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UBERON:0005428

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Name:vagal neural crest
Namespace:FANTOM
Definition:"Vagal neural crest is adjacent to the first seven somites gives rise to both ganglionic and ectomesenchymal derivatives[ZFA]." [ZFIN:curator]
Xrefs:
links:

EHDAA2:0002156
EHDAA:669
TAO:0000818
VHOG:0001208
XAO:0004191

ZFA:0000818
Synonyms: "post-otic neural crest" EXACT [ZFA:0000818]
Subset: vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004121(ectoderm-derived structure),UBERON:0005291(embryonic tissue)
part_of:UBERON:0002342(neural crest)



Children

develops from:UBERON:0002005 (enteric nervous system)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005428 (vagal neural crest), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr6:52158594..52158603,-#_89c72bd5a98e952a8fc8003a417d1e10p@chr6:52158594..52158603, -
1.58e-86FFCP PHASE1:Mm9::chr6:52158594..52158603,-#_89c72bd5a98e952a8fc8003a417d1e10p@chr6:52158594..52158603, -
6.04e-65FFCP PHASE1:Mm9::chr4:152858080..152858084,-#_8a91fcfafc727ffb1e9910d7045eb73bp@chr4:152858080..152858084, -
6.04e-65FFCP PHASE2:Mm9::chr4:152858080..152858084,-#_8a91fcfafc727ffb1e9910d7045eb73bp@chr4:152858080..152858084, -
3.28e-58FFCP PHASE2:Mm9::chr7:143239748..143239753,+#_4f87dc3010366a331a0333cf03997cc9p@chr7:143239748..143239753, +
3.28e-58FFCP PHASE1:Mm9::chr7:143239748..143239753,+#_4f87dc3010366a331a0333cf03997cc9p@chr7:143239748..143239753, +
1.18e-44FFCP PHASE1:Mm9::chr1:88008549..88008559,-#_66bad8e94ffc42df5e46414218393752p4@Htr2b
1.18e-44FFCP PHASE2:Mm9::chr1:88008549..88008559,-#_66bad8e94ffc42df5e46414218393752p4@Htr2b
3.27e-44FFCP PHASE1:Mm9::chr2:74583733..74583738,+#_a8416a0dd040e6bb56cfe13778034acbp13@Hoxd3
3.27e-44FFCP PHASE2:Mm9::chr2:74583733..74583738,+#_a8416a0dd040e6bb56cfe13778034acbp13@Hoxd3
4.58e-44FFCP PHASE1:Mm9::chr13:96388617..96388624,-#_275ca3b6d6739077afb437785920d1cdp4@F2r
4.58e-44FFCP PHASE2:Mm9::chr13:96388617..96388624,-#_275ca3b6d6739077afb437785920d1cdp4@F2r
8.97e-44FFCP PHASE2:Mm9::chr5:88358803..88358820,+#_6ab279c7f6069716194237f1c35d4c43p@chr5:88358803..88358820, +
8.97e-44FFCP PHASE1:Mm9::chr5:88358803..88358820,+#_6ab279c7f6069716194237f1c35d4c43p@chr5:88358803..88358820, +
4.15e-39FFCP PHASE1:Mm9::chr11:4397590..4397595,-#_f9d6aa92f20996e0a042e99579aff684p@chr11:4397590..4397595, -
4.15e-39FFCP PHASE2:Mm9::chr11:4397590..4397595,-#_f9d6aa92f20996e0a042e99579aff684p@chr11:4397590..4397595, -
1.17e-38FFCP PHASE2:Mm9::chr9:35352286..35352290,-#_8ec495b5ad566e7fba67583c7c17cbbfp@chr9:35352286..35352290, -
1.17e-38FFCP PHASE1:Mm9::chr9:35352286..35352290,-#_8ec495b5ad566e7fba67583c7c17cbbfp@chr9:35352286..35352290, -
1.56e-38FFCP PHASE2:Mm9::chr15:102928215..102928218,-#_a9188c4443a5f539153ed5c2cc7c83d4p@chr15:102928215..102928218, -
1.56e-38FFCP PHASE1:Mm9::chr15:102928215..102928218,-#_a9188c4443a5f539153ed5c2cc7c83d4p@chr15:102928215..102928218, -
3.73e-38FFCP PHASE1:Mm9::chr11:96164868..96164875,+#_f0f4d188f761066804abae49b6e64c9fp5@Hoxb5
3.73e-38FFCP PHASE2:Mm9::chr11:96164868..96164875,+#_f0f4d188f761066804abae49b6e64c9fp5@Hoxb5
4.98e-38FFCP PHASE1:Mm9::chr11:96176093..96176104,+#_4e940bad2ded93fb3c5bc88ff4a7da40p@chr11:96176093..96176104, +
4.98e-38FFCP PHASE2:Mm9::chr11:96176093..96176104,+#_4e940bad2ded93fb3c5bc88ff4a7da40p@chr11:96176093..96176104, +
3.67e-34FFCP PHASE2:Mm9::chr8:11952680..11952690,+#_03336e3e9352f72a4f83ec34105fc42dp@chr8:11952680..11952690, +
3.67e-34FFCP PHASE1:Mm9::chr8:11952680..11952690,+#_03336e3e9352f72a4f83ec34105fc42dp@chr8:11952680..11952690, +
4.74e-34FFCP PHASE2:Mm9::chr16:5855821..5855836,+#_218020c519a0e133bf598def34f646a5p@chr16:5855821..5855836, +
4.74e-34FFCP PHASE2:Mm9::chr10:90644180..90644195,-#_218020c519a0e133bf598def34f646a5p@chr10:90644180..90644195, -
4.74e-34FFCP PHASE1:Mm9::chr10:90644180..90644195,-#_218020c519a0e133bf598def34f646a5p@chr10:90644180..90644195, -
4.74e-34FFCP PHASE1:Mm9::chr16:5855821..5855836,+#_218020c519a0e133bf598def34f646a5p@chr16:5855821..5855836, +
6.12e-34FFCP PHASE2:Mm9::chr2:31305411..31305419,+#_75d58b906619716caa97abcb68372fa2p@chr2:31305411..31305419, +
6.12e-34FFCP PHASE1:Mm9::chr2:31305411..31305419,+#_75d58b906619716caa97abcb68372fa2p@chr2:31305411..31305419, +
1.69e-33FFCP PHASE1:Mm9::chr16:5855860..5855872,+#_476d24dd2355920a9240dd5fc405081bp@chr16:5855860..5855872, +
1.69e-33FFCP PHASE2:Mm9::chr16:5855860..5855872,+#_476d24dd2355920a9240dd5fc405081bp@chr16:5855860..5855872, +
9.86e-33FFCP PHASE2:Mm9::chr12:88020400..88020411,+#_6c7085c0ebd12b1879ff6b5eb3c98570p@chr12:88020400..88020411, +
9.86e-33FFCP PHASE1:Mm9::chr12:88020400..88020411,+#_6c7085c0ebd12b1879ff6b5eb3c98570p@chr12:88020400..88020411, +
1.16e-30FFCP PHASE2:Mm9::chr6:52158693..52158704,-#_aca926e7c508c00d4db9b40efe4f1c45p3@Hoxa6
1.16e-30FFCP PHASE1:Mm9::chr6:52158693..52158704,-#_aca926e7c508c00d4db9b40efe4f1c45p3@Hoxa6
4.54e-30FFCP PHASE2:Mm9::chr11:96168366..96168369,+#_4f25c63127e0afc7fd14d9ce18e50702p@chr11:96168366..96168369, +
4.54e-30FFCP PHASE1:Mm9::chr11:113795301..113795315,+#_4f25c63127e0afc7fd14d9ce18e50702p@chr11:113795301..113795315, +
4.54e-30FFCP PHASE1:Mm9::chr11:96168366..96168369,+#_4f25c63127e0afc7fd14d9ce18e50702p@chr11:96168366..96168369, +
4.54e-30FFCP PHASE2:Mm9::chr11:113795301..113795315,+#_4f25c63127e0afc7fd14d9ce18e50702p@chr11:113795301..113795315, +
5.61e-30FFCP PHASE2:Mm9::chr14:20570183..20570190,+#_406e42c4a907edb4a36786af1b069949p3@Nid2
5.61e-30FFCP PHASE1:Mm9::chr14:20570183..20570190,+#_406e42c4a907edb4a36786af1b069949p3@Nid2
5.7e-30FFCP PHASE2:Mm9::chr8:11782453..11782481,+#_29b7dd66fc292b9da8bb634849cec2acp25@Arhgef7
5.7e-30FFCP PHASE1:Mm9::chr8:11782453..11782481,+#_29b7dd66fc292b9da8bb634849cec2acp25@Arhgef7
7.14e-30FFCP PHASE2:Mm9::chr7:98820891..98820900,+#_5a3cea0772a738e98750b5d1597e7277p34@Dlg2
7.14e-30FFCP PHASE1:Mm9::chr7:98820891..98820900,+#_5a3cea0772a738e98750b5d1597e7277p34@Dlg2
1.12e-29FFCP PHASE2:Mm9::chr6:118116455..118116458,-#_d3b74809e2c6087195ec6464d4db340bp@chr6:118116455..118116458, -
1.12e-29FFCP PHASE1:Mm9::chr6:118116455..118116458,-#_d3b74809e2c6087195ec6464d4db340bp@chr6:118116455..118116458, -
1.4e-29FFCP PHASE2:Mm9::chr2:119624214..119624225,+#_639dc1233d29399dfb97a79c3dbed821p7@Tyro3
1.4e-29FFCP PHASE1:Mm9::chr2:119624214..119624225,+#_639dc1233d29399dfb97a79c3dbed821p7@Tyro3
1.54e-29FFCP PHASE1:Mm9::chr5:88358878..88358890,+#_dc8213fe51728d070d6cedb02fdacbbdp@chr5:88358878..88358890, +
1.54e-29FFCP PHASE2:Mm9::chr5:88358878..88358890,+#_dc8213fe51728d070d6cedb02fdacbbdp@chr5:88358878..88358890, +
1.54e-29FFCP PHASE1:Mm9::chr1:88007341..88007350,-#_dc8213fe51728d070d6cedb02fdacbbdp7@Htr2b
1.54e-29FFCP PHASE2:Mm9::chr1:88007341..88007350,-#_dc8213fe51728d070d6cedb02fdacbbdp7@Htr2b
2.19e-29FFCP PHASE1:Mm9::chr15:90848413..90848436,-#_92966c00140aac260affb926fa8e6415p@chr15:90848413..90848436, -
2.19e-29FFCP PHASE2:Mm9::chr15:90848413..90848436,-#_92966c00140aac260affb926fa8e6415p@chr15:90848413..90848436, -
3.42e-29FFCP PHASE2:Mm9::chr9:20777404..20777418,+#_f482764d60e839ec13c2e84edf1fbc24p@chr9:20777404..20777418, +
3.42e-29FFCP PHASE1:Mm9::chr9:20777404..20777418,+#_f482764d60e839ec13c2e84edf1fbc24p@chr9:20777404..20777418, +
7.38e-28FFCP PHASE2:Mm9::chr6:52134126..52134150,-#_9b71565ef4b7a8a5e2e2a0a8f100bab2p3@Hoxa3
7.38e-28FFCP PHASE1:Mm9::chr6:52134126..52134150,-#_9b71565ef4b7a8a5e2e2a0a8f100bab2p3@Hoxa3
9.07e-28FFCP PHASE2:Mm9::chr11:106874215..106874219,+#_ce433702a04463223be4f26281843a8cp@chr11:106874215..106874219, +
9.07e-28FFCP PHASE1:Mm9::chr11:106874215..106874219,+#_ce433702a04463223be4f26281843a8cp@chr11:106874215..106874219, +
1.11e-27FFCP PHASE2:Mm9::chr5:46030754..46030764,-#_c0bdeb625e091d8e26668bfbac28397cp9@Fam184b
1.11e-27FFCP PHASE1:Mm9::chr5:46030754..46030764,-#_c0bdeb625e091d8e26668bfbac28397cp9@Fam184b
1.37e-27FFCP PHASE1:Mm9::chr11:96175972..96175978,+#_595c3eb439d97647967a4d3fa21345a3p@chr11:96175972..96175978, +
1.37e-27FFCP PHASE2:Mm9::chr11:96175972..96175978,+#_595c3eb439d97647967a4d3fa21345a3p@chr11:96175972..96175978, +
2.06e-27FFCP PHASE2:Mm9::chr5:67486110..67486118,-#_e1f0e509839fd2bbfc2f18b19551f97ap@chr5:67486110..67486118, -
2.06e-27FFCP PHASE1:Mm9::chr5:67486110..67486118,-#_e1f0e509839fd2bbfc2f18b19551f97ap@chr5:67486110..67486118, -
5.7e-27FFCP PHASE1:Mm9::chr1:65358027..65358031,+#_69552ed19a4bdba9422d9edcaa2ddb8cp1@Pth2r
5.7e-27FFCP PHASE2:Mm9::chr1:65358027..65358031,+#_69552ed19a4bdba9422d9edcaa2ddb8cp1@Pth2r
8.55e-27FFCP PHASE2:Mm9::chr3:59108872..59108875,+#_73cdc8ce27d2d49078fd92254ac5c613p@chr3:59108872..59108875, +
8.55e-27FFCP PHASE1:Mm9::chr3:59108872..59108875,+#_73cdc8ce27d2d49078fd92254ac5c613p@chr3:59108872..59108875, +
3.49e-26FFCP PHASE2:Mm9::chr1:94648758..94648763,+#_bcd3fef84c885386fedb0dad9f74f929p@chr1:94648758..94648763, +
3.49e-26FFCP PHASE1:Mm9::chr1:94648758..94648763,+#_bcd3fef84c885386fedb0dad9f74f929p@chr1:94648758..94648763, +
5.19e-26FFCP PHASE2:Mm9::chr1:112856387..112856393,-#_18f6e94397be61627d9bca81066338a1p@chr1:112856387..112856393, -
5.19e-26FFCP PHASE1:Mm9::chr1:112856387..112856393,-#_18f6e94397be61627d9bca81066338a1p@chr1:112856387..112856393, -
1.46e-25FFCP PHASE2:Mm9::chr11:96164887..96164894,+#_3aebd940b641d26b46eeb5e37372a31ep4@Hoxb5
1.46e-25FFCP PHASE1:Mm9::chr11:96164887..96164894,+#_3aebd940b641d26b46eeb5e37372a31ep4@Hoxb5
4.47e-25FFCP PHASE1:Mm9::chr2:67492047..67492052,+#_17fef2ace03e272b17fd485ad77e27aep@chr2:67492047..67492052, +
4.47e-25FFCP PHASE2:Mm9::chr2:67492047..67492052,+#_17fef2ace03e272b17fd485ad77e27aep@chr2:67492047..67492052, +
6.49e-25FFCP PHASE1:Mm9::chr2:74583741..74583750,+#_1002a4387ae773569b5e224ec021c2a0p10@Hoxd3
6.49e-25FFCP PHASE2:Mm9::chr2:74583741..74583750,+#_1002a4387ae773569b5e224ec021c2a0p10@Hoxd3
7.81e-25FFCP PHASE2:Mm9::chr2:119586145..119586157,-#_9ab4a869e5ec093a9cc671974b9a9998p2@Ltk
7.81e-25FFCP PHASE1:Mm9::chr2:119586145..119586157,-#_9ab4a869e5ec093a9cc671974b9a9998p2@Ltk
1.13e-24FFCP PHASE1:Mm9::chr11:96165338..96165355,+#_454afc776771dc9d260d1791221d28b4p@chr11:96165338..96165355, +
1.13e-24FFCP PHASE2:Mm9::chr11:96165338..96165355,+#_454afc776771dc9d260d1791221d28b4p@chr11:96165338..96165355, +
1.63e-24FFCP PHASE1:Mm9::chr7:38151719..38151721,-#_1c544a645bbd8660515d869ec958159fp@chr7:38151719..38151721, -
1.63e-24FFCP PHASE2:Mm9::chr7:38151719..38151721,-#_1c544a645bbd8660515d869ec958159fp@chr7:38151719..38151721, -
4.9e-24FFCP PHASE1:Mm9::chr12:100139521..100139532,-#_b49623208d60cc7ae476d6af32680f5cp4@Eml5
4.9e-24FFCP PHASE2:Mm9::chr12:100139521..100139532,-#_b49623208d60cc7ae476d6af32680f5cp4@Eml5
5.11e-24FFCP PHASE2:Mm9::chr8:26610056..26610057,-#_e43fcaebd3f137838953ef9d94cd7017p@chr8:26610056..26610057, -
5.11e-24FFCP PHASE1:Mm9::chr8:26610056..26610057,-#_e43fcaebd3f137838953ef9d94cd7017p@chr8:26610056..26610057, -
6.68e-24FFCP PHASE1:Mm9::chr5:88358947..88358973,+#_e2c924d442f1aa3dca67f1359442fa0ep@chr5:88358947..88358973, +
6.68e-24FFCP PHASE2:Mm9::chr5:88358947..88358973,+#_e2c924d442f1aa3dca67f1359442fa0ep@chr5:88358947..88358973, +
1.19e-23FFCP PHASE2:Mm9::chr8:11913012..11913024,+#_82a7dcfa99516e31371e380cc0dc5da5p@chr8:11913012..11913024, +
1.19e-23FFCP PHASE1:Mm9::chr8:11913012..11913024,+#_82a7dcfa99516e31371e380cc0dc5da5p@chr8:11913012..11913024, +
1.21e-23FFCP PHASE1:Mm9::chr9:42209681..42209703,-#_b22fc76b9062a14f3441498c765ca84ep@chr9:42209681..42209703, -
1.21e-23FFCP PHASE2:Mm9::chr9:42209759..42209780,-#_b22fc76b9062a14f3441498c765ca84ep@chr9:42209759..42209780, -










Property "Property value" (as page type) with input value "UBPROP:0000001 "Vagal neural crest is adjacent to the first seven somites gives rise to both ganglionic and ectomesenchymal derivatives.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.