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CL:0002057

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Name:CD14-positive, CD16-negative classical monocyte
Namespace:FANTOM
Definition:"A monocyte that is CD14-positive, CD16-negative, CD64-positive, CD163-positive," [GOC:tfm, PMID:15615263, PMID:1706877, PMID:19689341]
Comments:Markers are associated with human monocytes.
Created by:tmeehan
Creation date:2010-06-05T08:25:41Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000860(classical monocyte),CL:0001054(CD14-positive monocyte)



Children


derives from:FF:0011101 (human CD14-positive monocytes - mock treated sample),FF:0011102 (human CD14-positive monocytes - treated with B-glucan sample),FF:0011103 (human CD14-positive monocytes - treated with BCG sample),FF:0011104 (human CD14-positive monocytes - treated with Candida sample),FF:0011105 (human CD14-positive monocytes - treated with Cryptococcus sample),FF:0011106 (human CD14-positive monocytes - treated with Group A streptococci sample),FF:0011108 (human CD14-positive monocytes - treated with lipopolysaccharide sample),FF:0011109 (human CD14-positive monocytes - treated with Salmonella sample),FF:0011111 (human CD14-positive CD16-negative Monocytes sample),FF:0011443 (CD14-positive monocytes - treated with IFN + N-hexane sample),FF:0011444 (CD14-positive monocytes - treated with Trehalose dimycolate (TDM) sample)
develops from:CL:0002397 (CD14-positive, CD16-positive monocyte)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002057 (CD14-positive, CD16-negative classical monocyte), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
2.95e-173FFCP PHASE1:Hg19::chr7:44661060..44661101,-#_22afa9f147739011778d4e78fb8e86fcp@chr7:44661060..44661101, -
2.95e-173FFCP PHASE2:Hg19::chr7:44661060..44661101,-#_22afa9f147739011778d4e78fb8e86fcp@chr7:44661060..44661101, -
5.66e-173FFCP PHASE2:Hg19::chr17:72628050..72628077,-#_5031cdabd9f16414c47b3aab75834961p@chr17:72628050..72628077, -
5.66e-173FFCP PHASE1:Hg19::chr17:72628050..72628077,-#_5031cdabd9f16414c47b3aab75834961p@chr17:72628050..72628077, -
3.48e-171FFCP PHASE1:Hg19::chr17:72607002..72607029,+#_1149a9858c74307203edeecc54cc7a0cp@chr17:72607002..72607029, +
3.48e-171FFCP PHASE2:Hg19::chr17:72607002..72607029,+#_1149a9858c74307203edeecc54cc7a0cp@chr17:72607002..72607029, +
2.61e-167FFCP PHASE2:Hg19::chr17:72606825..72606838,-#_920652704d9b1782694e5aed8be1dfd2p@chr17:72606825..72606838, -
2.61e-167FFCP PHASE1:Hg19::chr17:72606825..72606838,-#_920652704d9b1782694e5aed8be1dfd2p@chr17:72606825..72606838, -
1.41e-166FFCP PHASE1:Hg19::chr17:72607152..72607174,-#_b25b34adcdba43e53d77079996f2a541p@chr17:72607152..72607174, -
1.41e-166FFCP PHASE2:Hg19::chr17:72607152..72607174,-#_b25b34adcdba43e53d77079996f2a541p@chr17:72607152..72607174, -
1.31e-165FFCP PHASE2:Hg19::chr17:72607351..72607373,-#_789757a9a6ea839876e5c79936ca7dc4p@chr17:72607351..72607373, -
1.31e-165FFCP PHASE1:Hg19::chr17:72607351..72607373,-#_789757a9a6ea839876e5c79936ca7dc4p@chr17:72607351..72607373, -
8.2e-165FFCP PHASE1:Hg19::chr1:120593738..120593745,+#_0c72f755f17fa0abb439f6f7434a0ed1p@chr1:120593738..120593745, +
8.2e-165FFCP PHASE2:Hg19::chr1:120593738..120593745,+#_0c72f755f17fa0abb439f6f7434a0ed1p@chr1:120593738..120593745, +
1.7e-164FFCP PHASE2:Hg19::chr14:55249943..55249971,+#_ea7f750482939580e6991779295c4ffep@chr14:55249943..55249971, +
1.7e-164FFCP PHASE1:Hg19::chr14:55249943..55249971,+#_ea7f750482939580e6991779295c4ffep@chr14:55249943..55249971, +
6.24e-163FFCP PHASE2:Hg19::chr8:11754835..11754867,-#_1a85c21058f7f1478bf61d4708a18735p1@ENST00000525252
6.24e-163FFCP PHASE1:Hg19::chr8:11754835..11754867,-#_1a85c21058f7f1478bf61d4708a18735p1@ENST00000525252
2.9e-162FFCP PHASE1:Hg19::chr12:125197870..125197907,+#_02abadb934cf0b30e50a4b3f86adec77p@chr12:125197870..125197907, +
2.9e-162FFCP PHASE2:Hg19::chr12:125197870..125197907,+#_02abadb934cf0b30e50a4b3f86adec77p@chr12:125197870..125197907, +
2.93e-162FFCP PHASE1:Hg19::chr17:72606678..72606702,-#_d1e6c733ef1257015c390bffb7786e82p@chr17:72606678..72606702, -
2.93e-162FFCP PHASE2:Hg19::chr17:72606678..72606702,-#_d1e6c733ef1257015c390bffb7786e82p@chr17:72606678..72606702, -
3.23e-162FFCP PHASE2:Hg19::chr22:17717917..17717939,-#_6857c8912e1224a02cff65382760876fp@chr22:17717917..17717939, -
3.23e-162FFCP PHASE1:Hg19::chr22:17717917..17717939,-#_6857c8912e1224a02cff65382760876fp@chr22:17717917..17717939, -
4.13e-162FFCP PHASE1:Hg19::chr5:156534439..156534470,+#_fce8dfee879118a97da5c10f04da6abap@chr5:156534439..156534470, +
4.13e-162FFCP PHASE2:Hg19::chr5:156534439..156534470,+#_fce8dfee879118a97da5c10f04da6abap@chr5:156534439..156534470, +
1.23e-161FFCP PHASE1:Hg19::chr9:137300477..137300490,+#_08c074f810217b16ac511c064681a810p@chr9:137300477..137300490, +
1.23e-161FFCP PHASE2:Hg19::chr9:137300477..137300490,+#_08c074f810217b16ac511c064681a810p@chr9:137300477..137300490, +
6.16e-160FFCP PHASE2:Hg19::chr1:149901972..149901989,-#_2a06eae5b652091f329a5c1373925156p@chr1:149901972..149901989, -
6.16e-160FFCP PHASE1:Hg19::chr1:149901972..149901989,-#_2a06eae5b652091f329a5c1373925156p@chr1:149901972..149901989, -
3.22e-159FFCP PHASE1:Hg19::chr2:145276939..145276960,+#_3f00d95f06ca5b385a69efb8457d8c37p2@ZEB2-AS1
3.22e-159FFCP PHASE2:Hg19::chr2:145276939..145276960,+#_3f00d95f06ca5b385a69efb8457d8c37p2@ZEB2-AS1
4.01e-159FFCP PHASE2:Hg19::chr11:68847955..68847972,-#_a0870690a18bf5b9cbc943211a464bd7p@chr11:68847955..68847972, -
4.01e-159FFCP PHASE1:Hg19::chr11:68847955..68847972,-#_a0870690a18bf5b9cbc943211a464bd7p@chr11:68847955..68847972, -
1.14e-158FFCP PHASE1:Hg19::chr11:68847043..68847057,+#_3d51ff7e57cde12eef99a9417b9454d9p@chr11:68847043..68847057, +
1.14e-158FFCP PHASE2:Hg19::chr11:68847043..68847057,+#_3d51ff7e57cde12eef99a9417b9454d9p@chr11:68847043..68847057, +
5.8e-158FFCP PHASE2:Hg19::chr1:108592890..108592921,-#_074603cb9e2dc2482d7fa81189809bacp@chr1:108592890..108592921, -
5.8e-158FFCP PHASE1:Hg19::chr1:108592890..108592921,-#_074603cb9e2dc2482d7fa81189809bacp@chr1:108592890..108592921, -
2.44e-157FFCP PHASE2:Hg19::chr7:949680..949694,-#_49d606713c62ceb683137acf8cf1e396p@chr7:949680..949694, -
2.44e-157FFCP PHASE1:Hg19::chr7:949680..949694,-#_49d606713c62ceb683137acf8cf1e396p@chr7:949680..949694, -
4.86e-157FFCP PHASE1:Hg19::chr7:48009999..48010016,+#_61b7747d0f1e0d0f4bbb9a8310722492p@chr7:48009999..48010016, +
4.86e-157FFCP PHASE2:Hg19::chr7:48009999..48010016,+#_61b7747d0f1e0d0f4bbb9a8310722492p@chr7:48009999..48010016, +
5.49e-157FFCP PHASE2:Hg19::chr4:185314351..185314392,+#_a8344e94bd578151b51d05678c915435p@chr4:185314351..185314392, +
5.49e-157FFCP PHASE1:Hg19::chr4:185314351..185314392,+#_a8344e94bd578151b51d05678c915435p@chr4:185314351..185314392, +
8.29e-157FFCP PHASE1:Hg19::chr16:82229835..82229848,+#_ff512b36cbd0038c3e03c559b732c838p@chr16:82229835..82229848, +
8.29e-157FFCP PHASE2:Hg19::chr16:82229835..82229848,+#_ff512b36cbd0038c3e03c559b732c838p@chr16:82229835..82229848, +
2.1e-156FFCP PHASE1:Hg19::chr20:5634031..5634046,+#_570ce5639ca79857c6ce8fb41c270235p@chr20:5634031..5634046, +
2.1e-156FFCP PHASE2:Hg19::chr20:5634031..5634046,+#_570ce5639ca79857c6ce8fb41c270235p@chr20:5634031..5634046, +
4.29e-156FFCP PHASE1:Hg19::chr4:159731607..159731627,+#_367c3767ee4733ffa2686bef9a960566p@chr4:159731607..159731627, +
4.29e-156FFCP PHASE2:Hg19::chr4:159731607..159731627,+#_367c3767ee4733ffa2686bef9a960566p@chr4:159731607..159731627, +
1.66e-155FFCP PHASE1:Hg19::chr9:102353301..102353315,-#_ec2341076c23c741f54624dc03de1ec9p@chr9:102353301..102353315, -
1.66e-155FFCP PHASE2:Hg19::chr9:102353301..102353315,-#_ec2341076c23c741f54624dc03de1ec9p@chr9:102353301..102353315, -
3.6e-155FFCP PHASE2:Hg19::chr2:145450907..145450928,-#_b569d489d78b8ff52e104589fbef7423p@chr2:145450907..145450928, -
3.6e-155FFCP PHASE1:Hg19::chr2:145450907..145450928,-#_b569d489d78b8ff52e104589fbef7423p@chr2:145450907..145450928, -
3.76e-155FFCP PHASE2:Hg19::chr17:72628206..72628246,+#_e296b31fbff6497d31fe5386b1ae0f39p@chr17:72628206..72628246, +
3.76e-155FFCP PHASE1:Hg19::chr17:72628206..72628246,+#_e296b31fbff6497d31fe5386b1ae0f39p@chr17:72628206..72628246, +
1.6e-154FFCP PHASE1:Hg19::chr8:11755021..11755054,+#_6dbd73dc9cc72f5d9f7ed2ed3253d241p@chr8:11755021..11755054, +
1.6e-154FFCP PHASE2:Hg19::chr8:11755021..11755054,+#_6dbd73dc9cc72f5d9f7ed2ed3253d241p@chr8:11755021..11755054, +
1.99e-154FFCP PHASE2:Hg19::chr2:145421047..145421067,+#_9c15f60f2147874652002f8d89bce4cfp@chr2:145421047..145421067, +
1.99e-154FFCP PHASE1:Hg19::chr2:145421047..145421067,+#_9c15f60f2147874652002f8d89bce4cfp@chr2:145421047..145421067, +
4.18e-154FFCP PHASE1:Hg19::chr6:106348152..106348164,+#_66cf2afdb3d8ba2f13fb21a1475f7dd3p@chr6:106348152..106348164, +
4.18e-154FFCP PHASE2:Hg19::chr6:106348152..106348164,+#_66cf2afdb3d8ba2f13fb21a1475f7dd3p@chr6:106348152..106348164, +
9.99e-154FFCP PHASE1:Hg19::chr16:17469894..17469904,+#_c754605fb66ffca3f0515d81db029ef2p@chr16:17469894..17469904, +
9.99e-154FFCP PHASE2:Hg19::chr16:17469894..17469904,+#_c754605fb66ffca3f0515d81db029ef2p@chr16:17469894..17469904, +
1.29e-153FFCP PHASE2:Hg19::chr1:40006573..40006589,-#_01b631deab7019aa5e44083a2c9c816fp@chr1:40006573..40006589, -
1.29e-153FFCP PHASE1:Hg19::chr1:40006573..40006589,-#_01b631deab7019aa5e44083a2c9c816fp@chr1:40006573..40006589, -
1.38e-153FFCP PHASE1:Hg19::chr7:111720716..111720750,+#_04299f4de0a05a962a0f8496a23a5818p@chr7:111720716..111720750, +
1.38e-153FFCP PHASE2:Hg19::chr7:111720716..111720750,+#_04299f4de0a05a962a0f8496a23a5818p@chr7:111720716..111720750, +
1.95e-153FFCP PHASE1:Hg19::chr3:128943968..128943986,+#_33509fd9a650e9aefc093fbe0accef0fp@chr3:128943968..128943986, +
1.95e-153FFCP PHASE2:Hg19::chr3:128943968..128943986,+#_33509fd9a650e9aefc093fbe0accef0fp@chr3:128943968..128943986, +
3.44e-153FFCP PHASE2:Hg19::chr2:58339774..58339779,-#_44826a13236192cb3f9b0189f536e638p@chr2:58339774..58339779, -
3.44e-153FFCP PHASE1:Hg19::chr2:58339774..58339779,-#_44826a13236192cb3f9b0189f536e638p@chr2:58339774..58339779, -
4.04e-153FFCP PHASE2:Hg19::chr11:61737685..61737701,-#_e7896173d41d915780508f0396fa9627p@chr11:61737685..61737701, -
4.04e-153FFCP PHASE1:Hg19::chr11:61737685..61737701,-#_e7896173d41d915780508f0396fa9627p@chr11:61737685..61737701, -
5.57e-153FFCP PHASE1:Hg19::chr11:10921401..10921434,-#_7b58501ac869955f606505a72e90b50cp@chr11:10921401..10921434, -
5.57e-153FFCP PHASE2:Hg19::chr11:10921401..10921434,-#_7b58501ac869955f606505a72e90b50cp@chr11:10921401..10921434, -
2.07e-152FFCP PHASE2:Hg19::chr1:212659324..212659370,-#_15d17b9c25db6dea4ecce56facdd39ecp@chr1:212659324..212659370, -
2.07e-152FFCP PHASE1:Hg19::chr1:212659324..212659370,-#_15d17b9c25db6dea4ecce56facdd39ecp@chr1:212659324..212659370, -
2.23e-152FFCP PHASE1:Hg19::chr19:4812881..4812891,-#_466c6d2afffab95d23f6e2bfd49c2209p@chr19:4812881..4812891, -
2.23e-152FFCP PHASE2:Hg19::chr19:4812881..4812891,-#_466c6d2afffab95d23f6e2bfd49c2209p@chr19:4812881..4812891, -
3.99e-152FFCP PHASE2:Hg19::chr18:13577406..13577430,-#_f7f2ecd8177a2bb84c788a93c5817bda-, p@chr18:13577406..13577430
3.99e-152FFCP PHASE1:Hg19::chr18:13577406..13577430,-#_f7f2ecd8177a2bb84c788a93c5817bdap@chr18:13577406..13577430, -
4.17e-152FFCP PHASE1:Hg19::chr9:137264021..137264038,+#_215f5ed98df0395c0e14b084bc702180p@chr9:137264021..137264038, +
4.17e-152FFCP PHASE2:Hg19::chr9:137264021..137264038,+#_215f5ed98df0395c0e14b084bc702180p@chr9:137264021..137264038, +
4.44e-152FFCP PHASE2:Hg19::chr8:48173159..48173173,+#_0e63b3ff4e33b1710368c075ac67dbe1p6@KIAA0146
4.44e-152FFCP PHASE1:Hg19::chr8:48173159..48173173,+#_0e63b3ff4e33b1710368c075ac67dbe1p6@KIAA0146
6.49e-152FFCP PHASE1:Hg19::chr8:71452856..71452863,+#_eb9e14c2f38bd40e94e5f0614b19ae09p@chr8:71452856..71452863, +
6.49e-152FFCP PHASE2:Hg19::chr8:71452856..71452863,+#_eb9e14c2f38bd40e94e5f0614b19ae09p@chr8:71452856..71452863, +
6.68e-152FFCP PHASE2:Hg19::chr22:28065655..28065677,+#_f99d5a03c36c2e21a354128ad1efb046p@chr22:28065655..28065677, +
6.68e-152FFCP PHASE1:Hg19::chr22:28065655..28065677,+#_f99d5a03c36c2e21a354128ad1efb046p@chr22:28065655..28065677, +
1.17e-151FFCP PHASE1:Hg19::chr20:5626328..5626343,+#_15cbca1b83b320938ee67b0533410527p@chr20:5626328..5626343, +
1.17e-151FFCP PHASE2:Hg19::chr20:5626328..5626343,+#_15cbca1b83b320938ee67b0533410527p@chr20:5626328..5626343, +
2.27e-151FFCP PHASE2:Hg19::chr7:151622937..151622965,-#_cd29003e24afa0772ecf8a931ef1bf6cp@chr7:151622937..151622965, -
2.27e-151FFCP PHASE1:Hg19::chr7:151622937..151622965,-#_cd29003e24afa0772ecf8a931ef1bf6cp@chr7:151622937..151622965, -
6.5e-151FFCP PHASE2:Hg19::chr17:72635873..72635891,-#_58b89f66282a13ab3a4f86c342f343f8p@chr17:72635873..72635891, -
6.5e-151FFCP PHASE1:Hg19::chr17:72635873..72635891,-#_58b89f66282a13ab3a4f86c342f343f8p@chr17:72635873..72635891, -
1.04e-150FFCP PHASE1:Hg19::chr17:72636264..72636304,+#_7d7a2b0a1acd4361d4b06e92ae685383p@chr17:72636264..72636304, +
1.04e-150FFCP PHASE2:Hg19::chr17:72636264..72636304,+#_7d7a2b0a1acd4361d4b06e92ae685383p@chr17:72636264..72636304, +
1.28e-150FFCP PHASE2:Hg19::chr7:2814742..2814772,+#_cab6ca5bba5a24bf7ca4b7660deb8d23p@chr7:2814742..2814772, +
1.28e-150FFCP PHASE1:Hg19::chr7:2814742..2814772,+#_cab6ca5bba5a24bf7ca4b7660deb8d23p@chr7:2814742..2814772, +