Personal tools

UBERON:0003067

From FANTOM5_SSTAR

Revision as of 17:36, 12 September 2014 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:dorsolateral placode
Namespace:FANTOM
Definition:"Lateral neurogenic placodes positioned dorsal of the epibranchial placodes." [ZFIN:curator]
Xrefs:
links:

TAO:0001310
VHOG:0000103
XAO:0000187

ZFA:0001310
Synonyms: "dorsolateral placodes" EXACT PLURAL [ZFA:0001310]
Alt_id: UBERON:XAO_0000187-ZFA_0001310

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0009955(neurogenic placode)



Children

is a:UBERON:0003069 (otic placode)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003067 (dorsolateral placode), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_6f69956b8073250c371333dfea6820cep2@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_6f69956b8073250c371333dfea6820cep@chr14:47293496..47293510, -
1.87e-86FFCP PHASE1:Mm9::chr9:42208142..42208157,-#_6f69956b8073250c371333dfea6820cep10@Tecta
1.87e-86FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_6f69956b8073250c371333dfea6820cep@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_6f69956b8073250c371333dfea6820cep5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_6f69956b8073250c371333dfea6820cep7@Tecta
1.87e-86FFCP PHASE1:Mm9::chr13:76964459..76964469,+#_6f69956b8073250c371333dfea6820cep15@Mctp1
1.87e-86FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_6f69956b8073250c371333dfea6820cep@chr3:58626291..58626298, -
1.87e-86FFCP PHASE1:Mm9::chr10:107156949..107156956,-#_6f69956b8073250c371333dfea6820cep3@Ptprq
1.87e-86FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_6f69956b8073250c371333dfea6820cep@chr7:133957514..133957529, +
1.87e-86FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_6f69956b8073250c371333dfea6820cep@chr4:63079735..63079745, -
1.87e-86FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_6f69956b8073250c371333dfea6820cep@chr5:147854240..147854249, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_6f69956b8073250c371333dfea6820cep3@Otogl
1.87e-86FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_6f69956b8073250c371333dfea6820cep@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_6f69956b8073250c371333dfea6820cep@chr5:72652660..72652667, +
1.87e-86FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_6f69956b8073250c371333dfea6820cep@chr11:89702580..89702593, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207777..42207789,-#_6f69956b8073250c371333dfea6820cep7@Tecta
1.87e-86FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_6f69956b8073250c371333dfea6820cep6@Jag1
1.87e-86FFCP PHASE1:Mm9::chr19:4140290..4140321,+#_6f69956b8073250c371333dfea6820cep2@Gpr152
1.87e-86FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_6f69956b8073250c371333dfea6820cep@chr11:114603036..114603048, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_6f69956b8073250c371333dfea6820cep@chr16:93971325..93971337, -
1.87e-86FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_6f69956b8073250c371333dfea6820cep7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_6f69956b8073250c371333dfea6820cep@chr5:3909310..3909321, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_6f69956b8073250c371333dfea6820cep3@Kncn
1.87e-86FFCP PHASE1:Mm9::chr16:45693840..45693856,-#_6f69956b8073250c371333dfea6820cep1@Tmprss7
1.87e-86FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_6f69956b8073250c371333dfea6820cep@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_6f69956b8073250c371333dfea6820cep@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_6f69956b8073250c371333dfea6820cep6@Fam70b
1.87e-86FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_6f69956b8073250c371333dfea6820cep2@Strc
1.87e-86FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_6f69956b8073250c371333dfea6820cep@chr17:27252925..27252939, +
1.87e-86FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_6f69956b8073250c371333dfea6820cep9@Ankrd24
1.87e-86FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_6f69956b8073250c371333dfea6820cep@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_6f69956b8073250c371333dfea6820cep1@Otog
1.87e-86FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_6f69956b8073250c371333dfea6820cep@chr5:3909310..3909321, +
1.87e-86FFCP PHASE2:Mm9::chr14:31283072..31283081,-#_6f69956b8073250c371333dfea6820cep@chr14:31283072..31283081, -
1.87e-86FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_6f69956b8073250c371333dfea6820cep@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr11:75421384..75421397,+#_6f69956b8073250c371333dfea6820cep@chr11:75421384..75421397, +
1.87e-86FFCP PHASE1:Mm9::chr1:43454162..43454170,-#_6f69956b8073250c371333dfea6820cep@chr1:43454162..43454170, -
1.87e-86FFCP PHASE1:Mm9::chr4:133802857..133802884,+#_6f69956b8073250c371333dfea6820cep@chr4:133802857..133802884, +
1.87e-86FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_6f69956b8073250c371333dfea6820cep@chr19:10536797..10536802, -
1.87e-86FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_6f69956b8073250c371333dfea6820cep@chr17:13983160..13983167, +
1.87e-86FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_6f69956b8073250c371333dfea6820cep13@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_6f69956b8073250c371333dfea6820cep3@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr3:100724698..100724706,+#_6f69956b8073250c371333dfea6820cep@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_6f69956b8073250c371333dfea6820cep2@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207965..42207978,-#_6f69956b8073250c371333dfea6820cep5@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:13435173..13435186,+#_6f69956b8073250c371333dfea6820cep6@Fam70b
1.87e-86FFCP PHASE1:Mm9::chr13:78322383..78322395,-#_6f69956b8073250c371333dfea6820cep2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:172843847..172843880,-#_6f69956b8073250c371333dfea6820cep@chr1:172843847..172843880, -
1.87e-86FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_6f69956b8073250c371333dfea6820cep2@Otogl
1.87e-86FFCP PHASE1:Mm9::chr1:182528388..182528403,+#_6f69956b8073250c371333dfea6820cep@chr1:182528388..182528403, +
1.87e-86FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_6f69956b8073250c371333dfea6820cep2@Gpr152
1.87e-86FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_6f69956b8073250c371333dfea6820cep@chr17:13983179..13983190, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_6f69956b8073250c371333dfea6820cep5@Tecta
1.87e-86FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_6f69956b8073250c371333dfea6820cep@chr9:42206784..42206793, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_6f69956b8073250c371333dfea6820cep2@Tectb
1.87e-86FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_6f69956b8073250c371333dfea6820cep2@Slc26a5
1.87e-86FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_6f69956b8073250c371333dfea6820cep2@Fscn2
1.87e-86FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_6f69956b8073250c371333dfea6820cep4@BC030867
1.87e-86FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_6f69956b8073250c371333dfea6820cep@chr3:35012425..35012439, +
1.87e-86FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_6f69956b8073250c371333dfea6820cep@chr15:89215319..89215330, +
1.87e-86FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_6f69956b8073250c371333dfea6820cep4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr5:28035962..28035983,+#_6f69956b8073250c371333dfea6820cep@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_6f69956b8073250c371333dfea6820cep@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_6f69956b8073250c371333dfea6820cep@chr3:81012915..81012923, +
1.87e-86FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_6f69956b8073250c371333dfea6820cep4@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:68423014..68423037,+#_6f69956b8073250c371333dfea6820cep1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_6f69956b8073250c371333dfea6820cep@chr11:75421384..75421397, +
1.87e-86FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_6f69956b8073250c371333dfea6820cep@chr18:66033526..66033539, -
1.87e-86FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_6f69956b8073250c371333dfea6820cep@chr16:93971357..93971363, -
1.87e-86FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_6f69956b8073250c371333dfea6820cep@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_6f69956b8073250c371333dfea6820cep@chr15:12848147..12848162, +
1.87e-86FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_6f69956b8073250c371333dfea6820cep@chr4:154208086..154208123, +
1.87e-86FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_6f69956b8073250c371333dfea6820cep2@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_6f69956b8073250c371333dfea6820cep@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_6f69956b8073250c371333dfea6820cep@chr13:78257518..78257522, +
1.87e-86FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_6f69956b8073250c371333dfea6820cep@chr1:16651649..16651655, +
1.87e-86FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_6f69956b8073250c371333dfea6820cep@chr13:48087761..48087775, -
1.87e-86FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_6f69956b8073250c371333dfea6820cep@chr14:102297728..102297742, +
1.87e-86FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_6f69956b8073250c371333dfea6820cep7@Pkn3
1.87e-86FFCP PHASE1:Mm9::chr5:30710416..30710440,-#_6f69956b8073250c371333dfea6820cep2@Otof
1.87e-86FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_6f69956b8073250c371333dfea6820cep@chr11:4689776..4689785, -
1.87e-86FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_6f69956b8073250c371333dfea6820cep@chr9:42206784..42206793, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011941..67011951,+#_6f69956b8073250c371333dfea6820cep3@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_6f69956b8073250c371333dfea6820cep2@9230102O04Rik
1.87e-86FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_6f69956b8073250c371333dfea6820cep@chr14:102297728..102297742, +
1.87e-86FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_6f69956b8073250c371333dfea6820cep@chr9:50968647..50968668, -
1.87e-86FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_6f69956b8073250c371333dfea6820cep@chr11:8405038..8405048, -
1.87e-86FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_6f69956b8073250c371333dfea6820cep4@Chrna10
1.87e-86FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_6f69956b8073250c371333dfea6820cep1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr10:108316802..108316807,-#_6f69956b8073250c371333dfea6820cep@chr10:108316802..108316807, -
1.87e-86FFCP PHASE1:Mm9::chr14:47293496..47293510,-#_6f69956b8073250c371333dfea6820cep@chr14:47293496..47293510, -
1.87e-86FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_6f69956b8073250c371333dfea6820cep3@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_6f69956b8073250c371333dfea6820cep11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_6f69956b8073250c371333dfea6820cep@chr8:13414266..13414279, +
1.87e-86FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_6f69956b8073250c371333dfea6820cep@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_6f69956b8073250c371333dfea6820cep@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr7:109052262..109052291,-#_6f69956b8073250c371333dfea6820cep1@Tomt
1.87e-86FFCP PHASE2:Mm9::chr5:30710403..30710406,-#_6f69956b8073250c371333dfea6820cep10@Otof
1.87e-86FFCP PHASE1:Mm9::chr14:20649897..20649907,+#_6f69956b8073250c371333dfea6820cep@chr14:20649897..20649907, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0003067&oldid=3277502"