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CL:0002092

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Name:bone marrow cell
Namespace:FANTOM
Definition:"A cell found in the bone marrow. This can include fibroblasts, macrophages, adipocytes, osteoblasts, osteoclasts, endothelial cells and hematopoietic cells." [GOC:tfm, ISBN:0618947256]
Xrefs:
links:

BTO:0004850

FMA:83621
Created by:tmeehan
Creation date:2010-07-22T04:48:15Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0001035(bone cell)
part_of:UBERON:0002371(bone marrow)



Children


is a:CL:0002540 (mesenchymal stem cell of the bone marrow),CL:1001610 (bone marrow hematopoietic cell)
derives from:FF:0000020 (human CD133-positive progenitor cell- bone marrow derived sample),FF:0100583 (bone marrow cancer cell sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002092 (bone marrow cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.33e-65FFCP PHASE2:Mm9::chr6:48992901..48992908,-#_d3a7586279dae6c3db5fa1e530b6b4c1p@chr6:48992901..48992908, -
1.33e-65FFCP PHASE1:Mm9::chr6:48992901..48992908,-#_d3a7586279dae6c3db5fa1e530b6b4c1-, p@chr6:48992901..48992908
6.04e-65FFCP PHASE2:Mm9::chr7:53967438..53967455,+#_8c4dc86b79c4b671b951a496ed34a4dbp@chr7:53967438..53967455, +
6.04e-65FFCP PHASE1:Mm9::chr7:53967438..53967455,+#_8c4dc86b79c4b671b951a496ed34a4dbp@chr7:53967438..53967455, +
4.9e-53FFCP PHASE2:Mm9::chr6:49001848..49001855,+#_5b3721343dc9890e60e32c0dd45759c9p@chr6:49001848..49001855, +
4.9e-53FFCP PHASE1:Mm9::chr6:49001848..49001855,+#_5b3721343dc9890e60e32c0dd45759c9p@chr6:49001848..49001855, +
2.47e-52FFCP PHASE2:Mm9::chr8:125950637..125950639,-#_7777d37304d68d582cb0a925a7d7a599p@chr8:125950637..125950639, -
2.47e-52FFCP PHASE1:Mm9::chr8:125950637..125950639,-#_7777d37304d68d582cb0a925a7d7a599p@chr8:125950637..125950639, -
3.69e-52FFCP PHASE2:Mm9::chr11:8475592..8475595,-#_52ac43dd35450c9e37b5d9f3bbde26eep@chr11:8475592..8475595, -
3.69e-52FFCP PHASE1:Mm9::chr11:8475592..8475595,-#_52ac43dd35450c9e37b5d9f3bbde26eep@chr11:8475592..8475595, -
5.51e-52FFCP PHASE1:Mm9::chr8:125956453..125956462,-#_855856eefd78e41399f840e86091e951p@chr8:125956453..125956462, -
5.51e-52FFCP PHASE1:Mm9::chr1:122401450..122401455,-#_855856eefd78e41399f840e86091e951p3@Marco
5.51e-52FFCP PHASE2:Mm9::chr8:125956453..125956462,-#_855856eefd78e41399f840e86091e951p@chr8:125956453..125956462, -
5.51e-52FFCP PHASE2:Mm9::chr1:122401450..122401455,-#_855856eefd78e41399f840e86091e951p3@Marco
1.18e-44FFCP PHASE1:Mm9::chr6:48995347..48995356,+#_9b40b73db33fea8e5ba55b4297cbe925p@chr6:48995347..48995356, +
1.18e-44FFCP PHASE1:Mm9::chr6:48997996..48998006,-#_9b40b73db33fea8e5ba55b4297cbe925p@chr6:48997996..48998006, -
1.18e-44FFCP PHASE2:Mm9::chr6:48995347..48995356,+#_9b40b73db33fea8e5ba55b4297cbe925p@chr6:48995347..48995356, +
1.18e-44FFCP PHASE1:Mm9::chr4:136452258..136452269,-#_9b40b73db33fea8e5ba55b4297cbe925p@chr4:136452258..136452269, -
1.18e-44FFCP PHASE2:Mm9::chr6:48997291..48997298,+#_9b40b73db33fea8e5ba55b4297cbe925p@chr6:48997291..48997298, +
1.18e-44FFCP PHASE1:Mm9::chr6:48995364..48995370,+#_9b40b73db33fea8e5ba55b4297cbe925p@chr6:48995364..48995370, +
1.18e-44FFCP PHASE2:Mm9::chr6:48997996..48998006,-#_9b40b73db33fea8e5ba55b4297cbe925p@chr6:48997996..48998006, -
1.18e-44FFCP PHASE2:Mm9::chr6:48995364..48995370,+#_9b40b73db33fea8e5ba55b4297cbe925p@chr6:48995364..48995370, +
1.18e-44FFCP PHASE2:Mm9::chr4:136452258..136452269,-#_9b40b73db33fea8e5ba55b4297cbe925-, p@chr4:136452258..136452269
1.18e-44FFCP PHASE1:Mm9::chr6:48997291..48997298,+#_9b40b73db33fea8e5ba55b4297cbe925p@chr6:48997291..48997298, +
1.66e-44FFCP PHASE1:Mm9::chr6:48997804..48997812,+#_22b6c32c78476f8ee918815d739b3608p@chr6:48997804..48997812, +
1.66e-44FFCP PHASE2:Mm9::chr6:48997804..48997812,+#_22b6c32c78476f8ee918815d739b3608p@chr6:48997804..48997812, +
3.27e-44FFCP PHASE1:Mm9::chr6:48995448..48995454,+#_6ffbda193d6f5afa022f61a7e41e2428p@chr6:48995448..48995454, +
3.27e-44FFCP PHASE2:Mm9::chr6:48995448..48995454,+#_6ffbda193d6f5afa022f61a7e41e2428p@chr6:48995448..48995454, +
6.41e-44FFCP PHASE1:Mm9::chr8:125956513..125956519,-#_3b56ee59800fabe4f19aa55dffbcacfdp@chr8:125956513..125956519, -
6.41e-44FFCP PHASE2:Mm9::chr11:69479320..69479327,-#_3b56ee59800fabe4f19aa55dffbcacfdp@chr11:69479320..69479327, -
6.41e-44FFCP PHASE2:Mm9::chr8:125951622..125951629,-#_3b56ee59800fabe4f19aa55dffbcacfd-, p@chr8:125951622..125951629
6.41e-44FFCP PHASE2:Mm9::chr8:125956513..125956519,-#_3b56ee59800fabe4f19aa55dffbcacfdp@chr8:125956513..125956519, -
6.41e-44FFCP PHASE1:Mm9::chr8:125951622..125951629,-#_3b56ee59800fabe4f19aa55dffbcacfdp@chr8:125951622..125951629, -
6.41e-44FFCP PHASE1:Mm9::chr11:69479320..69479327,-#_3b56ee59800fabe4f19aa55dffbcacfdp@chr11:69479320..69479327, -
8.97e-44FFCP PHASE2:Mm9::chr1:173159866..173159877,-#_c4bb3e8a4104668f92808da8b7a555f3p@chr1:173159866..173159877, -
8.97e-44FFCP PHASE2:Mm9::chr8:125956179..125956189,-#_c4bb3e8a4104668f92808da8b7a555f3p@chr8:125956179..125956189, -
8.97e-44FFCP PHASE1:Mm9::chr2:157944705..157944714,-#_c4bb3e8a4104668f92808da8b7a555f3p@chr2:157944705..157944714, -
8.97e-44FFCP PHASE1:Mm9::chr10:116715054..116715061,-#_c4bb3e8a4104668f92808da8b7a555f3p@chr10:116715054..116715061, -
8.97e-44FFCP PHASE2:Mm9::chr8:125952972..125952981,-#_c4bb3e8a4104668f92808da8b7a555f3p@chr8:125952972..125952981, -
8.97e-44FFCP PHASE2:Mm9::chr2:157944705..157944714,-#_c4bb3e8a4104668f92808da8b7a555f3p@chr2:157944705..157944714, -
8.97e-44FFCP PHASE1:Mm9::chr8:125956179..125956189,-#_c4bb3e8a4104668f92808da8b7a555f3p@chr8:125956179..125956189, -
8.97e-44FFCP PHASE1:Mm9::chr1:173159866..173159877,-#_c4bb3e8a4104668f92808da8b7a555f3p@chr1:173159866..173159877, -
8.97e-44FFCP PHASE2:Mm9::chr10:116715054..116715061,-#_c4bb3e8a4104668f92808da8b7a555f3p@chr10:116715054..116715061, -
8.97e-44FFCP PHASE1:Mm9::chr8:125952972..125952981,-#_c4bb3e8a4104668f92808da8b7a555f3p@chr8:125952972..125952981, -
1.25e-43FFCP PHASE2:Mm9::chr17:57501115..57501124,+#_9fd1f5e8102b1c579faafd13b278afd8p@chr17:57501115..57501124, +
1.25e-43FFCP PHASE1:Mm9::chr8:125953346..125953349,-#_9fd1f5e8102b1c579faafd13b278afd8p@chr8:125953346..125953349, -
1.25e-43FFCP PHASE1:Mm9::chr17:57501115..57501124,+#_9fd1f5e8102b1c579faafd13b278afd8p@chr17:57501115..57501124, +
1.25e-43FFCP PHASE2:Mm9::chr8:125953346..125953349,-#_9fd1f5e8102b1c579faafd13b278afd8p@chr8:125953346..125953349, -
1.75e-43FFCP PHASE1:Mm9::chr6:122805870..122805874,-#_2e0f47b012747b97ebc2848be2a20a0ep@chr6:122805870..122805874, -
1.75e-43FFCP PHASE2:Mm9::chr6:122805870..122805874,-#_2e0f47b012747b97ebc2848be2a20a0ep@chr6:122805870..122805874, -
1.7e-39FFCP PHASE2:Mm9::chr8:124830874..124830875,+#_baa57e674c47201d260d47f8f93353e0p@chr8:124830874..124830875, +
1.7e-39FFCP PHASE1:Mm9::chr8:124830874..124830875,+#_baa57e674c47201d260d47f8f93353e0p@chr8:124830874..124830875, +
4.15e-39FFCP PHASE2:Mm9::chr10:93014574..93014575,+#_cfe595c953c5b1622ba32e2199a84830p@chr10:93014574..93014575, +
4.15e-39FFCP PHASE1:Mm9::chr10:93014574..93014575,+#_cfe595c953c5b1622ba32e2199a84830p@chr10:93014574..93014575, +
1.17e-38FFCP PHASE2:Mm9::chr6:48992765..48992800,+#_fb93638c630a679f208a0f9d1a4d74d2p@chr6:48992765..48992800, +
1.17e-38FFCP PHASE2:Mm9::chr6:48992877..48992890,-#_fb93638c630a679f208a0f9d1a4d74d2p@chr6:48992877..48992890, -
1.17e-38FFCP PHASE1:Mm9::chr6:48992765..48992800,+#_fb93638c630a679f208a0f9d1a4d74d2p@chr6:48992765..48992800, +
1.17e-38FFCP PHASE1:Mm9::chr6:48992877..48992890,-#_fb93638c630a679f208a0f9d1a4d74d2-, p@chr6:48992877..48992890
2.79e-38FFCP PHASE2:Mm9::chr8:125952310..125952320,+#_dd424ca65cd4c1f23d66c256116659e9p@chr8:125952310..125952320, +
2.79e-38FFCP PHASE1:Mm9::chr8:125952310..125952320,+#_dd424ca65cd4c1f23d66c256116659e9p@chr8:125952310..125952320, +
3.73e-38FFCP PHASE1:Mm9::chr8:125952002..125952012,-#_648c4123fc4d52681daefa08e74601adp@chr8:125952002..125952012, -
3.73e-38FFCP PHASE1:Mm9::chr19:3941548..3941557,+#_648c4123fc4d52681daefa08e74601adp@chr19:3941548..3941557, +
3.73e-38FFCP PHASE2:Mm9::chr8:125951545..125951559,-#_648c4123fc4d52681daefa08e74601adp@chr8:125951545..125951559, -
3.73e-38FFCP PHASE1:Mm9::chr8:125951545..125951559,-#_648c4123fc4d52681daefa08e74601adp@chr8:125951545..125951559, -
3.73e-38FFCP PHASE2:Mm9::chr19:3941548..3941557,+#_648c4123fc4d52681daefa08e74601adp@chr19:3941548..3941557, +
3.73e-38FFCP PHASE2:Mm9::chr8:125952002..125952012,-#_648c4123fc4d52681daefa08e74601adp@chr8:125952002..125952012, -
6.64e-38FFCP PHASE1:Mm9::chr8:125951458..125951466,-#_720c8a3f2d1da633cbf148d2e77193fep@chr8:125951458..125951466, -
6.64e-38FFCP PHASE2:Mm9::chr6:82983194..82983205,-#_720c8a3f2d1da633cbf148d2e77193fep@chr6:82983194..82983205, -
6.64e-38FFCP PHASE2:Mm9::chr8:125956332..125956339,-#_720c8a3f2d1da633cbf148d2e77193fep@chr8:125956332..125956339, -
6.64e-38FFCP PHASE2:Mm9::chr8:125951458..125951466,-#_720c8a3f2d1da633cbf148d2e77193fep@chr8:125951458..125951466, -
6.64e-38FFCP PHASE1:Mm9::chr8:125956332..125956339,-#_720c8a3f2d1da633cbf148d2e77193fep@chr8:125956332..125956339, -
6.64e-38FFCP PHASE1:Mm9::chr6:82983194..82983205,-#_720c8a3f2d1da633cbf148d2e77193fep@chr6:82983194..82983205, -
8.86e-38FFCP PHASE1:Mm9::chr17:45733632..45733648,-#_0411044200b7041daddd4d2bf20f4935p@chr17:45733632..45733648, -
8.86e-38FFCP PHASE2:Mm9::chr17:45733632..45733648,-#_0411044200b7041daddd4d2bf20f4935p@chr17:45733632..45733648, -
3.67e-34FFCP PHASE1:Mm9::chr4:136452194..136452198,-#_c990cbdd3fa69491ef3ccc0e41d20124p@chr4:136452194..136452198, -
3.67e-34FFCP PHASE1:Mm9::chr6:48992884..48992893,+#_c990cbdd3fa69491ef3ccc0e41d20124p@chr6:48992884..48992893, +
3.67e-34FFCP PHASE2:Mm9::chr4:136436677..136436688,-#_c990cbdd3fa69491ef3ccc0e41d20124p@chr4:136436677..136436688, -
3.67e-34FFCP PHASE2:Mm9::chr4:136452194..136452198,-#_c990cbdd3fa69491ef3ccc0e41d20124-, p@chr4:136452194..136452198
3.67e-34FFCP PHASE2:Mm9::chr6:49006588..49006597,+#_c990cbdd3fa69491ef3ccc0e41d20124p@chr6:49006588..49006597, +
3.67e-34FFCP PHASE1:Mm9::chrX:20505898..20505909,-#_c990cbdd3fa69491ef3ccc0e41d20124p@chrX:20505898..20505909, -
3.67e-34FFCP PHASE2:Mm9::chr3:87067576..87067584,-#_c990cbdd3fa69491ef3ccc0e41d20124p3@Fcrls
3.67e-34FFCP PHASE2:Mm9::chrX:20505898..20505909,-#_c990cbdd3fa69491ef3ccc0e41d20124p@chrX:20505898..20505909, -
3.67e-34FFCP PHASE1:Mm9::chr6:48997958..48997979,-#_c990cbdd3fa69491ef3ccc0e41d20124p@chr6:48997958..48997979, -
3.67e-34FFCP PHASE1:Mm9::chr3:87067576..87067584,-#_c990cbdd3fa69491ef3ccc0e41d20124p3@Fcrls
3.67e-34FFCP PHASE1:Mm9::chr6:49006588..49006597,+#_c990cbdd3fa69491ef3ccc0e41d20124p@chr6:49006588..49006597, +
3.67e-34FFCP PHASE2:Mm9::chr3:87067625..87067636,-#_c990cbdd3fa69491ef3ccc0e41d20124p2@Fcrls
3.67e-34FFCP PHASE2:Mm9::chr6:48992884..48992893,+#_c990cbdd3fa69491ef3ccc0e41d20124p@chr6:48992884..48992893, +
3.67e-34FFCP PHASE2:Mm9::chr6:48997958..48997979,-#_c990cbdd3fa69491ef3ccc0e41d20124p@chr6:48997958..48997979, -
3.67e-34FFCP PHASE1:Mm9::chr4:136436677..136436688,-#_c990cbdd3fa69491ef3ccc0e41d20124p@chr4:136436677..136436688, -
3.67e-34FFCP PHASE1:Mm9::chr3:87067625..87067636,-#_c990cbdd3fa69491ef3ccc0e41d20124p2@Fcrls
6.12e-34FFCP PHASE1:Mm9::chr5:24046758..24046768,-#_d143cf1f740bf0fb79efc2a1c6083da1p3@Asb10
6.12e-34FFCP PHASE1:Mm9::chr11:69478859..69478867,-#_d143cf1f740bf0fb79efc2a1c6083da1p@chr11:69478859..69478867, -
6.12e-34FFCP PHASE2:Mm9::chr5:24046758..24046768,-#_d143cf1f740bf0fb79efc2a1c6083da1p3@Asb10
6.12e-34FFCP PHASE2:Mm9::chr11:69478859..69478867,-#_d143cf1f740bf0fb79efc2a1c6083da1p@chr11:69478859..69478867, -
1.31e-33FFCP PHASE2:Mm9::chr1:173164773..173164781,-#_c2cc61e7974f873eb55f156bbcd3b248p3@Fcer1g
1.31e-33FFCP PHASE1:Mm9::chr1:173164773..173164781,-#_c2cc61e7974f873eb55f156bbcd3b248p3@Fcer1g
1.69e-33FFCP PHASE1:Mm9::chr14:73572700..73572716,+#_e77076e0fdb83a602ca815ce602b620ep@chr14:73572700..73572716, +
1.69e-33FFCP PHASE2:Mm9::chr14:73572700..73572716,+#_e77076e0fdb83a602ca815ce602b620e+, p@chr14:73572700..73572716
3.61e-33FFCP PHASE1:Mm9::chr19:11679318..11679323,-#_529ef28c86f2aca88f43c12532d11e61p6@Ms4a6d
3.61e-33FFCP PHASE2:Mm9::chr19:11679318..11679323,-#_529ef28c86f2aca88f43c12532d11e61p6@Ms4a6d