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DOID:2513

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Name:basal cell carcinoma
Namespace:FANTOM
Xrefs:
links:

MSH:D002280
NCI:C2921
SNOMEDCT_2010_1_31:127570002
SNOMEDCT_2010_1_31:1338007
SNOMEDCT_2010_1_31:154507009
SNOMEDCT_2010_1_31:188083002
SNOMEDCT_2010_1_31:189572008
SNOMEDCT_2010_1_31:189573003
SNOMEDCT_2010_1_31:189574009
SNOMEDCT_2010_1_31:252995000
SNOMEDCT_2010_1_31:254701007
SNOMEDCT_2010_1_31:269582000
SNOMEDCT_2010_1_31:275265005
SNOMEDCT_2010_1_31:30649006
SNOMEDCT_2010_1_31:399049001
UMLS_CUI:C0007117
UMLS_CUI:C0206710

UMLS_CUI:C1368295
Synonyms: "Basal cell cancer" EXACT [NCI2004_11_17:C2921]
"basal cell carcinoma" EXACT [CSP2005:2000-2719]
"Basal cell carcinoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:1338007]
"Basal cell carcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189573003]
"BASAL CELL carcinoma OF SKIN" EXACT [MTH:100]
"Basal cell carcinoma of skin (disorder)" EXACT [SNOMEDCT_2005_07_31:254701007]
"basal cell neoplasm" EXACT []
"Basal cell neoplasm (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189572008]
"Basal cell neoplasm NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189574009]
"Basal cell tumor" EXACT [NCI2004_11_17:C3784]
"Basal cell tumor (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:30649006]
"Epithelioma basal cell (disorder)" EXACT [SNOMEDCT_2005_07_31:275265005]
"malignant Basal cell neoplasm" EXACT [NCI2004_11_17:C7586]
"malignant basal cell tumor" EXACT []
"malignant basal cell tumor (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:252995000]
"Rodent ulcer" EXACT [SNOMEDCT_2005_07_31:188083002]
"Rodent ulcer" EXACT [SNOMEDCT_2005_07_31:269582000]
"Rodent ulcer" EXACT [SNOMEDCT_2005_07_31:399049001]
"Rodent ulcer" EXACT [SNOMEDCT_2005_07_31:154507009]
Alt_id: DOID:4275
DOID:4276

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:3451(skin carcinoma)



Children


is a:FF:10702-109G9 (basal cell carcinoma cell line:TE 354.T)


Ontology Tree: Loaded from BioPortal

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:2513 (basal cell carcinoma), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr10:69686723..69686726,-#_648d77bcb2c14c9096d85997fa925302p@chr10:69686723..69686726, -
5.42e-195FFCP PHASE2:Hg19::chr10:69686723..69686726,-#_648d77bcb2c14c9096d85997fa925302p@chr10:69686723..69686726, -
2.55e-98FFCP PHASE2:Hg19::chr18:22080172..22080183,+#_f24a6e710119930ae7553d051ea2f51ap@chr18:22080172..22080183, +
2.55e-98FFCP PHASE1:Hg19::chr18:22080172..22080183,+#_f24a6e710119930ae7553d051ea2f51ap@chr18:22080172..22080183, +
2.39e-66FFCP PHASE2:Hg19::chr3:81671636..81671662,-#_af63cae282677013d52cea3ebd40f789p@chr3:81671636..81671662, -
2.39e-66FFCP PHASE1:Hg19::chr3:81671636..81671662,-#_af63cae282677013d52cea3ebd40f789p@chr3:81671636..81671662, -
2.39e-66FFCP PHASE1:Hg19::chr21:37376927..37376938,+#_af63cae282677013d52cea3ebd40f789p@chr21:37376927..37376938, +
2.39e-66FFCP PHASE2:Hg19::chr21:37376927..37376938,+#_af63cae282677013d52cea3ebd40f789p@chr21:37376927..37376938, +
4.66e-66FFCP PHASE1:Hg19::chr11:101454246..101454255,-#_745650e230fc92ba89ba4d1d33c87307p11@TRPC6
4.66e-66FFCP PHASE1:Hg19::chr3:177508111..177508119,-#_745650e230fc92ba89ba4d1d33c87307p@chr3:177508111..177508119, -
4.66e-66FFCP PHASE2:Hg19::chr11:101454246..101454255,-#_745650e230fc92ba89ba4d1d33c87307p11@TRPC6
4.66e-66FFCP PHASE2:Hg19::chr3:177508111..177508119,-#_745650e230fc92ba89ba4d1d33c87307p@chr3:177508111..177508119, -
1.46e-50FFCP PHASE1:Hg19::chr4:73248974..73249005,+#_ca8e8d9843d67a84fbad727965894db8p@chr4:73248974..73249005, +
1.46e-50FFCP PHASE2:Hg19::chr4:73248974..73249005,+#_ca8e8d9843d67a84fbad727965894db8p@chr4:73248974..73249005, +
2.42e-50FFCP PHASE1:Hg19::chr3:50367252..50367278,-#_bfd6c977107d4a08d7b106c9adde1d5b-, p@chr3:50367252..50367278
2.42e-50FFCP PHASE1:Hg19::chr16:66906996..66906997,-#_bfd6c977107d4a08d7b106c9adde1d5bp@chr16:66906996..66906997, -
2.42e-50FFCP PHASE2:Hg19::chr16:66906996..66906997,-#_bfd6c977107d4a08d7b106c9adde1d5bp@chr16:66906996..66906997, -
2.42e-50FFCP PHASE2:Hg19::chr6:152792772..152792787,-#_bfd6c977107d4a08d7b106c9adde1d5bp@chr6:152792772..152792787, -
2.42e-50FFCP PHASE1:Hg19::chr6:152792772..152792787,-#_bfd6c977107d4a08d7b106c9adde1d5bp@chr6:152792772..152792787, -
2.42e-50FFCP PHASE2:Hg19::chr3:50367252..50367278,-#_bfd6c977107d4a08d7b106c9adde1d5bp@chr3:50367252..50367278, -
6.58e-50FFCP PHASE1:Hg19::chr10:92754303..92754313,+#_5941dec52c59144b28be6d252e64f215p2@ENST00000412362
6.58e-50FFCP PHASE2:Hg19::chr10:92754303..92754313,+#_5941dec52c59144b28be6d252e64f215p2@ENST00000412362
6.58e-50FFCP PHASE2:Hg19::chr5:14437967..14437970,+#_5941dec52c59144b28be6d252e64f215p@chr5:14437967..14437970, +
6.58e-50FFCP PHASE1:Hg19::chr5:14437967..14437970,+#_5941dec52c59144b28be6d252e64f215p@chr5:14437967..14437970, +
6.62e-41FFCP PHASE2:Hg19::chr6:132455433..132455444,+#_84f50f04aa4d1205a310cfdafbd0f387p4@ENST00000443303
6.62e-41FFCP PHASE2:Hg19::chr5:11385573..11385583,-#_84f50f04aa4d1205a310cfdafbd0f387p47@CTNND2
6.62e-41FFCP PHASE1:Hg19::chr5:11385573..11385583,-#_84f50f04aa4d1205a310cfdafbd0f387p47@CTNND2
6.62e-41FFCP PHASE1:Hg19::chr4:75180763..75180777,+#_84f50f04aa4d1205a310cfdafbd0f387p@chr4:75180763..75180777, +
6.62e-41FFCP PHASE2:Hg19::chr4:75180763..75180777,+#_84f50f04aa4d1205a310cfdafbd0f387p@chr4:75180763..75180777, +
6.62e-41FFCP PHASE1:Hg19::chr6:132455433..132455444,+#_84f50f04aa4d1205a310cfdafbd0f387p4@ENST00000443303
1.48e-40FFCP PHASE2:Hg19::chr15:34522001..34522013,+#_017fd167d8cf233465ef6764559eba36p@chr15:34522001..34522013, +
1.48e-40FFCP PHASE1:Hg19::chr10:32111231..32111276,-#_017fd167d8cf233465ef6764559eba36p@chr10:32111231..32111276, -
1.48e-40FFCP PHASE1:Hg19::chr15:34522001..34522013,+#_017fd167d8cf233465ef6764559eba36p@chr15:34522001..34522013, +
1.48e-40FFCP PHASE2:Hg19::chr10:32111231..32111276,-#_017fd167d8cf233465ef6764559eba36p@chr10:32111231..32111276, -
2.21e-40FFCP PHASE1:Hg19::chr2:170664937..170664947,+#_7141ac7c37b1217d8501b8ef9b90e966p13@SSB
2.21e-40FFCP PHASE2:Hg19::chr2:170664937..170664947,+#_7141ac7c37b1217d8501b8ef9b90e966p13@SSB
2.21e-40FFCP PHASE1:Hg19::chr4:188508175..188508193,-#_7141ac7c37b1217d8501b8ef9b90e966p@chr4:188508175..188508193, -
2.21e-40FFCP PHASE2:Hg19::chr1:198125486..198125496,+#_7141ac7c37b1217d8501b8ef9b90e966p@chr1:198125486..198125496, +
2.21e-40FFCP PHASE1:Hg19::chr1:198125486..198125496,+#_7141ac7c37b1217d8501b8ef9b90e966p@chr1:198125486..198125496, +
2.21e-40FFCP PHASE2:Hg19::chr4:188508175..188508193,-#_7141ac7c37b1217d8501b8ef9b90e966p@chr4:188508175..188508193, -
1.84e-34FFCP PHASE1:Hg19::chr10:92754444..92754453,+#_24b23d2d0181a616235f6b53c6a8266cp3@ENST00000412362
1.84e-34FFCP PHASE2:Hg19::chr10:92754444..92754453,+#_24b23d2d0181a616235f6b53c6a8266cp3@ENST00000412362
2.58e-34FFCP PHASE1:Hg19::chr11:132814140..132814166,-#_2ecbc77460a89b00cf295530cf4c1cacp15@OPCML
2.58e-34FFCP PHASE2:Hg19::chr11:132814140..132814166,-#_2ecbc77460a89b00cf295530cf4c1cacp15@OPCML
2.58e-34FFCP PHASE1:Hg19::chr4:138585909..138585915,+#_2ecbc77460a89b00cf295530cf4c1cacp@chr4:138585909..138585915, +
2.58e-34FFCP PHASE2:Hg19::chr4:138585909..138585915,+#_2ecbc77460a89b00cf295530cf4c1cacp@chr4:138585909..138585915, +
3.61e-34FFCP PHASE1:Hg19::chr3:177508140..177508151,-#_c3ae2e3e46c544ec4b3d6c49a401150cp@chr3:177508140..177508151, -
3.61e-34FFCP PHASE2:Hg19::chr3:177508140..177508151,-#_c3ae2e3e46c544ec4b3d6c49a401150cp@chr3:177508140..177508151, -
5.05e-34FFCP PHASE2:Hg19::chr2:228246460..228246471,-#_0c7a12afb2d46ebc69f752788a1d802ap4@TM4SF20
5.05e-34FFCP PHASE1:Hg19::chr2:228246460..228246471,-#_0c7a12afb2d46ebc69f752788a1d802ap4@TM4SF20
9.99e-30FFCP PHASE2:Hg19::chr10:119302113..119302122,-#_077ae81bbd3ec57f3390f8ce668bd291p13@EMX2OS
9.99e-30FFCP PHASE1:Hg19::chr10:119302113..119302122,-#_077ae81bbd3ec57f3390f8ce668bd291p13@EMX2OS
1.33e-29FFCP PHASE1:Hg19::chr11:132814188..132814199,-#_e9349ab790ac68b2e74aa5aca8ede97bp@chr11:132814188..132814199, -
1.33e-29FFCP PHASE1:Hg19::chr7:41728506..41728517,-#_e9349ab790ac68b2e74aa5aca8ede97bp@chr7:41728506..41728517, -
1.33e-29FFCP PHASE2:Hg19::chr7:41728506..41728517,-#_e9349ab790ac68b2e74aa5aca8ede97bp@chr7:41728506..41728517, -
1.33e-29FFCP PHASE2:Hg19::chr11:132814188..132814199,-#_e9349ab790ac68b2e74aa5aca8ede97bp@chr11:132814188..132814199, -
1.78e-29FFCP PHASE1:Hg19::chr7:121090011..121090047,+#_65613c51888fb9a804550c5a62c5b716p@chr7:121090011..121090047, +
1.78e-29FFCP PHASE2:Hg19::chr17:20824335..20824346,+#_65613c51888fb9a804550c5a62c5b716p3@ENST00000443508
1.78e-29FFCP PHASE1:Hg19::chr17:20824335..20824346,+#_65613c51888fb9a804550c5a62c5b716p3@ENST00000443508
1.78e-29FFCP PHASE2:Hg19::chr7:121090011..121090047,+#_65613c51888fb9a804550c5a62c5b716p@chr7:121090011..121090047, +
3.16e-29FFCP PHASE1:Hg19::chr10:92754351..92754372,+#_7b9a5c9a1c1309d1bf00fceb77053591p1@ENST00000412362
3.16e-29FFCP PHASE2:Hg19::chr10:92754351..92754372,+#_7b9a5c9a1c1309d1bf00fceb77053591p1@ENST00000412362
4.2e-29FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_3ec9d1597b9d191ae75328ac643ff096p10@ITGA8
4.2e-29FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_3ec9d1597b9d191ae75328ac643ff096p10@ITGA8
2.78e-26FFCP PHASE1:Hg19::chr18:11174068..11174093,+#_bba9229bfb8e83c5096edd73e8c769a3p@chr18:11174068..11174093, +
2.78e-26FFCP PHASE2:Hg19::chr18:11174068..11174093,+#_bba9229bfb8e83c5096edd73e8c769a3p@chr18:11174068..11174093, +
3.58e-26FFCP PHASE2:Hg19::chr5:142000713..142000743,-#_6c45dd69ab7d5541ce41919de87e6addp@chr5:142000713..142000743, -
3.58e-26FFCP PHASE1:Hg19::chr5:142000713..142000743,-#_6c45dd69ab7d5541ce41919de87e6addp@chr5:142000713..142000743, -
5.93e-26FFCP PHASE2:Hg19::chr7:141730415..141730422,+#_b7529d3bcc518fd10e60dd8a2d4b4732p@chr7:141730415..141730422, +
5.93e-26FFCP PHASE1:Hg19::chr7:141730415..141730422,+#_b7529d3bcc518fd10e60dd8a2d4b4732p@chr7:141730415..141730422, +
5.93e-26FFCP PHASE1:Hg19::chr2:72742814..72742824,-#_b7529d3bcc518fd10e60dd8a2d4b4732p10@EXOC6B
5.93e-26FFCP PHASE2:Hg19::chr2:72742814..72742824,-#_b7529d3bcc518fd10e60dd8a2d4b4732p10@EXOC6B
9.79e-26FFCP PHASE1:Hg19::chr2:72800462..72800468,-#_8ded922631f997d97b0620e94694f42cp@chr2:72800462..72800468, -
9.79e-26FFCP PHASE2:Hg19::chr2:72800462..72800468,-#_8ded922631f997d97b0620e94694f42cp@chr2:72800462..72800468, -
1.26e-25FFCP PHASE2:Hg19::chr1:172972632..172972638,+#_5e7915d993509f00c7bb1e07efbdcc09p@chr1:172972632..172972638, +
1.26e-25FFCP PHASE1:Hg19::chr1:172972632..172972638,+#_5e7915d993509f00c7bb1e07efbdcc09p@chr1:172972632..172972638, +
1.34e-23FFCP PHASE2:Hg19::chr6:72313706..72313717,+#_ebbf1731ca50c8694f92a2f8886b1095p2@BC038189
1.34e-23FFCP PHASE1:Hg19::chr6:72313706..72313717,+#_ebbf1731ca50c8694f92a2f8886b1095p2@BC038189
1.67e-23FFCP PHASE2:Hg19::chr8:122625230..122625248,-#_f02f6f3868db9bc740e7dd6e731f86cdp@chr8:122625230..122625248, -
1.67e-23FFCP PHASE2:Hg19::chr16:17198879..17198884,-#_f02f6f3868db9bc740e7dd6e731f86cdp@chr16:17198879..17198884, -
1.67e-23FFCP PHASE1:Hg19::chr16:17198879..17198884,-#_f02f6f3868db9bc740e7dd6e731f86cdp@chr16:17198879..17198884, -
1.67e-23FFCP PHASE1:Hg19::chr8:122625230..122625248,-#_f02f6f3868db9bc740e7dd6e731f86cdp@chr8:122625230..122625248, -
2.62e-23FFCP PHASE2:Hg19::chr17:62658220..62658231,-#_7ee4711e4cfcdca1b308591896e18f25p6@SMURF2
2.62e-23FFCP PHASE1:Hg19::chr17:62658220..62658231,-#_7ee4711e4cfcdca1b308591896e18f25p6@SMURF2
2.62e-23FFCP PHASE2:Hg19::chr22:32352399..32352412,+#_7ee4711e4cfcdca1b308591896e18f25p28@YWHAH
2.62e-23FFCP PHASE1:Hg19::chr22:32352399..32352412,+#_7ee4711e4cfcdca1b308591896e18f25p28@YWHAH
2.62e-23FFCP PHASE2:Hg19::chrX:69308514..69308559,+#_7ee4711e4cfcdca1b308591896e18f25p@chrX:69308514..69308559, +
2.62e-23FFCP PHASE1:Hg19::chrX:69308514..69308559,+#_7ee4711e4cfcdca1b308591896e18f25p@chrX:69308514..69308559, +
3.28e-23FFCP PHASE2:Hg19::chr17:20824400..20824414,+#_4dae0b90e711a5524a00edcbf71d1facp4@ENST00000443508
3.28e-23FFCP PHASE1:Hg19::chr17:20824400..20824414,+#_4dae0b90e711a5524a00edcbf71d1facp4@ENST00000443508
4.1e-23FFCP PHASE1:Hg19::chr11:7991573..7991621,+#_ca598177c9ee6821875e9f5bc74892d7p4@EIF3F
4.1e-23FFCP PHASE2:Hg19::chr9:94245773..94245784,-#_ca598177c9ee6821875e9f5bc74892d7p@chr9:94245773..94245784, -
4.1e-23FFCP PHASE2:Hg19::chr11:7991573..7991621,+#_ca598177c9ee6821875e9f5bc74892d7p4@EIF3F
4.1e-23FFCP PHASE1:Hg19::chr9:94245773..94245784,-#_ca598177c9ee6821875e9f5bc74892d7p@chr9:94245773..94245784, -
1.88e-21FFCP PHASE1:Hg19::chr11:86106336..86106348,+#_8b5ac92e1028c90cfbbcfe557e6d520cp7@CCDC81
1.88e-21FFCP PHASE1:Hg19::chr1:86049332..86049343,+#_8b5ac92e1028c90cfbbcfe557e6d520cp@chr1:86049332..86049343, +
1.88e-21FFCP PHASE2:Hg19::chr11:86106336..86106348,+#_8b5ac92e1028c90cfbbcfe557e6d520cp7@CCDC81
1.88e-21FFCP PHASE2:Hg19::chr1:86049332..86049343,+#_8b5ac92e1028c90cfbbcfe557e6d520c+, p@chr1:86049332..86049343
2.82e-21FFCP PHASE2:Hg19::chr8:122653259..122653278,+#_eecba91b3471a2db9ab68b7a2e84f9a1p4@HAS2-AS1
2.82e-21FFCP PHASE2:Hg19::chr5:14145687..14145698,+#_eecba91b3471a2db9ab68b7a2e84f9a1p@chr5:14145687..14145698, +