Personal tools

UBERON:0003067

From FANTOM5_SSTAR

Revision as of 17:36, 12 September 2014 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:dorsolateral placode
Namespace:FANTOM
Definition:"Lateral neurogenic placodes positioned dorsal of the epibranchial placodes." [ZFIN:curator]
Xrefs:
links:

TAO:0001310
VHOG:0000103
XAO:0000187

ZFA:0001310
Synonyms: "dorsolateral placodes" EXACT PLURAL [ZFA:0001310]
Alt_id: UBERON:XAO_0000187-ZFA_0001310

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0009955(neurogenic placode)



Children

is a:UBERON:0003069 (otic placode)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003067 (dorsolateral placode), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_6f69956b8073250c371333dfea6820cep1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr14:47293496..47293510,-#_6f69956b8073250c371333dfea6820cep@chr14:47293496..47293510, -
1.87e-86FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_6f69956b8073250c371333dfea6820cep2@9230102O04Rik
1.87e-86FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_6f69956b8073250c371333dfea6820cep@chr14:102297728..102297742, +
1.87e-86FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_6f69956b8073250c371333dfea6820cep@chr9:50968647..50968668, -
1.87e-86FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_6f69956b8073250c371333dfea6820cep@chr11:8405038..8405048, -
1.87e-86FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_6f69956b8073250c371333dfea6820cep4@Chrna10
1.87e-86FFCP PHASE1:Mm9::chr14:20649897..20649907,+#_6f69956b8073250c371333dfea6820cep@chr14:20649897..20649907, +
1.87e-86FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_6f69956b8073250c371333dfea6820cep9@Ankrd24
1.87e-86FFCP PHASE1:Mm9::chr18:81327205..81327211,+#_6f69956b8073250c371333dfea6820cep@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_6f69956b8073250c371333dfea6820cep3@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_6f69956b8073250c371333dfea6820cep11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_6f69956b8073250c371333dfea6820cep@chr8:13414266..13414279, +
1.87e-86FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_6f69956b8073250c371333dfea6820cep@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_6f69956b8073250c371333dfea6820cep@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr7:109052262..109052291,-#_6f69956b8073250c371333dfea6820cep1@Tomt
1.87e-86FFCP PHASE2:Mm9::chr5:30710403..30710406,-#_6f69956b8073250c371333dfea6820cep10@Otof
1.87e-86FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_6f69956b8073250c371333dfea6820cep1@Kncn
1.87e-86FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_6f69956b8073250c371333dfea6820cep7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_6f69956b8073250c371333dfea6820cep@chr8:13414289..13414295, +
1.87e-86FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_6f69956b8073250c371333dfea6820cep@chr9:66860888..66860899, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_6f69956b8073250c371333dfea6820cep@chr2:53464178..53464186, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_6f69956b8073250c371333dfea6820cep11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_6f69956b8073250c371333dfea6820cep@chr2:73232344..73232356, -
1.87e-86FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_6f69956b8073250c371333dfea6820cep2@Espnl
1.87e-86FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_6f69956b8073250c371333dfea6820cep10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr10:107156949..107156956,-#_6f69956b8073250c371333dfea6820cep3@Ptprq
1.87e-86FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_6f69956b8073250c371333dfea6820cep@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_6f69956b8073250c371333dfea6820cep@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_6f69956b8073250c371333dfea6820cep@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_6f69956b8073250c371333dfea6820cep@chr16:93971357..93971363, -
1.87e-86FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_6f69956b8073250c371333dfea6820cep@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_6f69956b8073250c371333dfea6820cep@chr2:170417150..170417155, -
1.87e-86FFCP PHASE2:Mm9::chr10:97109753..97109764,+#_6f69956b8073250c371333dfea6820cep3@Epyc
1.87e-86FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_6f69956b8073250c371333dfea6820cep3@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_6f69956b8073250c371333dfea6820cep11@Tsga14
1.87e-86FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_6f69956b8073250c371333dfea6820cep@chr6:113251570..113251578, +
1.87e-86FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_6f69956b8073250c371333dfea6820cep@chr15:65641741..65641748, +
1.87e-86FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_6f69956b8073250c371333dfea6820cep15@Mctp1
1.87e-86FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_6f69956b8073250c371333dfea6820cep41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_6f69956b8073250c371333dfea6820cep2@Slc26a5
1.87e-86FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_6f69956b8073250c371333dfea6820cep@chr2:73232344..73232356, -
1.87e-86FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_6f69956b8073250c371333dfea6820cep@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_6f69956b8073250c371333dfea6820cep@chr7:139597684..139597691, +
1.87e-86FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_6f69956b8073250c371333dfea6820cep1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_6f69956b8073250c371333dfea6820cep@chr17:13983179..13983190, +
1.87e-86FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_6f69956b8073250c371333dfea6820cep@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_6f69956b8073250c371333dfea6820cep@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_6f69956b8073250c371333dfea6820cep3@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_6f69956b8073250c371333dfea6820cep3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_6f69956b8073250c371333dfea6820cep@chr5:144115382..144115389, +
1.87e-86FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_6f69956b8073250c371333dfea6820cep3@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_6f69956b8073250c371333dfea6820cep1@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_6f69956b8073250c371333dfea6820cep@chr5:72652660..72652667, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_6f69956b8073250c371333dfea6820cep@chr16:93971367..93971379, -
1.87e-86FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_6f69956b8073250c371333dfea6820cep@chr17:13983198..13983203, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_6f69956b8073250c371333dfea6820cep3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_6f69956b8073250c371333dfea6820cep1@Otog
1.87e-86FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_6f69956b8073250c371333dfea6820cep@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_6f69956b8073250c371333dfea6820cep@chr9:42207375..42207384, -
1.87e-86FFCP PHASE2:Mm9::chr19:55256373..55256384,+#_6f69956b8073250c371333dfea6820cep@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_6f69956b8073250c371333dfea6820cep2@Strc
1.87e-86FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_6f69956b8073250c371333dfea6820cep2@Otogl
1.87e-86FFCP PHASE2:Mm9::chr1:60561636..60561645,-#_6f69956b8073250c371333dfea6820cep@chr1:60561636..60561645, -
1.87e-86FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_6f69956b8073250c371333dfea6820cep@chr15:89215333..89215341, +
1.87e-86FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_6f69956b8073250c371333dfea6820cep@chr7:133957514..133957529, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_6f69956b8073250c371333dfea6820cep@chr1:172843813..172843834, -
1.87e-86FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_6f69956b8073250c371333dfea6820cep@chr5:144115382..144115389, +
1.87e-86FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_6f69956b8073250c371333dfea6820cep9@Otof
1.87e-86FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_6f69956b8073250c371333dfea6820cep@chr13:58283583..58283607, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_6f69956b8073250c371333dfea6820cep@chr9:42207375..42207384, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_6f69956b8073250c371333dfea6820cep1@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr1:93235253..93235264,+#_6f69956b8073250c371333dfea6820cep@chr1:93235253..93235264, +
1.87e-86FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_6f69956b8073250c371333dfea6820cep4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_6f69956b8073250c371333dfea6820cep@chr11:4689837..4689845, -
1.87e-86FFCP PHASE2:Mm9::chr8:94180607..94180619,-#_6f69956b8073250c371333dfea6820cep@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_6f69956b8073250c371333dfea6820cep3@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_6f69956b8073250c371333dfea6820cep@chr3:154459231..154459240, +
1.87e-86FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_6f69956b8073250c371333dfea6820cep4@uc007rhb.1
1.87e-86FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_6f69956b8073250c371333dfea6820cep@chr11:75421384..75421397, +
1.87e-86FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_6f69956b8073250c371333dfea6820cep@chr1:182528371..182528385, +
1.87e-86FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_6f69956b8073250c371333dfea6820cep@chr7:141605556..141605563, -
1.87e-86FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_6f69956b8073250c371333dfea6820cep7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_6f69956b8073250c371333dfea6820cep@chr14:102297747..102297765, +
1.87e-86FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_6f69956b8073250c371333dfea6820cep@chr17:27252925..27252939, +
1.87e-86FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_6f69956b8073250c371333dfea6820cep@chr7:141605556..141605563, -
1.87e-86FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_6f69956b8073250c371333dfea6820cep@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_6f69956b8073250c371333dfea6820cep@chr12:13572961..13572974, +
1.87e-86FFCP PHASE1:Mm9::chr19:22767090..22767099,+#_6f69956b8073250c371333dfea6820cep18@Trpm3
1.87e-86FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_6f69956b8073250c371333dfea6820cep@chr13:48087761..48087775, -
1.87e-86FFCP PHASE2:Mm9::chr14:102297747..102297765,+#_6f69956b8073250c371333dfea6820cep@chr14:102297747..102297765, +
1.87e-86FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_6f69956b8073250c371333dfea6820cep@chr11:4689776..4689785, -
1.87e-86FFCP PHASE2:Mm9::chr15:65641741..65641748,+#_6f69956b8073250c371333dfea6820cep@chr15:65641741..65641748, +
1.87e-86FFCP PHASE2:Mm9::chr7:139597684..139597691,+#_6f69956b8073250c371333dfea6820cep@chr7:139597684..139597691, +
1.87e-86FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_6f69956b8073250c371333dfea6820cep41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_6f69956b8073250c371333dfea6820cep6@Jag1
1.87e-86FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_6f69956b8073250c371333dfea6820cep@chr18:38104702..38104718, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_6f69956b8073250c371333dfea6820cep2@Otof
1.87e-86FFCP PHASE2:Mm9::chr13:37195838..37195870,-#_6f69956b8073250c371333dfea6820cep@chr13:37195838..37195870, -
1.87e-86FFCP PHASE2:Mm9::chr15:103146966..103146971,-#_6f69956b8073250c371333dfea6820cep@chr15:103146966..103146971, -