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UBERON:0000016: Difference between revisions

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|subset=organ_slim;;uberon_slim;;vertebrate_core
|subset=organ_slim;;uberon_slim;;vertebrate_core
|derives_from=
|derives_from=
|develops_from=
|develops_from=UBERON:0003923
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=
|part_of=UBERON:0001264
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "The zebrafish endocrine pancreas is composed of small groups of islet cells that are distributed throughout the exocrine pancreas. The islet cells produce insulin, glucagon and somatostatin.[TAO]" xsd:string
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "The zebrafish endocrine pancreas is composed of small groups of islet cells that are distributed throughout the exocrine pancreas. The islet cells produce insulin, glucagon and somatostatin.[TAO]" xsd:string
|is_obsolete=
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}}

Revision as of 13:24, 27 June 2012

Name:endocrine pancreas
Definition:"The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin[GO]." [GOC:GO, Wikipedia:Islets_of_Langerhans]
Xrefs:
links:

BTO:0000650
EV:0100129
FMA:16018
MA:0001582
MESH:A.03.734.414
ncithesaurus:Endocrine_Pancreas
SCTID:361339003
TAO:0001260
VHOG:0000049

ZFA:0001260
Synonyms: "endocrine pancreas" EXACT []
"endocrine part of pancreas" RELATED [BTO:0000650]
"islets of Langerhans" RELATED []
"pars endocrina pancreatis" EXACT []
Comments:Editor notes - endocrine and exocrine pancrease are no co-associated in hagfishes or lampreys [PMID:20959416] - create a separate class for these?
Subset: organ_slim
uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0002075(viscus),UBERON:0004119(endoderm-derived structure)
develops_from:UBERON:0003923(dorsal pancreatic bud)
part_of:UBERON:0001264(pancreas)



Children

part of:UBERON:0000006 (islet of Langerhans)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000016 (endocrine pancreas), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results










Property "Property value" (as page type) with input value "UBPROP:0000001 "The zebrafish endocrine pancreas is composed of small groups of islet cells that are distributed throughout the exocrine pancreas. The islet cells produce insulin, glucagon and somatostatin.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.