UBERON:0005728: Difference between revisions
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Revision as of 17:06, 26 June 2012
| Name: | extraembryonic mesoderm | ||
|---|---|---|---|
| Definition: | "." [1] | ||
| Xrefs: |
| ||
| Synonyms: | "extra-embryonic mesoderm" EXACT [] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000478(extraembryonic structure),UBERON:0004120(mesoderm-derived structure) |
|---|
Children
| develops from: | UBERON:0007806 (connecting stalk) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005728 (extraembryonic mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.79e-79 | FFCP PHASE1:Hg19::chr7:135931480..135931486,+#_85b1e2f99a5ef25ddd5bf609ad2a6148 | p@chr7:135931480..135931486, + |
| 5.79e-79 | FFCP PHASE2:Hg19::chr10:120921270..120921282,-#_85b1e2f99a5ef25ddd5bf609ad2a6148 | p@chr10:120921270..120921282, - |
| 5.79e-79 | FFCP PHASE2:Hg19::chr7:135931480..135931486,+#_85b1e2f99a5ef25ddd5bf609ad2a6148 | p@chr7:135931480..135931486, + |
| 5.79e-79 | FFCP PHASE1:Hg19::chr10:120921270..120921282,-#_85b1e2f99a5ef25ddd5bf609ad2a6148 | p@chr10:120921270..120921282, - |
| 2.16e-63 | FFCP PHASE2:Hg19::chr1:205744117..205744127,-#_510c878256075d28ba0bf7cd14fe04ab | p8@RAB7L1 |
| 2.16e-63 | FFCP PHASE1:Hg19::chr1:205744117..205744127,-#_510c878256075d28ba0bf7cd14fe04ab | p8@RAB7L1 |
| 1.1e-59 | FFCP PHASE2:Hg19::chr3:157301317..157301362,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr3:157301317..157301362, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:167932279..167932291,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr4:167932279..167932291, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:119281371..119281382,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr3:119281371..119281382, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr6:491208..491217,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr6:491208..491217, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr22:20105576..20105585,+#_f1700f6fa279d66bc6746540ac32fc48 | p11@RANBP1 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr10:61574767..61574776,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr10:61574767..61574776, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr5:28145264..28145272,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr5:28145264..28145272, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr19:40074306..40074328,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr19:40074306..40074328, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:45063061..45063082,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr2:45063061..45063082, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr6:138023154..138023161,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr6:138023154..138023161, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr6:484679..484683,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr6:484679..484683, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr21:18180062..18180079,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr21:18180062..18180079, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:15633244..15633249,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr2:15633244..15633249, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr12:24889813..24889821,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr12:24889813..24889821, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr10:120924761..120924770,-#_f1700f6fa279d66bc6746540ac32fc48 | p10@SFXN4 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr6:87324188..87324195,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr6:87324188..87324195, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr7:142250880..142250889,-#_f1700f6fa279d66bc6746540ac32fc48 | p4@AF430683, p4@AF430684, p4@AF430685 |
| 1.1e-59 | FFCP PHASE2:Hg19::chr4:167938808..167938815,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr4:167938808..167938815, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:228216610..228216617,+#_f1700f6fa279d66bc6746540ac32fc48 | p18@MFF |
| 1.1e-59 | FFCP PHASE1:Hg19::chr22:37484379..37484392,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr22:37484379..37484392, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:228216535..228216554,+#_f1700f6fa279d66bc6746540ac32fc48 | p14@MFF |
| 1.1e-59 | FFCP PHASE2:Hg19::chr1:212870782..212870788,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr1:212870782..212870788, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:75655787..75655802,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr3:75655787..75655802, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr6:137816618..137816627,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr6:137816618..137816627, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr7:106363986..106363994,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr7:106363986..106363994, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr14:76957754..76957760,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr14:76957754..76957760, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr10:120921294..120921306,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr10:120921294..120921306, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr7:135735084..135735112,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr7:135735084..135735112, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr21:18180126..18180130,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr21:18180126..18180130, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr7:45954667..45954675,-#_f1700f6fa279d66bc6746540ac32fc48 | p42@IGFBP3 |
| 1.1e-59 | FFCP PHASE2:Hg19::chr9:74997054..74997058,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr9:74997054..74997058, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:195306434..195306439,-#_f1700f6fa279d66bc6746540ac32fc48 | p10@APOD |
| 1.1e-59 | FFCP PHASE1:Hg19::chr7:106363901..106363915,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr7:106363901..106363915, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:22771722..22771733,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr20:22771722..22771733, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr22:37484406..37484413,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr22:37484406..37484413, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:11264766..11264775,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr2:11264766..11264775, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr19:49488905..49488920,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr19:49488905..49488920, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr15:43323789..43323811,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr15:43323789..43323811, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr12:130530117..130530125,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr12:130530117..130530125, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr10:15035430..15035449,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr10:15035430..15035449, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr8:56618992..56618998,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr8:56618992..56618998, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:167957459..167957470,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr4:167957459..167957470, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr21:43934923..43934932,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr21:43934923..43934932, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr3:111319059..111319101,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr3:111319059..111319101, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr1:207617923..207617929,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr1:207617923..207617929, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr7:17543537..17543548,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr7:17543537..17543548, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr7:135705379..135705388,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr7:135705379..135705388, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr16:86326031..86326033,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr16:86326031..86326033, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr19:49488921..49488932,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr19:49488921..49488932, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr13:101999642..101999655,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr13:101999642..101999655, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr9:74995293..74995311,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr9:74995293..74995311, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr16:86326031..86326033,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr16:86326031..86326033, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr11:117957610..117957619,-#_f1700f6fa279d66bc6746540ac32fc48 | p3@LOC100526771 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:167791926..167791930,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr4:167791926..167791930, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr6:149490934..149490939,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr6:149490934..149490939, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr20:38442120..38442126,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr20:38442120..38442126, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr11:90524493..90524505,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr11:90524493..90524505, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr6:138023015..138023024,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr6:138023015..138023024, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:148284480..148284484,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr2:148284480..148284484, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr21:18178842..18178867,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr21:18178842..18178867, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:148293141..148293150,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr2:148293141..148293150, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr14:76957814..76957826,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr14:76957814..76957826, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr3:119279036..119279047,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr3:119279036..119279047, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr7:106397632..106397643,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr7:106397632..106397643, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:234765062..234765067,+#_f1700f6fa279d66bc6746540ac32fc48 | p6@LINC00184 |
| 1.1e-59 | FFCP PHASE2:Hg19::chr7:106363860..106363870,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr7:106363860..106363870, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr19:53510877..53510886,+#_f1700f6fa279d66bc6746540ac32fc48 | p2@uc002qao.2 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr14:76017349..76017357,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr14:76017349..76017357, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr10:109197952..109197957,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr10:109197952..109197957, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr7:142250929..142250940,-#_f1700f6fa279d66bc6746540ac32fc48 | p3@AF430683, p3@AF430684, p3@AF430685 |
| 1.1e-59 | FFCP PHASE2:Hg19::chr10:111805635..111805642,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr10:111805635..111805642, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr11:128154946..128154955,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr11:128154946..128154955, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr9:75002215..75002221,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr9:75002215..75002221, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr7:135705366..135705371,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr7:135705366..135705371, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr21:18179708..18179733,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr21:18179708..18179733, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr9:74995216..74995247,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr9:74995216..74995247, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr22:20105576..20105585,+#_f1700f6fa279d66bc6746540ac32fc48 | p11@RANBP1 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:45926401..45926410,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr3:45926401..45926410, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr6:87324188..87324195,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr6:87324188..87324195, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr3:45926316..45926329,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr3:45926316..45926329, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr8:12548586..12548602,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr8:12548586..12548602, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chrX:109653507..109653518,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chrX:109653507..109653518, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:45063061..45063082,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr2:45063061..45063082, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:157301317..157301362,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr3:157301317..157301362, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr19:53511711..53511720,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr19:53511711..53511720, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:15633244..15633249,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr2:15633244..15633249, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr8:42248931..42248936,+#_f1700f6fa279d66bc6746540ac32fc48 | p6@VDAC3 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:167938808..167938815,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr4:167938808..167938815, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr10:15013428..15013456,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr10:15013428..15013456, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:212870782..212870788,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr1:212870782..212870788, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chrX:10129292..10129306,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chrX:10129292..10129306, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr6:150322254..150322291,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr6:150322254..150322291, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr5:77713534..77713543,+#_f1700f6fa279d66bc6746540ac32fc48 | p@chr5:77713534..77713543, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr9:74981579..74981583,-#_f1700f6fa279d66bc6746540ac32fc48 | p@chr9:74981579..74981583, - |
