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CL:0002541

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Name:chorionic membrane mesenchymal stem cell
Namespace:FANTOM
Definition:"A mesenchymal stem cell of the chorionic membrane." [GOC:tfm]
Created by:tmeehan
Creation date:2011-02-28T03:04:35Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000134(mesenchymal cell),CL:0000349(extraembryonic cell)
part_of:UBERON:0003124(chorion)



Children


derives from:FF:0000038 (human chorionic membrane stem cell sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002541 (chorionic membrane mesenchymal stem cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
2.79e-195FFCP PHASE2:Hg19::chr7:150554537..150554542,+#_286ce7e7f1e48aa3d64b8a52f279a2ebp24@ABP1
2.79e-195FFCP PHASE2:Hg19::chr19:52294756..52294758,-#_286ce7e7f1e48aa3d64b8a52f279a2ebp@chr19:52294756..52294758, -
2.79e-195FFCP PHASE1:Hg19::chr10:134275596..134275597,+#_286ce7e7f1e48aa3d64b8a52f279a2ebp@chr10:134275596..134275597, +
2.79e-195FFCP PHASE1:Hg19::chr11:76366237..76366246,+#_286ce7e7f1e48aa3d64b8a52f279a2ebp@chr11:76366237..76366246, +
2.79e-195FFCP PHASE1:Hg19::chr2:216693832..216693839,-#_286ce7e7f1e48aa3d64b8a52f279a2ebp@chr2:216693832..216693839, -
2.79e-195FFCP PHASE2:Hg19::chr2:216693832..216693839,-#_286ce7e7f1e48aa3d64b8a52f279a2eb-, p@chr2:216693832..216693839
2.79e-195FFCP PHASE2:Hg19::chr14:77950741..77950750,-#_286ce7e7f1e48aa3d64b8a52f279a2ebp10@ISM2
2.79e-195FFCP PHASE1:Hg19::chr22:32957467..32957470,+#_286ce7e7f1e48aa3d64b8a52f279a2eb+, p@chr22:32957467..32957470
2.79e-195FFCP PHASE2:Hg19::chr22:32957467..32957470,+#_286ce7e7f1e48aa3d64b8a52f279a2ebp@chr22:32957467..32957470, +
2.79e-195FFCP PHASE2:Hg19::chr10:134275596..134275597,+#_286ce7e7f1e48aa3d64b8a52f279a2ebp@chr10:134275596..134275597, +
2.79e-195FFCP PHASE1:Hg19::chr7:150554537..150554542,+#_286ce7e7f1e48aa3d64b8a52f279a2ebp24@ABP1
2.79e-195FFCP PHASE1:Hg19::chr19:52294756..52294758,-#_286ce7e7f1e48aa3d64b8a52f279a2ebp@chr19:52294756..52294758, -
2.79e-195FFCP PHASE2:Hg19::chr19:17423022..17423028,+#_286ce7e7f1e48aa3d64b8a52f279a2ebp@chr19:17423022..17423028, +
2.79e-195FFCP PHASE1:Hg19::chr14:77950741..77950750,-#_286ce7e7f1e48aa3d64b8a52f279a2ebp10@ISM2
2.79e-195FFCP PHASE2:Hg19::chr11:76366237..76366246,+#_286ce7e7f1e48aa3d64b8a52f279a2ebp@chr11:76366237..76366246, +
2.79e-195FFCP PHASE1:Hg19::chr19:17423022..17423028,+#_286ce7e7f1e48aa3d64b8a52f279a2ebp@chr19:17423022..17423028, +
3.27e-147FFCP PHASE2:Hg19::chr17:79910718..79910728,-#_03898be948a920403fad41c8af699b48p@chr17:79910718..79910728, -
3.27e-147FFCP PHASE1:Hg19::chr17:79910718..79910728,-#_03898be948a920403fad41c8af699b48p@chr17:79910718..79910728, -
3.27e-147FFCP PHASE1:Hg19::chr1:103299100..103299144,+#_03898be948a920403fad41c8af699b48p@chr1:103299100..103299144, +
3.27e-147FFCP PHASE2:Hg19::chr1:103299100..103299144,+#_03898be948a920403fad41c8af699b48p@chr1:103299100..103299144, +
5.41e-147FFCP PHASE2:Hg19::chr2:25862142..25862153,-#_40a50542347b31ee6de3dd9deeb17dbfp19@DTNB
5.41e-147FFCP PHASE1:Hg19::chr3:194445234..194445270,+#_40a50542347b31ee6de3dd9deeb17dbfp@chr3:194445234..194445270, +
5.41e-147FFCP PHASE1:Hg19::chr2:25862142..25862153,-#_40a50542347b31ee6de3dd9deeb17dbfp19@DTNB
5.41e-147FFCP PHASE1:Hg19::chr20:61867326..61867336,+#_40a50542347b31ee6de3dd9deeb17dbfp4@BIRC7
5.41e-147FFCP PHASE1:Hg19::chr7:150554839..150554849,+#_40a50542347b31ee6de3dd9deeb17dbfp11@ABP1
5.41e-147FFCP PHASE2:Hg19::chr20:61867326..61867336,+#_40a50542347b31ee6de3dd9deeb17dbfp4@BIRC7
5.41e-147FFCP PHASE2:Hg19::chr7:150554839..150554849,+#_40a50542347b31ee6de3dd9deeb17dbfp11@ABP1
5.41e-147FFCP PHASE2:Hg19::chr3:194445234..194445270,+#_40a50542347b31ee6de3dd9deeb17dbfp@chr3:194445234..194445270, +
8.98e-131FFCP PHASE1:Hg19::chr11:57176838..57176845,-#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr11:57176838..57176845, -
8.98e-131FFCP PHASE1:Hg19::chrX:110507128..110507134,-#_c0d1d37158eebc81a69dbd3e6b80ea92p8@CAPN6
8.98e-131FFCP PHASE2:Hg19::chr13:28961673..28961683,-#_c0d1d37158eebc81a69dbd3e6b80ea92p16@FLT1
8.98e-131FFCP PHASE1:Hg19::chr13:28979951..28979962,-#_c0d1d37158eebc81a69dbd3e6b80ea92p13@FLT1
8.98e-131FFCP PHASE2:Hg19::chr11:76366247..76366254,+#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr11:76366247..76366254, +
8.98e-131FFCP PHASE1:Hg19::chr3:46069144..46069152,-#_c0d1d37158eebc81a69dbd3e6b80ea92p5@XCR1
8.98e-131FFCP PHASE2:Hg19::chr1:176525848..176525853,+#_c0d1d37158eebc81a69dbd3e6b80ea92p23@PAPPA2
8.98e-131FFCP PHASE1:Hg19::chr22:37952104..37952119,+#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr22:37952104..37952119, +
8.98e-131FFCP PHASE1:Hg19::chr13:29004205..29004214,-#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr13:29004205..29004214, -
8.98e-131FFCP PHASE2:Hg19::chr20:11677855..11677865,-#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr20:11677855..11677865, -
8.98e-131FFCP PHASE1:Hg19::chr11:57156666..57156671,+#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr11:57156666..57156671, +
8.98e-131FFCP PHASE2:Hg19::chrX:110507128..110507134,-#_c0d1d37158eebc81a69dbd3e6b80ea92p8@CAPN6
8.98e-131FFCP PHASE2:Hg19::chr5:157345802..157345806,-#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr5:157345802..157345806, -
8.98e-131FFCP PHASE2:Hg19::chr13:28979951..28979962,-#_c0d1d37158eebc81a69dbd3e6b80ea92p13@FLT1
8.98e-131FFCP PHASE1:Hg19::chr14:34688978..34688987,-#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr14:34688978..34688987, -
8.98e-131FFCP PHASE1:Hg19::chr1:176708805..176708814,+#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr1:176708805..176708814, +
8.98e-131FFCP PHASE2:Hg19::chr14:34516082..34516087,-#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr14:34516082..34516087, -
8.98e-131FFCP PHASE1:Hg19::chr20:11677855..11677865,-#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr20:11677855..11677865, -
8.98e-131FFCP PHASE1:Hg19::chr3:15493229..15493233,-#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr3:15493229..15493233, -
8.98e-131FFCP PHASE1:Hg19::chr11:76366247..76366254,+#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr11:76366247..76366254, +
8.98e-131FFCP PHASE2:Hg19::chr13:29004205..29004214,-#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr13:29004205..29004214, -
8.98e-131FFCP PHASE1:Hg19::chr13:28971118..28971128,-#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr13:28971118..28971128, -
8.98e-131FFCP PHASE1:Hg19::chr1:176760549..176760561,+#_c0d1d37158eebc81a69dbd3e6b80ea92p19@PAPPA2
8.98e-131FFCP PHASE1:Hg19::chr5:157345802..157345806,-#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr5:157345802..157345806, -
8.98e-131FFCP PHASE1:Hg19::chr13:28959108..28959115,-#_c0d1d37158eebc81a69dbd3e6b80ea92p25@FLT1
8.98e-131FFCP PHASE2:Hg19::chr11:57176838..57176845,-#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr11:57176838..57176845, -
8.98e-131FFCP PHASE1:Hg19::chr2:16804236..16804248,-#_c0d1d37158eebc81a69dbd3e6b80ea92p9@FAM49A
8.98e-131FFCP PHASE1:Hg19::chr22:33000436..33000460,-#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr22:33000436..33000460, -
8.98e-131FFCP PHASE2:Hg19::chr13:28971118..28971128,-#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr13:28971118..28971128, -
8.98e-131FFCP PHASE1:Hg19::chr1:176525848..176525853,+#_c0d1d37158eebc81a69dbd3e6b80ea92p23@PAPPA2
8.98e-131FFCP PHASE2:Hg19::chr7:46073181..46073190,+#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr7:46073181..46073190, +
8.98e-131FFCP PHASE2:Hg19::chr3:46069144..46069152,-#_c0d1d37158eebc81a69dbd3e6b80ea92p5@XCR1
8.98e-131FFCP PHASE2:Hg19::chr22:33000436..33000460,-#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr22:33000436..33000460, -
8.98e-131FFCP PHASE2:Hg19::chr13:28959108..28959115,-#_c0d1d37158eebc81a69dbd3e6b80ea92p25@FLT1
8.98e-131FFCP PHASE2:Hg19::chr11:57156666..57156671,+#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr11:57156666..57156671, +
8.98e-131FFCP PHASE2:Hg19::chr22:37952104..37952119,+#_c0d1d37158eebc81a69dbd3e6b80ea92+, p@chr22:37952104..37952119
8.98e-131FFCP PHASE2:Hg19::chr14:34688978..34688987,-#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr14:34688978..34688987, -
8.98e-131FFCP PHASE1:Hg19::chr13:28961673..28961683,-#_c0d1d37158eebc81a69dbd3e6b80ea92p16@FLT1
8.98e-131FFCP PHASE2:Hg19::chr1:176708805..176708814,+#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr1:176708805..176708814, +
8.98e-131FFCP PHASE2:Hg19::chr2:16804236..16804248,-#_c0d1d37158eebc81a69dbd3e6b80ea92p9@FAM49A
8.98e-131FFCP PHASE1:Hg19::chr7:46073181..46073190,+#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr7:46073181..46073190, +
8.98e-131FFCP PHASE1:Hg19::chr14:34516082..34516087,-#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr14:34516082..34516087, -
8.98e-131FFCP PHASE2:Hg19::chr1:176760549..176760561,+#_c0d1d37158eebc81a69dbd3e6b80ea92p19@PAPPA2
8.98e-131FFCP PHASE2:Hg19::chr3:15493229..15493233,-#_c0d1d37158eebc81a69dbd3e6b80ea92p@chr3:15493229..15493233, -
2.33e-118FFCP PHASE1:Hg19::chr16:30123873..30123913,-#_44eab95e14a98228e288640e42c74cedp@chr16:30123873..30123913, -
2.33e-118FFCP PHASE2:Hg19::chr4:10616734..10616776,+#_44eab95e14a98228e288640e42c74cedp@chr4:10616734..10616776, +
2.33e-118FFCP PHASE1:Hg19::chr1:43987714..43987727,+#_44eab95e14a98228e288640e42c74cedp@chr1:43987714..43987727, +
2.33e-118FFCP PHASE1:Hg19::chr4:10616734..10616776,+#_44eab95e14a98228e288640e42c74cedp@chr4:10616734..10616776, +
2.33e-118FFCP PHASE1:Hg19::chr14:77951114..77951128,-#_44eab95e14a98228e288640e42c74cedp9@ISM2
2.33e-118FFCP PHASE1:Hg19::chr7:150553527..150553540,+#_44eab95e14a98228e288640e42c74cedp10@ABP1
2.33e-118FFCP PHASE2:Hg19::chr17:79917433..79917443,-#_44eab95e14a98228e288640e42c74cedp@chr17:79917433..79917443, -
2.33e-118FFCP PHASE2:Hg19::chr7:150553527..150553540,+#_44eab95e14a98228e288640e42c74cedp10@ABP1
2.33e-118FFCP PHASE1:Hg19::chr1:120056675..120056682,+#_44eab95e14a98228e288640e42c74cedp@chr1:120056675..120056682, +
2.33e-118FFCP PHASE2:Hg19::chr1:43987714..43987727,+#_44eab95e14a98228e288640e42c74cedp@chr1:43987714..43987727, +
2.33e-118FFCP PHASE1:Hg19::chr17:79917433..79917443,-#_44eab95e14a98228e288640e42c74cedp@chr17:79917433..79917443, -
2.33e-118FFCP PHASE2:Hg19::chr14:77951114..77951128,-#_44eab95e14a98228e288640e42c74cedp9@ISM2
2.33e-118FFCP PHASE2:Hg19::chr1:120056675..120056682,+#_44eab95e14a98228e288640e42c74ced+, p@chr1:120056675..120056682
2.33e-118FFCP PHASE2:Hg19::chrX:56057971..56057978,-#_44eab95e14a98228e288640e42c74cedp@chrX:56057971..56057978, -
2.33e-118FFCP PHASE1:Hg19::chrX:56057971..56057978,-#_44eab95e14a98228e288640e42c74cedp@chrX:56057971..56057978, -
2.33e-118FFCP PHASE2:Hg19::chr16:30123873..30123913,-#_44eab95e14a98228e288640e42c74cedp@chr16:30123873..30123913, -
3.48e-118FFCP PHASE1:Hg19::chr1:43987687..43987701,+#_8339c753644305cf3dcfb7d8d3f021a5p@chr1:43987687..43987701, +
3.48e-118FFCP PHASE1:Hg19::chr6:169498853..169498877,+#_8339c753644305cf3dcfb7d8d3f021a5+, p@chr6:169498853..169498877
3.48e-118FFCP PHASE2:Hg19::chr1:43987687..43987701,+#_8339c753644305cf3dcfb7d8d3f021a5p@chr1:43987687..43987701, +
3.48e-118FFCP PHASE2:Hg19::chr6:169498853..169498877,+#_8339c753644305cf3dcfb7d8d3f021a5p@chr6:169498853..169498877, +
5.2e-118FFCP PHASE2:Hg19::chr7:150554953..150554959,+#_fd8d01742f5395b11e18dcc3cb6275cbp18@ABP1
5.2e-118FFCP PHASE2:Hg19::chr2:86094764..86094796,-#_fd8d01742f5395b11e18dcc3cb6275cbp9@ST3GAL5
5.2e-118FFCP PHASE1:Hg19::chr19:4234683..4234696,+#_fd8d01742f5395b11e18dcc3cb6275cbp@chr19:4234683..4234696, +
5.2e-118FFCP PHASE1:Hg19::chr14:77965643..77965654,-#_fd8d01742f5395b11e18dcc3cb6275cbp8@ISM2
5.2e-118FFCP PHASE1:Hg19::chr2:86094764..86094796,-#_fd8d01742f5395b11e18dcc3cb6275cbp9@ST3GAL5
5.2e-118FFCP PHASE2:Hg19::chr19:4234683..4234696,+#_fd8d01742f5395b11e18dcc3cb6275cbp@chr19:4234683..4234696, +
5.2e-118FFCP PHASE1:Hg19::chr14:34509180..34509193,+#_fd8d01742f5395b11e18dcc3cb6275cbp1@ENST00000555922
5.2e-118FFCP PHASE2:Hg19::chr14:77965643..77965654,-#_fd8d01742f5395b11e18dcc3cb6275cbp8@ISM2