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CL:0000775

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Name:neutrophil
Namespace:FANTOM
Definition:"Any of the immature or mature forms of a granular leukocyte that in its mature form has a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes." [GOC:add, GOC:amm, GOC:tfm, ISBN:0721601464]
Xrefs:
links:

BTO:0000130

FMA:62860
Synonyms: "neutrocyte" EXACT []
"neutrophil leucocyte" EXACT []
"neutrophil leukocyte" EXACT []
"neutrophilic leucocyte" EXACT []
"neutrophilic leukocyte" EXACT []
"PMN" BROAD []
"poly" BROAD []
"polymorphonuclear leucocyte" BROAD []
"polymorphonuclear leukocyte" BROAD []
"polymorphonuclear neutrophil" BROAD []
"polynuclear neutrophilic leucocyte" BROAD []
"polynuclear neutrophilic leukocyte" BROAD []


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000094(granulocyte)



Children


derives from:FF:0000122 (human neutrophil sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000775 (neutrophil), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
2.79e-195FFCP PHASE1:Hg19::chr1:17418980..17418990,-#_871af0b89492d5c9d15104e0740c9bfcp@chr1:17418980..17418990, -
2.79e-195FFCP PHASE1:Hg19::chr7:149462556..149462563,-#_871af0b89492d5c9d15104e0740c9bfcp@chr7:149462556..149462563, -
2.79e-195FFCP PHASE2:Hg19::chr2:102608625..102608637,-#_871af0b89492d5c9d15104e0740c9bfcp@chr2:102608625..102608637, -
2.79e-195FFCP PHASE1:Hg19::chr2:102608625..102608637,-#_871af0b89492d5c9d15104e0740c9bfc-, p@chr2:102608625..102608637
2.79e-195FFCP PHASE2:Hg19::chr7:149462556..149462563,-#_871af0b89492d5c9d15104e0740c9bfcp@chr7:149462556..149462563, -
2.79e-195FFCP PHASE2:Hg19::chr1:17418980..17418990,-#_871af0b89492d5c9d15104e0740c9bfcp@chr1:17418980..17418990, -
3.27e-147FFCP PHASE2:Hg19::chr6:11332062..11332081,-#_ea26c3aa3a24283383db7de1f1f0b96ap@chr6:11332062..11332081, -
3.27e-147FFCP PHASE2:Hg19::chr6:11351100..11351118,-#_ea26c3aa3a24283383db7de1f1f0b96ap@chr6:11351100..11351118, -
3.27e-147FFCP PHASE2:Hg19::chr6:11360439..11360452,-#_ea26c3aa3a24283383db7de1f1f0b96ap@chr6:11360439..11360452, -
3.27e-147FFCP PHASE2:Hg19::chr7:105903055..105903058,-#_ea26c3aa3a24283383db7de1f1f0b96ap@chr7:105903055..105903058, -
3.27e-147FFCP PHASE2:Hg19::chr7:105904960..105904973,-#_ea26c3aa3a24283383db7de1f1f0b96ap@chr7:105904960..105904973, -
3.27e-147FFCP PHASE2:Hg19::chr7:105917431..105917440,-#_ea26c3aa3a24283383db7de1f1f0b96ap@chr7:105917431..105917440, -
3.27e-147FFCP PHASE2:Hg19::chr7:105917805..105917815,-#_ea26c3aa3a24283383db7de1f1f0b96ap@chr7:105917805..105917815, -
3.27e-147FFCP PHASE2:Hg19::chr7:105921112..105921121,-#_ea26c3aa3a24283383db7de1f1f0b96ap@chr7:105921112..105921121, -
3.27e-147FFCP PHASE2:Hg19::chr7:112062506..112062509,+#_ea26c3aa3a24283383db7de1f1f0b96ap@chr7:112062506..112062509, +
3.27e-147FFCP PHASE1:Hg19::chr6:11332062..11332081,-#_ea26c3aa3a24283383db7de1f1f0b96ap@chr6:11332062..11332081, -
3.27e-147FFCP PHASE1:Hg19::chr6:11351100..11351118,-#_ea26c3aa3a24283383db7de1f1f0b96ap@chr6:11351100..11351118, -
3.27e-147FFCP PHASE1:Hg19::chr6:11360439..11360452,-#_ea26c3aa3a24283383db7de1f1f0b96ap@chr6:11360439..11360452, -
3.27e-147FFCP PHASE1:Hg19::chr7:105903055..105903058,-#_ea26c3aa3a24283383db7de1f1f0b96ap@chr7:105903055..105903058, -
3.27e-147FFCP PHASE1:Hg19::chr7:105904960..105904973,-#_ea26c3aa3a24283383db7de1f1f0b96ap@chr7:105904960..105904973, -
3.27e-147FFCP PHASE1:Hg19::chr7:105917431..105917440,-#_ea26c3aa3a24283383db7de1f1f0b96ap@chr7:105917431..105917440, -
3.27e-147FFCP PHASE1:Hg19::chr7:105917805..105917815,-#_ea26c3aa3a24283383db7de1f1f0b96ap@chr7:105917805..105917815, -
3.27e-147FFCP PHASE1:Hg19::chr7:105921112..105921121,-#_ea26c3aa3a24283383db7de1f1f0b96ap@chr7:105921112..105921121, -
3.27e-147FFCP PHASE1:Hg19::chr7:112062506..112062509,+#_ea26c3aa3a24283383db7de1f1f0b96ap@chr7:112062506..112062509, +
3.27e-147FFCP PHASE1:Hg19::chr10:89648443..89648447,+#_ea26c3aa3a24283383db7de1f1f0b96ap@chr10:89648443..89648447, +
3.27e-147FFCP PHASE2:Hg19::chr10:89648443..89648447,+#_ea26c3aa3a24283383db7de1f1f0b96ap@chr10:89648443..89648447, +
3.27e-147FFCP PHASE2:Hg19::chr2:70274655..70274660,-#_ea26c3aa3a24283383db7de1f1f0b96ap@chr2:70274655..70274660, -
3.27e-147FFCP PHASE1:Hg19::chr8:142317989..142317992,-#_ea26c3aa3a24283383db7de1f1f0b96a-, p@chr8:142317989..142317992
3.27e-147FFCP PHASE1:Hg19::chr2:103043089..103043100,+#_ea26c3aa3a24283383db7de1f1f0b96ap@chr2:103043089..103043100, +
3.27e-147FFCP PHASE1:Hg19::chr2:70274655..70274660,-#_ea26c3aa3a24283383db7de1f1f0b96ap@chr2:70274655..70274660, -
3.27e-147FFCP PHASE2:Hg19::chr8:142317989..142317992,-#_ea26c3aa3a24283383db7de1f1f0b96ap@chr8:142317989..142317992, -
3.27e-147FFCP PHASE2:Hg19::chr2:103043089..103043100,+#_ea26c3aa3a24283383db7de1f1f0b96ap@chr2:103043089..103043100, +
5.41e-147FFCP PHASE1:Hg19::chr7:112062482..112062489,+#_d0cedca3613c3c25466d5d4191032553p@chr7:112062482..112062489, +
5.41e-147FFCP PHASE2:Hg19::chr7:112062482..112062489,+#_d0cedca3613c3c25466d5d4191032553p@chr7:112062482..112062489, +
8.93e-147FFCP PHASE2:Hg19::chr1:21904038..21904043,+#_1b38279c2b2b8ba34492f2f6d8721b99p@chr1:21904038..21904043, +
8.93e-147FFCP PHASE2:Hg19::chr21:35570862..35570865,+#_1b38279c2b2b8ba34492f2f6d8721b99p@chr21:35570862..35570865, +
8.93e-147FFCP PHASE1:Hg19::chr1:21904038..21904043,+#_1b38279c2b2b8ba34492f2f6d8721b99p@chr1:21904038..21904043, +
8.93e-147FFCP PHASE1:Hg19::chr21:35570862..35570865,+#_1b38279c2b2b8ba34492f2f6d8721b99p@chr21:35570862..35570865, +
8.93e-147FFCP PHASE1:Hg19::chr3:134309990..134309996,-#_1b38279c2b2b8ba34492f2f6d8721b99p@chr3:134309990..134309996, -
8.93e-147FFCP PHASE2:Hg19::chr3:134309990..134309996,-#_1b38279c2b2b8ba34492f2f6d8721b99p@chr3:134309990..134309996, -
1.47e-146FFCP PHASE1:Hg19::chr17:57785324..57785365,+#_41e4a750d9194fa8c35e733953dbd02dp@chr17:57785324..57785365, +
1.47e-146FFCP PHASE2:Hg19::chr17:57785324..57785365,+#_41e4a750d9194fa8c35e733953dbd02dp@chr17:57785324..57785365, +
8.98e-131FFCP PHASE2:Hg19::chr2:121011894..121011895,-#_eba313c3be7857868bf130e7c628ed38p@chr2:121011894..121011895, -
8.98e-131FFCP PHASE1:Hg19::chr2:121011894..121011895,-#_eba313c3be7857868bf130e7c628ed38p@chr2:121011894..121011895, -
2.33e-118FFCP PHASE1:Hg19::chr1:36938272..36938282,-#_79d541ddab00744ff3a871f84e974b9ap35@CSF3R
2.33e-118FFCP PHASE1:Hg19::chr20:1545770..1545777,-#_79d541ddab00744ff3a871f84e974b9ap@chr20:1545770..1545777, -
2.33e-118FFCP PHASE1:Hg19::chr20:55012583..55012585,+#_79d541ddab00744ff3a871f84e974b9ap@chr20:55012583..55012585, +
2.33e-118FFCP PHASE1:Hg19::chr2:143908003..143908010,-#_79d541ddab00744ff3a871f84e974b9ap@chr2:143908003..143908010, -
2.33e-118FFCP PHASE2:Hg19::chr16:3107107..3107117,+#_79d541ddab00744ff3a871f84e974b9ap@chr16:3107107..3107117, +
2.33e-118FFCP PHASE1:Hg19::chr8:97657886..97657892,+#_79d541ddab00744ff3a871f84e974b9ap@chr8:97657886..97657892, +
2.33e-118FFCP PHASE1:Hg19::chr6:11313936..11313940,-#_79d541ddab00744ff3a871f84e974b9ap@chr6:11313936..11313940, -
2.33e-118FFCP PHASE1:Hg19::chr7:102071349..102071355,-#_79d541ddab00744ff3a871f84e974b9a-, p@chr7:102071349..102071355
2.33e-118FFCP PHASE1:Hg19::chr7:105917490..105917499,-#_79d541ddab00744ff3a871f84e974b9ap@chr7:105917490..105917499, -
2.33e-118FFCP PHASE1:Hg19::chr7:112062470..112062479,+#_79d541ddab00744ff3a871f84e974b9ap@chr7:112062470..112062479, +
2.33e-118FFCP PHASE2:Hg19::chr6:11313936..11313940,-#_79d541ddab00744ff3a871f84e974b9ap@chr6:11313936..11313940, -
2.33e-118FFCP PHASE2:Hg19::chr19:14774330..14774343,-#_79d541ddab00744ff3a871f84e974b9ap@chr19:14774330..14774343, -
2.33e-118FFCP PHASE2:Hg19::chr7:102071349..102071355,-#_79d541ddab00744ff3a871f84e974b9ap@chr7:102071349..102071355, -
2.33e-118FFCP PHASE2:Hg19::chr7:105917490..105917499,-#_79d541ddab00744ff3a871f84e974b9ap@chr7:105917490..105917499, -
2.33e-118FFCP PHASE2:Hg19::chr7:112062470..112062479,+#_79d541ddab00744ff3a871f84e974b9ap@chr7:112062470..112062479, +
2.33e-118FFCP PHASE2:Hg19::chr2:143908003..143908010,-#_79d541ddab00744ff3a871f84e974b9ap@chr2:143908003..143908010, -
2.33e-118FFCP PHASE1:Hg19::chr16:3107107..3107117,+#_79d541ddab00744ff3a871f84e974b9ap@chr16:3107107..3107117, +
2.33e-118FFCP PHASE1:Hg19::chr19:14774330..14774343,-#_79d541ddab00744ff3a871f84e974b9ap@chr19:14774330..14774343, -
2.33e-118FFCP PHASE1:Hg19::chr1:208712283..208712291,+#_79d541ddab00744ff3a871f84e974b9ap@chr1:208712283..208712291, +
2.33e-118FFCP PHASE2:Hg19::chr1:208712283..208712291,+#_79d541ddab00744ff3a871f84e974b9ap@chr1:208712283..208712291, +
2.33e-118FFCP PHASE2:Hg19::chr1:36938272..36938282,-#_79d541ddab00744ff3a871f84e974b9ap35@CSF3R
2.33e-118FFCP PHASE2:Hg19::chr8:97657886..97657892,+#_79d541ddab00744ff3a871f84e974b9ap@chr8:97657886..97657892, +
2.33e-118FFCP PHASE2:Hg19::chr20:1545770..1545777,-#_79d541ddab00744ff3a871f84e974b9ap@chr20:1545770..1545777, -
2.33e-118FFCP PHASE2:Hg19::chr20:55012583..55012585,+#_79d541ddab00744ff3a871f84e974b9ap@chr20:55012583..55012585, +
3.48e-118FFCP PHASE2:Hg19::chr20:56861864..56861875,-#_8101d934d0e9dad8c1f55052b5ef3c22p@chr20:56861864..56861875, -
3.48e-118FFCP PHASE2:Hg19::chr20:56861880..56861893,-#_8101d934d0e9dad8c1f55052b5ef3c22p@chr20:56861880..56861893, -
3.48e-118FFCP PHASE1:Hg19::chr20:56861864..56861875,-#_8101d934d0e9dad8c1f55052b5ef3c22p@chr20:56861864..56861875, -
3.48e-118FFCP PHASE1:Hg19::chr20:56861880..56861893,-#_8101d934d0e9dad8c1f55052b5ef3c22p@chr20:56861880..56861893, -
3.48e-118FFCP PHASE1:Hg19::chr2:120967895..120967903,-#_8101d934d0e9dad8c1f55052b5ef3c22p@chr2:120967895..120967903, -
3.48e-118FFCP PHASE2:Hg19::chr2:120967895..120967903,-#_8101d934d0e9dad8c1f55052b5ef3c22p@chr2:120967895..120967903, -
5.2e-118FFCP PHASE2:Hg19::chr1:27155357..27155367,+#_03d495d6c6a946792b82098cf3997b11p@chr1:27155357..27155367, +
5.2e-118FFCP PHASE2:Hg19::chr8:97669948..97669957,+#_03d495d6c6a946792b82098cf3997b11p@chr8:97669948..97669957, +
5.2e-118FFCP PHASE2:Hg19::chr2:103039548..103039555,+#_03d495d6c6a946792b82098cf3997b11p9@IL18RAP
5.2e-118FFCP PHASE2:Hg19::chr2:103039589..103039596,+#_03d495d6c6a946792b82098cf3997b11p8@IL18RAP
5.2e-118FFCP PHASE2:Hg19::chr12:8720206..8720211,-#_03d495d6c6a946792b82098cf3997b11p4@ENST00000542819
5.2e-118FFCP PHASE1:Hg19::chr8:97669948..97669957,+#_03d495d6c6a946792b82098cf3997b11p@chr8:97669948..97669957, +
5.2e-118FFCP PHASE2:Hg19::chr17:80187468..80187472,+#_03d495d6c6a946792b82098cf3997b11p@chr17:80187468..80187472, +
5.2e-118FFCP PHASE1:Hg19::chr12:8720206..8720211,-#_03d495d6c6a946792b82098cf3997b11p4@ENST00000542819
5.2e-118FFCP PHASE1:Hg19::chr1:27155357..27155367,+#_03d495d6c6a946792b82098cf3997b11p@chr1:27155357..27155367, +
5.2e-118FFCP PHASE1:Hg19::chr2:103039548..103039555,+#_03d495d6c6a946792b82098cf3997b11p9@IL18RAP
5.2e-118FFCP PHASE1:Hg19::chr2:103039589..103039596,+#_03d495d6c6a946792b82098cf3997b11p8@IL18RAP
5.2e-118FFCP PHASE1:Hg19::chr17:80187468..80187472,+#_03d495d6c6a946792b82098cf3997b11p@chr17:80187468..80187472, +
7.78e-118FFCP PHASE2:Hg19::chr13:21050019..21050027,-#_884a33c99b0459304383465557a433e9p@chr13:21050019..21050027, -
7.78e-118FFCP PHASE2:Hg19::chr14:88469399..88469404,-#_884a33c99b0459304383465557a433e9p@chr14:88469399..88469404, -
7.78e-118FFCP PHASE1:Hg19::chr13:21050019..21050027,-#_884a33c99b0459304383465557a433e9p@chr13:21050019..21050027, -
7.78e-118FFCP PHASE1:Hg19::chr14:88469399..88469404,-#_884a33c99b0459304383465557a433e9p@chr14:88469399..88469404, -
1.16e-117FFCP PHASE1:Hg19::chr1:208712347..208712354,+#_b2a05e79e896353c747e38436ad6c1f7p@chr1:208712347..208712354, +
1.16e-117FFCP PHASE2:Hg19::chr1:208712347..208712354,+#_b2a05e79e896353c747e38436ad6c1f7p@chr1:208712347..208712354, +
1.16e-117FFCP PHASE2:Hg19::chr21:37502917..37502925,+#_b2a05e79e896353c747e38436ad6c1f7p5@MEMO1P1
1.16e-117FFCP PHASE2:Hg19::chr2:102618480..102618529,+#_b2a05e79e896353c747e38436ad6c1f7p11@IL1R2
1.16e-117FFCP PHASE2:Hg19::chr2:103106370..103106380,+#_b2a05e79e896353c747e38436ad6c1f7p@chr2:103106370..103106380, +
1.16e-117FFCP PHASE2:Hg19::chr2:120967889..120967892,-#_b2a05e79e896353c747e38436ad6c1f7p@chr2:120967889..120967892, -
1.16e-117FFCP PHASE2:Hg19::chr2:70246139..70246146,-#_b2a05e79e896353c747e38436ad6c1f7p@chr2:70246139..70246146, -
1.16e-117FFCP PHASE1:Hg19::chr21:37502917..37502925,+#_b2a05e79e896353c747e38436ad6c1f7p5@MEMO1P1
1.16e-117FFCP PHASE1:Hg19::chr2:102618480..102618529,+#_b2a05e79e896353c747e38436ad6c1f7p11@IL1R2
1.16e-117FFCP PHASE1:Hg19::chr2:103106370..103106380,+#_b2a05e79e896353c747e38436ad6c1f7p@chr2:103106370..103106380, +