e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.01e-15!43;UBERON:0000344!2.01e-14!15;UBERON:0001007!3.84e-14!128;UBERON:0001555!3.84e-14!128;UBERON:0007026!3.84e-14!128;UBERON:0004119!9.09e-14!130;UBERON:0000925!9.09e-14!130;UBERON:0006595!9.09e-14!130;UBERON:0005409!1.00e-12!59;UBERON:0004921!1.87e-12!126;UBERON:0004185!1.87e-12!126;UBERON:0001242!1.53e-11!13;UBERON:0000060!1.53e-11!13;UBERON:0001262!1.53e-11!13;UBERON:0004786!1.53e-11!13;UBERON:0007023!4.03e-09!51;UBERON:0003350!3.15e-08!9;UBERON:0004808!3.15e-08!9;UBERON:0001277!3.15e-08!9;UBERON:0004923!5.77e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.67e-16,31;UBERON:0005409,2.22e-11,47;UBERON:0001007,2.74e-11,116;UBERON:0001555,2.74e-11,116;UBERON:0007026,2.74e-11,116;UBERON:0004119,5.05e-11,118;UBERON:0000925,5.05e-11,118;UBERON:0006595,5.05e-11,118;UBERON:0002365,1.15e-09,25;UBERON:0002330,1.15e-09,25;UBERON:0000344,1.38e-09,15;UBERON:0004921,3.07e-09,114;UBERON:0001911,2.64e-07,2;UBERON:0000076,2.64e-07,2;UBERON:0005333,2.64e-07,2;UBERON:0008425,2.64e-07,2;UBERON:0005311,2.64e-07,2;UBERON:0001962,3.82e-07,2;UBERON:0001961,3.82e-07,2;UBERON:0001744,3.82e-07,2|phase1_expression=0,1.04692622291808,0.454999239389536,2.11724947914781,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,3.03985603307473,1.60586496747019,0,0.430761996159075,0,3.42042155021473,0,0.443461021310609,0,0,0,1.1554064790051,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.439770669662,10.2543606411185,11.0461990966104,7.16843019355737,0.983110940922263,0,0,0,0,0,0,0,0,0,0,3.08296475241462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0501380364725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5471701023357,6.87571473325215,0,0,0,0.201683524623343,0,0.190225626112559,8.0669940462567,0.494096864172033,1.50801125280162,0,0.974820435595601,14.3811105384675,5.40345124686736,5.77509692437665,0,0,0,0,0,0,0,0,0,0,5.63259991465583,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,4.3419916922703,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44234991113325,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,6.73997861117323,3.72803587852155,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.563047426353546,2.01466786693992,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:132748380..132748400,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=430 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:132748380..132748400,- | |||
|description=CAGE_peak_at_chr1:132748380..132748400,- | |||
|id=chr1:132748380..132748400,- | |||
|ontology_enrichment_celltype=CL:0000223!9.41e-09!20;CL:0002563!3.15e-08!9;CL:0002251!3.15e-08!9;CL:0000066!8.77e-08!25;CL:0000181!5.66e-07!5;CL:0000417!5.66e-07!5;CL:0000668!5.66e-07!5;CL:0000412!5.66e-07!5;CL:0000182!5.66e-07!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.00e-11,5;CL:0000223,2.36e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.01e-15!43;UBERON:0000344!2.01e-14!15;UBERON:0001007!3.84e-14!128;UBERON:0001555!3.84e-14!128;UBERON:0007026!3.84e-14!128;UBERON:0004119!9.09e-14!130;UBERON:0000925!9.09e-14!130;UBERON:0006595!9.09e-14!130;UBERON:0005409!1.00e-12!59;UBERON:0004921!1.87e-12!126;UBERON:0004185!1.87e-12!126;UBERON:0001242!1.53e-11!13;UBERON:0000060!1.53e-11!13;UBERON:0001262!1.53e-11!13;UBERON:0004786!1.53e-11!13;UBERON:0007023!4.03e-09!51;UBERON:0003350!3.15e-08!9;UBERON:0004808!3.15e-08!9;UBERON:0001277!3.15e-08!9;UBERON:0004923!5.77e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.67e-16,31;UBERON:0005409,2.22e-11,47;UBERON:0001007,2.74e-11,116;UBERON:0001555,2.74e-11,116;UBERON:0007026,2.74e-11,116;UBERON:0004119,5.05e-11,118;UBERON:0000925,5.05e-11,118;UBERON:0006595,5.05e-11,118;UBERON:0002365,1.15e-09,25;UBERON:0002330,1.15e-09,25;UBERON:0000344,1.38e-09,15;UBERON:0004921,3.07e-09,114;UBERON:0001911,2.64e-07,2;UBERON:0000076,2.64e-07,2;UBERON:0005333,2.64e-07,2;UBERON:0008425,2.64e-07,2;UBERON:0005311,2.64e-07,2;UBERON:0001962,3.82e-07,2;UBERON:0001961,3.82e-07,2;UBERON:0001744,3.82e-07,2 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,2.11724947914781,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,3.03985603307473,1.60586496747019,0,0.430761996159075,0,3.42042155021473,0,0.443461021310609,0,0,0,1.1554064790051,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.439770669662,10.2543606411185,11.0461990966104,7.16843019355737,0.983110940922263,0,0,0,0,0,0,0,0,0,0,3.08296475241462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0501380364725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5471701023357,6.87571473325215,0,0,0,0.201683524623343,0,0.190225626112559,8.0669940462567,0.494096864172033,1.50801125280162,0,0.974820435595601,14.3811105384675,5.40345124686736,5.77509692437665,0,0,0,0,0,0,0,0,0,0,5.63259991465583,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,4.3419916922703,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44234991113325,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,6.73997861117323,3.72803587852155,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.563047426353546,2.01466786693992,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:132748380..132748400,- | |||
}} |
Latest revision as of 17:57, 4 August 2015
Short description: | p@chr1:132748380..132748400, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:132748380..132748400, - |
Coexpression cluster: | MCL_coexpression_mm9:430 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.00e-11 | 5 |
endodermal cell | 2.36e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.67e-16 | 31 |
gastrointestinal system | 2.22e-11 | 47 |
digestive system | 2.74e-11 | 116 |
digestive tract | 2.74e-11 | 116 |
primitive gut | 2.74e-11 | 116 |
endoderm-derived structure | 5.05e-11 | 118 |
endoderm | 5.05e-11 | 118 |
presumptive endoderm | 5.05e-11 | 118 |
exocrine gland | 1.15e-09 | 25 |
exocrine system | 1.15e-09 | 25 |
mucosa | 1.38e-09 | 15 |
subdivision of digestive tract | 3.07e-09 | 114 |
mammary gland | 2.64e-07 | 2 |
external ectoderm | 2.64e-07 | 2 |
mammary bud | 2.64e-07 | 2 |
mammary ridge | 2.64e-07 | 2 |
mammary placode | 2.64e-07 | 2 |
gut-associated lymphoid tissue | 3.82e-07 | 2 |
mucosa-associated lymphoid tissue | 3.82e-07 | 2 |
lymphoid tissue | 3.82e-07 | 2 |